• Asian-Australasian Journal of Animal Sciences
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• 제33권11호
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• pp.1824-1836
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• 2020

Objective: On the hypothesis that grazing of cattle prompts organs to secrete or internalize circulating microRNAs (c-miRNAs) in parallel with changes in energy metabolism, we aimed to clarify biological events in adipose, skeletal muscle, and liver tissues in grazing Japanese Shorthorn (JSH) steers by a transcriptomic approach. Methods: The subcutaneous fat (SCF), biceps femoris muscle (BFM), and liver in JSH steers after three months of grazing or housing were analyzed using microarray and quantitative polymerase chain reaction (qPCR), followed by gene ontology (GO) and functional annotation analyses. Results: The results of transcriptomics indicated that SCF was highly responsive to grazing compared to BFM and liver tissues. The 'Exosome', 'Carbohydrate metabolism' and 'Lipid metabolism' were extracted as the relevant GO terms in SCF and BFM, and/or liver from the >1.5-fold-altered mRNAs in grazing steers. The qPCR analyses showed a trend of upregulated gene expression related to exosome secretion and internalization (charged multivesicular body protein 4A, vacuolar protein sorting-associated protein 4B, vesicle associated membrane protein 7, caveolin 1) in the BFM and SCF, as well as upregulation of lipolysis-associated mRNAs (carnitine palmitoyltransferase 1A, hormone-sensitive lipase, perilipin 1, adipose triglyceride lipase, fatty acid binding protein 4) and most of the microRNAs (miRNAs) in SCF. Moreover, gene expression related to fatty acid uptake and inter-organ signaling (solute carrier family 27 member 4 and angiopoietin-like 4) was upregulated in BFM, suggesting activation of SCF-BFM organ crosstalk for energy metabolism. Meanwhile, expression of plasma exosomal miR-16a, miR-19b, miR-21-5p, and miR-142-5p was reduced. According to bioinformatic analyses, the c-miRNA target genes are associated with the terms 'Endosome', 'Caveola', 'Endocytosis', 'Carbohydrate metabolism', and with pathways related to environmental information processing and the endocrine system. Conclusion: Exosome and fatty acid metabolism-related gene expression was altered in SCF of grazing cattle, which could be regulated by miRNA such as miR-142-5p. These changes occurred coordinately in both the SCF and BFM, suggesting involvement of exosome in the SCF-BFM organ crosstalk to modulate energy metabolism.

• 대한화장품학회지
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• 제37권4호
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• pp.319-326
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• 2011

니겔라 사티바(Nigella sativa Linn.) 오일의 미백 효능을 확인하기 위하여 니겔라 사티바 오일 및 오일에서 분리된 유효성분들을 버섯 타이로시네이즈 효소, B16 멜라노마 세포를 이용하여 멜라닌 생성에 관련된 다양한 실험을 실시하였다. B16-F10 멜라노마 세포를 이용한 멜라닌 저해 활성시험 결과에서 니겔라 사티바 오일은 10 mg/mL의 농도에서 약 86 %의 멜라닌 생성을 억제하였으며, RT-PCR과 Western blot을 통한 멜라닌 생성 기작에 대한 영향을 조사한결과, 멜라닌 합성의 주요 단백질인 타이로시네이즈 발현 저해효과가 우수하게 나타났다. 또한, tyrosinase related protein-1 (TRP-1) 및 tyrosinase related protein-2 (TRP-2)의 발현이 억제되는 것을 확인하였다. 따라서, 니겔라 사티바오일은 멜라닌 생합성 저해 효과뿐만 아니라, 멜라닌 합성에 필수적인 효소(타이로시네이즈, TRP-1, TRP-2)의 발현저해를 통해 미백 효과를 나타내는 것으로 확인되었으며, 이에 따라 니겔라 사티바 오일은 멜라닌 생합성을 저해하는미백 소재로 활용할 수 있을 것으로 사료된다.

• Journal of Microbiology and Biotechnology
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• 제16권1호
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• pp.92-101
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• 2006

The bacterial diversity of the bovine rumen was examined using a PCR-based approach. 16S rDNA sequences were amplified and cloned from three fractions of rumen (solid, fluid, and epithelium) that are likely to represent different bacterial niches. A total of 113 clones were sequenced, and similarities to known l6S rDNA sequences were examined. About $47.8\%$ of the sequences had $90-97\%$ similarity to 16S rDNA database sequences. Furthermore, about $62.2\%$ of the sequences were $98-100\%$ similar to 16S rDNA database sequences. For the remaining $6.1\%$, the similarity was less than $90\%$. Phylogenetic analysis was also used to infer the makeup of the bacterial communities in the different rumen fractions. The Cytophaga-Flexibacter-Bacteroides group (CFB, $67.5\%$), low G+C Gram-positive bacteria (LGCGPB, $30\%$), and Proteobacteria $(2.5\%)$ were represented in the rumen fluid clone set; LGCGPB $(75.7\%)$, CFB$(10.8\%)$, Proteobacteria $(5.4\%)$, high G+C Gram-positive bacteria (HGCGPB, $5.4\%$), and Spirochaetes $(2.7\%)$ were represented in the rumen solid clone set; and the CFB group $(94.4\%)$ and LGCGPB $(5.6\%)$ were represented in the rumen epithelium clone set. These findings suggest that the rumen fluid, solid, and epithelium support different microbial populations that may play specific roles in rumen function.

• 한국미생물·생명공학회지
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• 제46권2호
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• pp.102-110
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• 2018

myo-Inositol (MI)을 대사하여 다른 물질로 전환하는 미생물을 과수원 토양으로부터 분리하였다. 분리균 YB-46은 유일한 탄소원으로 MI이 첨가된 배지에서 성장하였고 16S rDNA 염기서열에 따라 Enterobacter 속의 균주로 추정되었다. Fosmid pCC1FOS 벡터를 사용하여 제조된 거대 유전체 은행으로부터 MI을 미지의 대사 물질로 전환하는 Escherichia coli 형질전환주를 선발하였다. 이로부터 플라스미드를 분리하고 삽입된 유전자의 일부 염기서열을 결정한 결과 336 아미노 잔기로 구성된 myo-inositol dehytrogenase (IolG)를 암호화하는 iolG 유전자가 발견되었다. 분리균 YB-46의 IolG는 E. aerogenes와 Bacillus subtilis의 IolG와 약 50% 수준의 상동성을 보였다. 카르복실 말단에 hexahistidine이 연결되도록 제조한 His-tagged IoG (HtIolG)의 유전자를 재조합 대장균에서 발현하여 균체 파쇄액으로부터 HtIolG를 정제하였다. 정제된 HtIolG는 $45^{\circ}C$와 pH 10.5에서 최대 활성을 보였고 MI과 D-glucose에 대한 활성이 가장 높았으며 D-chiro-inositol, D-mannitol 및 D-xylose에도 90% 이상의 활성을 보였다. 최적 반응조건에서 MI을 기질로 하여 반응 동력학적 계수를 측정한 결과 $K_m$과 $V_{max}$가 1.83 mM과 $0.724{\mu}mol/min/mg$로 확인되었다. HtIolG의 활성은 $Zn^{2+}$에 의해 1.7배 증가하였으며, $Co^{2+}$와 SDS에 의해서는 크게 감소하였다.

• 대한화장품학회지
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• 제40권1호
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• pp.89-94
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• 2014

물푸레나무 수피 추출물은 주요 생활성 물질로서 esculetin과 esculin을 포함하고 있다. 이 가운데, Esculetin은 B16F10 melanoma cells에서 $IC_{50}$ value $2.8{\mu}M$의 아주 좋은 melanogenesis 억제 활성을 나타내며, 이를 통해 Melan-A cell에서 melanin 합성을 감소시킨다. 더욱이, esculetin은 mushroom tyrosinase에서도 $IC_{50}$ value $40{\mu}M$의 억제 활성을 나타내어 melanin biosynthesis를 저해한다. 위의 결과들로서, 우리는 melanogenic enzyme 활성 조절에 의해 melanin 생성을 저해하는 효과적인 피부미백 물질로서 esculetin을 제안하고자 한다.

• 대한약침학회지
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• 제16권4호
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• pp.30-35
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• 2013

Objectives: This study was designed to investigate the effects of Calculus Bovis-Fel Uris-Moschus pharmacopuncture (BUM) on the regional cerebral blood flow (rCBF) and the mean arterial blood pressure (MABP) in normal and cerebral ischemic rats and to investigate a possible pathway involved in the effects of BUM. Methods: The changes in the rCBF and the MABP following BUM into Fengfu (GV16) were determined by using a laser-Doppler flow meter and a pressure transducer, respectively. Results: BUM significantly increased the rCBF and decreased the MABP in normal rats in a dose-dependent manner. The effect on the rCBF was significantly inhibited by pretreatment with methylene blue (0.01 mg/kg, intraperitoneal), an inhibitor of guanylate cyclase, but was not affected by pretreatment with indomethacin (1 mg/kg, intraperitoneal), an inhibitor of cyclooxygenase. The BUM-induced decrease of the MABP was changed neither by methylene blue nor by indomethacin pretreatment. In the cerebral ischemic rats, the rCBF was stably increased upon cerebral reperfusion in the BUM group in contrast to the rapid and marked increase in the control group. Conclusion: This study demonstrated that BUM into Fengbu (GV16) increased the rCBF in a dose-dependent manner in the normal state; furthermore, it improved the stability of the rCBF in the ischemic state upon reperfusion. Also, the effects of BUM on the rCBF were attenuated by inhibition of guanylate cyclase, suggesting that the effects involved the guanylate cyclase pathway.

• Journal of Species Research
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• 제13권1호
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• pp.61-66
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• 2024

During an investigation of unrecorded prokaryotic species in Korea, six unrecorded bacterial strains were isolated from soil samples collected from Uljin-gun. Based on a similarity search using the 16S rRNA gene sequence of the isolated strains and the construction of the neighbor-joining phylogenetic tree, five strains were identified to the genus Pseudomonas of the family Pseudomonadaceae, while one strain was identified as a species belonging to the genus Paenibacillus of the family Paenibacillaceae. The details of these unreported species, including gram staining reaction, colony and cell morphology, basic biochemical characteristics, strain ID, and isolation source, are described in the description of the strains.

• 한국미생물·생명공학회지
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• 제39권1호
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• pp.93-96
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• 2011

대장균의 16S rRNA 염기 중 진화적으로 매우 보존되어 있는 B2c 인터브리지의 구성요소 중 하나인 C770염기에 치환을 일으키면 단백질 합성이 저하되는 것으로 알려져 있다. 이 연구에서는 770 위치에 C에서 G로 염기치환(C770G)된 16S rRNA의 기능을 회복시키는 이차복귀돌연변이(secondsite revertant)를 얻기 위해 16S rRNA를 암호화하는 DNA 부분에 무작위로 염기치환을 유발시켜, 재조합 리보솜이 번역하는 CAT mRNA로부터의 단백질 합성능력이 향상된 클론을 선별하였다. 이 실험으로 C770G 염기치환을 가진 변이체 리보솜의 단백질 합성능력을 일부 회복시키는 하나의 이차복귀돌연변이체를 획득하였으며, DNA 염기분석을 통하여 C569G와 U904C 염기치환을 가진 것을 확인하였다. 이러한 연구결과를 이용하여 770 염기가 단백질 합성 과정에서 16S rRNA의 어떤 다른 부분과 결합을 하는지, 또한 그러한 결합으로 이루어지는 구조가 가지게 되는 기능은 무엇인지 등에 대한 리보솜의 구체적인 단백질 합성기작 연구에 도움이 될 것으로 기대한다.

• 화훼연구
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• 제16권4호
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• pp.247-254
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• 2008

덴파레 유묘 및 성묘의 온도, 일장, 생장조절제에 의한 생육 및 개화기 촉진을 목적으로 10시간 및 16시간 일장처리는 3월 24일부터 5월 23일까지 하여 생육 및 개화조사를 하였다. 1년생묘(유묘) 덴파레 'Semi alba'를 온도와 일장처리 결과, $30/25^{\circ}C$로 12주 처리시 생육이 가장 빨랐고, 16시간 일장일 때 신초의 생육과 개화가 촉진되었다. 2년생묘 (성묘) 덴파레 'Candistriape ${\times}$ Tedtakiguz'의 일장처리에서는 16시간 일장에서 소화수, 화폭, 경장 등 개화특성에는 차이가 나지 않았으나, 신초에서부터 개화소요일수는 16시간 일장이 216일, 자연일장 241일, 10시간 일장은 243일로, 16시간 일장이 자연일장이나 10시간일장보다 약 25일 빨랐다. 생장조절제처리는 생장과 개화에 뚜렷한 효과가 없었다.

• Restorative Dentistry and Endodontics
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• 제20권2호
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• pp.577-609
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• 1995

Bacteria have been regarded as one of the most important factors in pulpal and periapical diseases. Streptococci are frequently isolated facultative anaerobes in infected root canals. Recently molecular biological techniques have been rapidly progressed. This study was designed to apply the molecular biological tools to the identification and classification of streptococci in the endodontic microbiology. Streptococci isolated from infected root canals were identified with both Vitek Systems and API 20 STREP. Identification results were somewhat different in several strains of streptococci. Eighteen streptococci and enterococcal was difficult so to digest plasmid DNA using Hind III and EcoRI to differentiate strains by restriction enzyme analysis of plasmid DNA. 16S rDNA of chromosome was amplified by polymerase chain reaction(PCR) and then restricition fragment length polymorphism(RFLP) using several restriction enzymes was observed. The molecular mass of 16S rDNA of chromosomal DNA was approximately 1.4kb. There were three to five RFLP patterns using eight restriction enzymes. RFLP patterns digested with CfoI which recognizes four base sequences were identical in all stains. Hind III which recognizes six base sequences could not digest the 16S rDNA. Restriction enzymes which recognize five base sequences were suitable for RFLP pattern analysis. At least three different restriction enzymes were needed to compare each strains. 16S rDNA PCR-RFLP was simple and rapid to differentiate and classify strains and could be used in the epidemiological study of root canal infections.