• Title/Summary/Keyword: Bio-assessment

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Production and antifungal effect of 3-phenyllactic acid (PLA) by lactic acid bacteria

  • Yoo, Jeoung Ah;Lim, Young Muk;Yoon, Min Ho
    • Journal of Applied Biological Chemistry
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    • v.59 no.3
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    • pp.173-178
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    • 2016
  • Phenyllactic acid (PLA), which is a known antimicrobial compound, can be synthesized through the reduction of phenylpyruvic acid (PPA) by lactate dehydrogenase of lactic acid bacteria (LAB). PLA-producing LAB was isolated from coffee beans, and the isolated LAB was identified as Lactobacillus zeae Y44 by 16S rRNA gene sequence analysis. Cell-free supernatant (CFS) from L. zeae Y44 was assessed for both its capability to produce the antimicrobial compound PLA and its antifungal activity against three fungal pathogens (Rhizoctonia solani, Botrytis cinerea, and Colletotrichum aculatum). PLA concentration was found to be 4.21 mM in CFS when L. zeae Y44 was grown in MRS broth containing 5 mM PPA for 12 h. PLA production could be promoted by the supplementation with PPA and phenylalanine (Phe) in the MRS broth, but not affected by 4-hydroxy-phenylpyruvic acid, and inhibited by tyrosine as precursors. Antifungal activity assessment demonstrated that all fungal pathogens were sensitive to 5 % CFS (v/v) of L. zeae Y44 with average growth inhibitions ranging from 27.8 to 50.0 % (p<0.005), in which R. solani was the most sensitive with an inhibition of 50.0 %, followed by B. cinerea and C. aculatum. However, pH modification of CFS to pH 6.5 caused an extreme reduction in their antifungal activity. These results may indicate that the antifungal activity of CFS was caused by acidic compounds like PLA or organic acids rather than proteins or peptides molecules.

Assessment of Instrument Efficiency in Detecting Airborne Virus (공기 중 바이러스 포집 장비의 효율성 평가)

  • Ha, Tae-Hwan;Lee, In-Bok;Kwon, Kyeong-Seok;Lee, Sung-Bok;Song, Sang-Hyeon;Bitog, Jessie. P.;Yoon, Soon-Seek
    • Journal of The Korean Society of Agricultural Engineers
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    • v.54 no.1
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    • pp.63-72
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    • 2012
  • In livestock industry, damage caused by the epidemic diseases such as Foot-and-Mouth Disease (FMD), Highly-Pathogenic-Avian-Influenza (HPAI) and Porcine-Reproductive-and-Respiratory-Syndrome (PRRS) was very serious. The financial loss incurred from FMD alone which occurred on Nov. 2011 in Korea was estimated at 3 billion won, 23 % of annual livestock industry production. The livestock industry in Korea has greater risk of disease infection because of high density production, etc. Investigating the spread of livestock diseases should consider both direct and indirect contact as well as other various factors including airborne. Airborne infection of livestock disease was first hypothesised in the early 1900s, however, field experimental studies are still limited. Furthermore, no protocol is available in detecting airborne viruses in the field. In this study, effective virus samplers were investigated by comparative analysis of the type of samplers used detect to airborne virus. Laboratory experiments were conducted to compare virus samplers such as Bio-sampler, Dust-sampler, Compact-Cascade-Impactor (CCI) and Microflow in detecting PRRSV. Samples were analyzed by Reverse-Transcription PCR to assess the efficiency of the instrument in detecting the airborne virus. First, samples were classified into five levels according to light intensity of gel images and then the classified results were normalized. In every case, Bio-sampler and Dust-sampler were comparable with each other and have shown to be more effective than CCI and Microflow samplers.

Application of Quantum-dot Nanocrystals for Cyanobacterial Toxin-Microcystin Detection (나노크리스탈 Quantum-dot을 적용한 남조류 독소 Microcystin 탐지 연구)

  • Lee, Jinwook;Yu, Hye-Weon;Kim, In S.
    • Journal of Korean Society on Water Environment
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    • v.23 no.5
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    • pp.705-711
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    • 2007
  • Green quantum-dot nanocrystal (QD525) with anti-microcystin monoclonal antibody was applied for detection of microcystin, a monocyclic peptide hepatotoxin, extracted from the culture of Microcystis aeruginosa. The presence of microcystin in the cell lysate was verified by HPLC analysis with UV absorbance at 238 nm. Microcystis cell extract exhibited fluorescence emission spectra, which peak was around 460 nm because of their complex organic substances. When a spherical QD525 antibody conjugates (10~20 nm in diameter) were bound to the microcystins in the Microcystis cell lysate, the fluorescence intensity of the primary peak at 525 nm diminished while the secondary emission peak at 460 nm slightly increased intensities. It is due to energy transfer from the primary (major) to the secondary (minor) peak, resulting from physical deformation of QD525 and different environmental factors. On the other hand, other cell extracts did not show any fluorescence emission change. This study is very available for detecting and monitoring the microcystin because it is one step assay without washing step and portable spectrophotometer makes on-site measurement possible. For health risk assessment of the microcystin, the reliable and rapid system to detect and quantify microcystin is seriously required.

Estimation of Uncertainty on Greenhouse Gas Emission in the Agriculture Sector (농업분야 온실가스 배출량 산정의 불확도 추정 및 평가)

  • Bae, Yeon-Joung;Bae, Seung-Jong;Seo, Il-Hwan;Seo, Kyo;Lee, Jeong-Jae;Kim, Gun-Yeob
    • Journal of Korean Society of Rural Planning
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    • v.19 no.4
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    • pp.125-135
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    • 2013
  • Analysis and evaluation of uncertainty is adopting the advanced methodology among the methods for greenhouse gas emission assessment that was defined in GPS2000 (Good practice guideline 2000) and GPG-LULUCF (GPG Land Use, Land-Use Change and Forestry). In 2006 IPCC guideline, two approaches are suggested to explain the uncertainty for each section with a national net emission and a prediction value on uncertainty as follows; 1) Spread sheet calculation based on the error propagation algorithm that was simplified with some assumptions, and 2) Monte carlo simulation that can be utilized in general purposes. There are few researches on the agricultural field including greenhouse gas emission that is generated from livestock and cultivation lands due to lack of information for statistic data, emission coefficient, and complicated emission formula. The main objective of this study is to suggest an evaluation method for the uncertainty of greenhouse gas emission in agricultural field by means of intercomparison of the prediction value on uncertainties which were estimated by spread sheet calculation and monte carlo simulation. A statistic analysis for probability density function for uncertainty of emission rate was carried out by targeting livestock intestinal fermentation, excrements treatment, and direct/indirect emission from agricultural lands and rice cultivation. It was suggested to minimize uncertainty by means of extraction of emission coefficient according to each targeting section.

Assessment of Agricultural Drought Using Satellite-based TRMM/GPM Precipitation Images: At the Province of Chungcheongbuk-do (인공위성 기반 TRMM/GPM 강우 이미지를 이용한 농업 가뭄 평가: 충청북도 지역을 중심으로)

  • Lee, Taehwa;Kim, Sangwoo;Jung, Younghun;Shin, Yongchul
    • Journal of The Korean Society of Agricultural Engineers
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    • v.60 no.4
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    • pp.73-82
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    • 2018
  • In this study, we assessed meteorological and agricultural drought based on the SPI(Standardized Precipitation Index), SMP(Soil Moisture Percentile), and SMDI(Soil Moisture Deficit Index) indices using satellite-based TRMM(Tropical Rainfall Measuring Mission)/GPM(Global Precipitation Measurement) images at the province of Chungcheongbuk-do. The long-term(2000-2015) TRMM/GPM precipitation data were used to estimate the SPI values. Then, we estimated the spatially-/temporally-distributed soil moisture values based on the near-surface soil moisture data assimilation scheme using the TRMM/GPM and MODIS(MODerate resolution Imaging Spectroradiometer) images. Overall, the SPI value was significantly affected by the precipitation at the study region, while both the precipitation and land surface condition have influences on the SMP and SMDI values. But the SMP index showed the relatively extreme wet/dry conditions compared to SPI and SMDI, because SMP only calculates the percentage of current wetness condition without considering the impacts of past wetness condition. Considering that different drought indices have their own advantages and disadvantages, the SMDI index could be useful for evaluating agricultural drought and establishing efficient water management plans.

An Assessment on effect of Bioabsorbable membrane, allogenic bone and Platelet Rich Plasma in Class II furcation involvement by digital subtraction radiography (2급 치근이개부 치료 시 흡수성 차폐막, 동종골 이식 및 혈소판 농축 혈장의 골 재생 효과에 대한 디지털 공제술의 정량적 분석)

  • Kim, Sang-Hoon;Lim, Sung-Bin;Chung, Chin-Hyung
    • Journal of Periodontal and Implant Science
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    • v.32 no.1
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    • pp.173-186
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    • 2002
  • The purpose of this study was to evaluate effect of platelet rich plasma on the treatment of Grade II furcation involvement, with Demineralized Freeze-Dried Bone(Dembone(R)) and bioabsorable membrane(BioMesh(R)) in humans by digital subtraction radiography. 12 teeth(control group) were treated with Demineralized Freeze-Dried Bone(Dembone(R)) and bioabsorable membrane(BioMesh(R)), and 12 teeth(test group) were treated with Demineralized Freeze-Dried Bone(Dembone(R)), bioabsorable membrane(BioMesh(R)) and Platelet Rich Plasma. The change of bone density was assessed by digital subtraction radiography in this study. The change of mineral content by as much as 5%(vol) could be perceived in the subtracted images. The change of mineral content was assessed in the method that two radiographs are put into computer program to be overlapped and the previous image is subtracted by the later one. Both groups were statistically analyzed by Wilcoxon signed Ranks Test and Mann-whitney Test using SPSS program (5% significance level). The results were as follows: 1. In test group, the radiopacity in 3 months after surgery were significantly increased than 1 month after surgery(p<0.05). However. there were no significant difference between 1 month after surgery and 3 months after surgery in control group(p>0.05). 2. In test and control group, the radiopacity in 6 months after surgery were significantly increased than 1 month after surgery(p<0.05) 3. In test and control group, the radiopacity in 6 months after surgery were significantly increased than 3 months after surgery(p<0.05). 4. There were no significant difference between test group and control group at 1 month, 3 months after surgery, but radiopacity in test group were significantly increased than control group at 6 months after surgery(p<0.05). In conclusion, Platelet Rich Plasma can enhance bone density.

A Study on Toxicity Bio-markers of a Mouse using Combustion Gas SO2 generated from Fire (마우스(mouse)를 이용한 건축물 마감재료 연소가스 SO2의 독성생체지표 연구)

  • Rie, Dong-Ho;Cho, Nam-Wook;Choi, Soon-Young
    • Journal of the Korea Safety Management & Science
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    • v.14 no.1
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    • pp.43-51
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    • 2012
  • This study was carried out to observe the impacts of a mouse's inhalation of toxic gas SO2 generated from combustion on its organs by different concentrations. As for research methods: First, after concentrations of SO2 generation from combustion had been set to three: low (10.4 ppm), middle (24.9 ppm) and high (122 ppm) through Gas Toxicity Testing Method (KS F 2271) and SO2 combustion gas was exposed to eight mice in each concentration. Five mice that were able to move based on LD50, a criterion, which sets the down time of a mouse's average behaviors to over 9 minutes, were randomly selected in each concentration, and they were set up as the subjects of the study on toxicity bio-markers. Second, tissues were taken from heart, liver, lungs, spleen and the thymus gland of the mice selected in each concentration and a pathological examination of them was carried out. As a result, microvascular congestion appeared in the heart, and cell necrosis, cortex congestion and tubule medulla congestion, etc. in each concentration were observed in addition to vascular congestion in liver, lungs, spleen and the thymus gland. Also, it was found that the higher the concentrations of SO2 exposure is, the greater, the changes in the organs get. Through this study, SO2 of various toxic gases generated from fire turned out to affect the tissues of each organ of a mouse, it is expected that the toxic gases may greatly affect human body in case of actual fire, and this study is evaluated as having a significance as a basic data on inhalation toxicity assessment of toxic substances generated in combustion.

Probability-Based Performance Prediction of the Nuclear Contaminated Bio-Logical Shield Concrete Walls (원전 방사화 콘크리트 차폐벽의 확률 기반 성능변화 예측)

  • Kwon, Ki-Hyon;Kim, Do-Gyeum;Lee, Ho-Jae;Seo, Eun-A;Lee, Jang-Hwa
    • Journal of the Korean Recycled Construction Resources Institute
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    • v.7 no.4
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    • pp.316-322
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    • 2019
  • A probabilistic approach considering uncertainties was employed to investigate the effects on the material characteristics and strength of nuclear bio-logical shield concrete walls, when exposed to long-term radiation during the entire service life. Time-dependent compressive and tensile strengths were estimated by conducting the neutron fluence analysis. For the contaminated concrete, individual compressive and tensile failure probabilities can be possibly evaluated by not only establishing limit-state function withthe predefined critical values but also performing Monte Carlo Simulation. Nuclear power plant types similar to the Kori Unit 1, which was shut off permanently in 2017 after the 40-year operation, were herein selected for an illustrative purpose. Consequently, the probability-based performance assessment and prediction of contaminated concrete walls were well demonstrated.

The development of food image detection and recognition model of Korean food for mobile dietary management

  • Park, Seon-Joo;Palvanov, Akmaljon;Lee, Chang-Ho;Jeong, Nanoom;Cho, Young-Im;Lee, Hae-Jeung
    • Nutrition Research and Practice
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    • v.13 no.6
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    • pp.521-528
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    • 2019
  • BACKGROUND/OBJECTIVES: The aim of this study was to develop Korean food image detection and recognition model for use in mobile devices for accurate estimation of dietary intake. MATERIALS/METHODS: We collected food images by taking pictures or by searching web images and built an image dataset for use in training a complex recognition model for Korean food. Augmentation techniques were performed in order to increase the dataset size. The dataset for training contained more than 92,000 images categorized into 23 groups of Korean food. All images were down-sampled to a fixed resolution of $150{\times}150$ and then randomly divided into training and testing groups at a ratio of 3:1, resulting in 69,000 training images and 23,000 test images. We used a Deep Convolutional Neural Network (DCNN) for the complex recognition model and compared the results with those of other networks: AlexNet, GoogLeNet, Very Deep Convolutional Neural Network, VGG and ResNet, for large-scale image recognition. RESULTS: Our complex food recognition model, K-foodNet, had higher test accuracy (91.3%) and faster recognition time (0.4 ms) than those of the other networks. CONCLUSION: The results showed that K-foodNet achieved better performance in detecting and recognizing Korean food compared to other state-of-the-art models.

Assessing the Potential Impact of Climate Change on Irrigation by Reservoir (농업용 저수지의 농업가뭄에 대한 기후변화 잠재영향 평가)

  • Kim, Soo-Jin;Hwang, Syewoon;Bae, Seung-Jong;Yoo, Seunghwan;Choi, Jin-Yong;Jang, Min-Won
    • Journal of The Korean Society of Agricultural Engineers
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    • v.63 no.6
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    • pp.141-150
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    • 2021
  • In order to assess the impact of climate change on irrigation reservoirs, climate exposure (EI), sensitivity (SI), and potential impact (PI) were evaluated for 1,651 reservoirs nationwide. Climate exposure and sensitivity by each reservoir were calculated using data collected from 2011 to 2020 for seven proxy variables (e.g. annual rainfall) and six proxy variables (e.g. irrigation days), respectively. The potential impact was calculated as the weighted sum of climate exposure and sensitivity, and was classified into four levels: 'Low (PI<0.4)', 'Medium (PI<0.6)', 'High (PI<0.8)', and 'Critical (PI≥0.8)'. The result showed that both the climate exposure index and the sensitivity index were on average high in Daegu and Gyeongbuk with high temperature and low rainfall. About 79.8% of irrigation reservoirs in Daegu, Gyeongbuk, and Ulsan with high climate exposure and sensitivity resulted in a 'High' level of potential impact. On the contrary, 64.5% of the study reservoirs in Gyeongnam and Gangwon showed 'Low' in potential impact. In further studies, it is required to reorganize the proxy variables and the weights in accordance with practical alternatives for improving adaptive capacity to drought, and it is expected to contribute to establishing a framework for vulnerability assessment of an irrigation reservoir.