• Title/Summary/Keyword: Chum

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Cloning and DNA Sequences Anaylsis of Mitochondrial NADH Dehydrogenase Subunit 3 from Korean Chum Salmon, Oncorhynchus keta (한국산 연어의 미토콘드리아 NADH Dehydrogengse Subunit 3 영역의 클로닝 및 DNA 염기서열 분석)

  • CHOI Yoon-Sil;LEE Youn-Ho;JIN Deuk-Hee
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.36 no.2
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    • pp.94-99
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    • 2003
  • Mitochondrial DNAs has been used frequently as genetic markers for the population genetic studies of salmonid fishes. Samples used in this experiment were chum salmons (Oncorhynchus keta) from Korea. We analyzed variation of mitochondrial NADH dehydrogenase subunit 3 gene (ND3) among 4 individuals of the Korea population. Genomic DNA was extracted from the liver of the chum salmon samples. Then, the ND3 gene was amplified by polymerase chain reaction (PCR) including the 3' region of cytochrome oxidase III gene (COIII) and the 5` region of NADH dehydrogenase subunit 4L gene (ND4L). The size of the PCR product was 752 Up and the sequences showed some genetic variation among those four individuals. Genetic variations were observed in 7 sites as single nucleotide polymorphism (SNP). Within the open reading frame of the ND3 gene which encodes 116 amino acids, 5 nucleotide substitutions were found. Both transitional and transversional changes occurred more frequently with transitional changes. Comparison of these sequences with the others of a Japanese chum salmon in GenBank showed 5 sites of SNPs. This study provided the basic information of SNP in ND3 gene among Korean chum salmons and demonstrated the possible use of the SNP data as a genetic marker.

Construction Methodology for Chum-Sung-Dae Validation through the Present Configuration (첨성대 건립에 대한 시공방법론 첨성대의 얼개를 통한 논증)

  • Kim, Jang Hoon;Park, Sang Hun
    • Korean Journal of Heritage: History & Science
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    • v.42 no.2
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    • pp.40-61
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    • 2009
  • A new construction methodology has been proposed on a scientific basis to reason a rational explanation for the structure and the present configuration of Chum-Sung-Dae. This is because there is no way to otherwise explain the gap between our expectation that the people in Shilla are assumed to be and the problems, such as the use of a temporary supporting structure including falsework, the use of a conveying device for stonework and the practice of soil fill, raised when the construction method in nowadays is applied to the structure. Furthermore, it is because the questions, such as the difference of an azimuth angle between the southward opening and the square podium, the skewed circular plan in layers of the body, misalignment between neighboring layers of the body, disagreement between the inclination due to slight sidesway and the eccentricity in each layer of the circular body, perfectly aligned vertical and horizontal joints and the existence of soil fill, raised from the present configuration of Chum-Sung-Dae, also require a reasonable explanation based on scientific evidences, if any. Therefore, the proposed new construction methodology, in which the soil hill outside as well as the soil fill inside the Chum-Sung-Dae may have been utilized as a temporary scaffolding system for construction, is the highly probable one that the builders of Chum-Sung-Dae might have inevitably employed. The existence of great tombs, scattered in Hwang-Nam-Dong close to Chum-Sung-Dae, implies that the people of Shilla might have accepted the proposed new construction methodology as a natural one.

The Distribution and Migration Boundary Lines of Oncorhynchus keta in the Milyang River (연어(Oncorhynchus keta)의 밀양강 분포 및 소상 한계선 파악)

  • Hong, Donghyun;Seong, Ki Baik;Ko, Eui-Jeong;Jung, Eunsong;Jo, Hyunbin;Joo, Gea-Jae
    • Korean Journal of Ecology and Environment
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    • v.53 no.4
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    • pp.445-452
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    • 2020
  • In this study, we carried out a distribution and migration boundary lines of chum salmon (Oncorhynchus keta) in the Milyang River. We measured the total length of dead chum salmons. As a results, 40 chum salmons were found during the study period, 25 dead salmons and 15 alive individuals. The ratio of female was 64%. We verified the migration boundary lines of chum salmons based on a sighting survey until detecting a structure that chum salmons are not able to migrate upstream. We discovered that chum salmons were not able to migrate up to 13 km in a mainstream of the Milyang River and up to 12 km in the Danjang stream (a tributary of the Milayang River) from upstream of the Yerim Bridge. Therefore, our results indicate that Milyang River should improve a river connectivity by demolishing weirs that disturb chum salmon's migration or installing appropriate fishways. Also, effective legislations are needed to retain naturality in spawning ground and micro-habitats to increase the survival rate of parrs and smolts.

Climate Variability and Chum Salmon Production in the North Pacific (북태평양 기후변화와 연어 생산력 변동)

  • Kim, Su-Am;Kang, Su-Kyung;Seo, Hyun-Ju;Kim, Eun-Jung;Kang, Min-Ho
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.12 no.2
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    • pp.61-72
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    • 2007
  • The relationship between North Pacific chum salmon (Oncorhynchus keta) population and climate variability was investigated in the North Pacific ecosystem. Time-series for the Aleutian Low Pressure, Southern Oscillation, Arctic Oscillation, and Pacific Decadal Oscillation (PDO) indices dating back to 1950 are compared with the chum salmon catch using a cross-correlation function (CCF) and cumulative sum (CuSum) of anomalies. The results of CCF and CuSum analyses indicated that there was a major change in climate during the mid 1970s, and that the chum salmon population responded to this climate event with a time-lag. The PDO and chum salmon returns showed a highly significant correlation with a time-lag of 3 years, while the AOI with a time-lag of $6{\sim}7$ years. The favorable environments for fry chum salmon might cause better growth in the coastal areas, but higher growth rate during the early stage does not seem to be related to the improved return rate of spawning adults. Rather, growth in the Okhotsk Sea or the Bering Sea during immature stages has a significant correlation with return rate, which implies the size-related mortality process. The development of a local climate index is necessary to elucidate the effect of climate variability on the marine ecosystem around the Korean Peninsula.

History and Status of the Chum Salmon Enhancement Program in Korea (연어 방류사업의 역사와 현황)

  • Lee, Hae-Sung;Seong, Ki-Baik;Lee, Cheul-Ho
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.12 no.2
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    • pp.73-80
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    • 2007
  • The chum salmon enhancement program in Korea started at Gowon in Hamgyeong nam-do in 1913 and the program has been more active since Yeongdong Inland Fisheries Research Institute was established at Yangyang in 1984. The major activities were the release of chum salmon fingerlings and the catch of adult chum salmon for artificial fertilization. The range of return rate to Korean waters was in $0.72{\sim}1.57%$ during 1990s, but it has declined seriously since 2000. To overcome the low return rate and enhance chum salmon resources in Korean waters, we must understand the mechanisms of mass mortality of chum salmon during their early life in rivers and coastal areas in conjuction with the fluctuation of return rates and climate. In addition, comprehensive and effective habitat protection and restoration policies will be needed.

Genetic Analysis of Asian Chum Salmon Populations Based on Microsatellite DNA Variation

  • Yoon, Moon-Geun;Abe, Syuiti;Jin, Deuk-Hee
    • Fisheries and Aquatic Sciences
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    • v.10 no.4
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    • pp.186-190
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    • 2007
  • We examined the genetic variability of Asian chum salmon (Oncorhynchus keta) populations using nuclear microsatellite (ms) DNA analysis with four polymorphic loci (OKM4, OKM5, OKM7, and OKM8) in 397 individuals from nine populations, including one in Korea, seven in Japan, and one in Russia. The msDNA gene diversity was highest in the Japanese populations, suggesting greater genetic variation in the populations in Japan than in populations in Korea and Russia. The pairwise $F_{ST}$ estimates based on our msDNA data showed that the Korean population was genetically different from the Japanese and Russian populations, and there were higher $F_{ST}$ estimates between Hokkaido and Honshu populations than between other population pairs. A neighbor-joining tree showed that the Korean population was distinct from two other clusters, representing the populations in Honshu and the populations in Hokkaido and Russia. These results suggest that the observed population genetic patterns of Asian chum salmon might be influenced by low or restricted gene flow.

Prevalence and Characterization of Typical Aeromonas salmonicida Chum Salmon Isolates in Korea

  • Kim, Yong-Seok;Yoon, Jang-Won;Han, Hyun-Ja;Suebsing, Rungkarn;Kim, Jeong-Ho
    • Fisheries and Aquatic Sciences
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    • v.14 no.4
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    • pp.347-354
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    • 2011
  • Aeromonas salmonicida is an important fish pathogen commonly associated with furunculosis in salmonids. Typical A. salmonicida strains have the surface virulence A-layer protein, a major virulence determinant encoded by the vapA gene. In this study, 880 chum salmon Oncorhynchus keta were collected from the east coast of Korea during 2006-2011, including 560 wild adults and 320 artificially hatched fry pools, and the presence of typical A. salmonicida was examined by PCR using the typical A. salmonicida-specific vapA gene primers. The results demonstrated that 34.5% of the samples (304/880 samples) were PCR positive, implying that a typical A. salmonicida infection is highly prevalent among chum salmon in Korea. Twenty typical A. salmonicida isolates were recovered based on their brown pigmentation on Trypticase Soy Agar (TSA) plates, which indicates the existence of the A-layer protein. Further biochemical analyses with the four randomly selected typical A. salmonicida isolates revealed some variations in their amino acid decarboxylation and carbohydrate fermentation activity. A phylogenetic analysis based on the entire vapA gene sequence suggested that the A. salmonicida isolates from chum salmon were clustered with those isolated from Atlantic salmon in Europe. Further study is needed to resolve such an interesting relationship in detail.

Genetic Identification of the North Pacific Chum Salmon (Oncorhynchus keta) Stocks (유전적 형질에 의한 북태평양 연어 (Oncorhynchus keta)의 계군 구분)

  • JUNG Woongsic;LEE Youn-Ho;KIM Suam;JIN Deuk-Hee;SEONG Ki Baek
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.36 no.6
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    • pp.578-585
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    • 2003
  • The chum salmon (Oncorhynchus keta) is an anadromous fish distributed all around the North Pacific. Artificial production and release of the juveniles are being made by Korea, Japan, Russia, Canada and the United States. It is important to set up some criteria identifying each stock in order to clarify each nation's right of harvest for the chum salmon resource. As an attempt to build such criteria, we analyzed sequences of a microsatellite DNA Ogo5 and the COIII-ND3-ND4L region of the mitochondrial DNA from chum salmons of Korea, Japan, and the United States. Ogo5 has 4 different alleles: allele A, B-1, B-2, and B-3. Allele B-3 is found only in 3 individuals out of 12 Korea salmons. The Japan salmons have the other 3 alleles and the America salmons have only 2 allots, A and B-1. Heterozygosity index (Ho/He) distinguishes the Korea (1.61) and Japan salmons (1.63) from the America ones (1.09). Seventeen different haplotypes are found in the COIII-ND3-ND4L region from 60 individuals,20 from each stock. The gene genealogy of the haplotypes revealed by TCS program shows that the Korea and Japan salmons are genetically closely linked, but that they are clearly distinguished from the America ones. Ten and eleven individuals of the Korea and Japan salmons have an identical haplotype. Nine individuals of the Korea salmons $(45\%),$ however, are separable from the Japan salmons by their own specific nucleotides. This result presents usefulness of the COIII-ND3-ND4L region as a genetic marker for identification of the chum salmon stocks.

Present Status and Future Prospect in Salmon Research in Korea (한국의 연어생물학 연구 동향과 전망)

  • Kim, Su-Am;Lee, Chae-Sung;Kang, Su-Kyung
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.12 no.2
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    • pp.57-60
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    • 2007
  • Interest in chum salmon(Oncorhynchus keta) biology I Korea has increased since the establishment of the Yangyang Inland Hatchery of the National Fisheries Research and Development Institute during mid 1980s. The enhancement program of chum salmon was expanded thereafter, so that chum salmon were transplanted 18 streams in the coast of the Korean Peninsula. However, ecological research on salmon species was very limited due to the lack of a research program. Though involvement in the North Pacific Anadromous Fish Commission (NPAFC) requires scientific investigation on salmon research of each member nation, no conspicuous increase in research funding was achieved in Korea. Oceanic environments have been rapidly altered by climate change during the last a few decades and ocean ecosystems including salmon populations will be modified by global warming. Special attention is needed for stocks near the southern boundary of distribution, such as Korean chum salmon. This special issue is the venue for reviewing ongoing researches in Korea, and we hope that this issue will be a big step toward active ecological research in Korea under changing environments.

Chum salmon (Oncorhynchus keta)난의 물곰팡이에 대한 하이포아염소산나트륨(Naocl)의 예방 효과

  • Khomvilai, Chutima;Kashiwagi, Masaaki;Sangrungruang, Chanin;Yoshioka, Motoi
    • Korean Aquaculture
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    • v.19 no.1
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    • pp.52-57
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    • 2007
  • Chum salmon의 알이 부화하는 동안 물곰팡이의 감염으로부터 보호하기 위해 알을 10 mg/L 염소농도의 하이포아염소산나트륨(NaOCl) 용액에 매일 15분간 수정란에서부터 발안기까지 처리하였다. 감염된 알의 수 및 발안기 알의 수는 부화 23일째 관찰하였다. 전체의 알에서 감염된 알의 비율은 대조구(11.3;59.3%)보다 NaOCl 처리한 실험구(1.8; 33.4%)에서 유의적으로 낮게 나타났다(P<0.01). 전체 알에 대한 발안란의 비율은 대조구(66.1:97.5%)보다 NaOCl처리한 실험구(85.9:98.6%)에서 유의적으로 우수한 경향을 보였다(P<0.01). NaOCl의 항균 활성은 알의 생존율을 향상시킨다. 따라서 NaOCl는 chum salmon의 난에 대한 물곰팡이의 감염에 대하여 아주 유용한 항균물질이라고 판단된다.

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