• 제목/요약/키워드: homology group

검색결과 154건 처리시간 0.025초

Southern Hybridization에 의한 Biphenyl 및 4-Chlorobiphenyl 분해유전자들의 상동성 분석 (Homology Analysis Among the Biphenyl and 4-Chlorobiphenyl Degrading Genes by Southern Hybridization)

  • 남정현;김치경;이재구;이길재
    • 한국미생물·생명공학회지
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    • 제22권1호
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    • pp.37-44
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    • 1994
  • The homology among the genes coding for degradation of bipheny(BP) and 4-chlorobiphenyl(4CB) was comparatively analyzed by Southern hybridization in several BP/4CB degrading bacterial strains. As the hybridization results of their genomic DNAs with pcbABCD as the DNA probe, the group of Pseudomonas sp. DJ-12. P08 and P27 strain was separated by the group of P20 and P1242 strains. The P. pseudoalcaligenes KF707 showed the hybidization signal which was homologous to the group of DJ-12, but they had different restriction endonuclease sites. The pcbAB genes in pCUl recombinant plasmid from Pseudomonas sp. DJ-12 appeared to be homologous to pchAB genes in pKTF20 cloned from P. pseudoalcaligenes KF707, but the C genes in both strains were not homologous. The bphABC in pKTF20 showed the signals homologous to the cbp ACB in pAW6194 cloned from P. putida OU83, but homologous signal was not found botween the pcbABCD genes in pCUl and the cbpADCB genes in pAW6194 recombbinant plasmid.

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ON THE STRUCTURE OF THE FUNDAMENTAL GROUP OF MANIFOLDS WITH POSITIVE SCALAR CURVATURE

  • Kim, Jin-Hong;Park, Han-Chul
    • 대한수학회보
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    • 제48권1호
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    • pp.129-140
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    • 2011
  • The aim of this paper is to study the structure of the fundamental group of a closed oriented Riemannian manifold with positive scalar curvature. To be more precise, let M be a closed oriented Riemannian manifold of dimension n (4 $\leq$ n $\leq$ 7) with positive scalar curvature and non-trivial first Betti number, and let be $\alpha$ non-trivial codimension one homology class in $H_{n-1}$(M;$\mathbb{R}$). Then it is known as in [8] that there exists a closed embedded hypersurface $N_{\alpha}$ of M representing $\alpha$ of minimum volume, compared with all other closed hypersurfaces in the homology class. Our main result is to show that the fundamental group ${\pi}_1(N_{\alpha})$ is always virtually free. In particular, this gives rise to a new obstruction to the existence of a metric of positive scalar curvature.

THE G-SEQUENCE OF A MAP AND ITS EXACTNESS

  • Pan, Ian-Zhong;Shen, Xin-Yao;Woo, Moo-Ha
    • 대한수학회지
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    • 제35권2호
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    • pp.281-294
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    • 1998
  • In this paper, we extend the G-sequence of a CW-pair to the G-sequence of a map and show the existence of a map with nonexact G-sequence. We also give an example of a finite CW-pair with nontrivial $\omega$-homology in high order.

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돼지 유행성 설사 바이러스 국내분리주의 유전학적 특성 규명 (Genetic Characteristics of Porcine Epidemic Diarrhea Virus Isolated in Korea)

  • 지영철;권혁무;정현규;한정희
    • 대한수의학회지
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    • 제43권2호
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    • pp.219-230
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    • 2003
  • Porcine epidemic diarrhea virus(PED), a member of Coronaviridea, is the etiological agent of enteropathogenic diarrhea in swine. The purpose of this study was to investigate genetic characteristic of PEDV isolated in Korea. Nucleocapsid(N) gene and membrane (M) gene of recent Korean PEDV strains isolated in 2001 were amplified, cloned, sequenced and analyzed. N gene of seven Korean PEDV field isolates bad 94.5% to 99.4% nucleotide and 92.4% to 99.4% amino acid sequence homology each other. Nucleotide and amino acid sequences of Korean field PEDVs were different from published foreign PEDVs, showing 95.1% to 98.0% nucleotide and 93.5% to 97.6% amino acid sequence homology. By phylogenetic tree analysis on based nucleotide sequences, PEDVs were clustered into four groups. By phylogenetic tree analysis based on amino acid sequences. PEDVs were clustered into five groups. M gene of our Korean PEDV field isolates had 99.6% to 100% nucleotide and 98.7% to 100% amino acid sequence homology each other. Nuclotide and amino acid sequences of Korean field PEDVs were different from published foreign PEDVs, showing 98.5% to 98.8% nucleotide and 97.3% to 97.8% amino acid sequence homology. By phylogenetic tree analysis based on nucleotide and amino acid sequences, PEDVs were clustered into two groups which were Korean PEDV isolate group and foreign PEDV isolate group.

Nilpotent action by an elementary amenable group and euler characteristic

  • Lee, Jong-Bum;Park, Cnah-Young
    • 대한수학회보
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    • 제33권2호
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    • pp.253-258
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    • 1996
  • Let X be a finite connected CW-complex, $\Gamma = \pi_1(X)$ its fundamental group, $\tilde{X}$ its universal covering space. Then $\Gamma$ acts on $\tilde{X}$ by covering transformations and on the homology group $H_*(\tilde{X})$. In this note we establish the following vanishing result for the Euler characteristic $x(X)$ of X.

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Biodiversity of Bacterial lipase genes

  • Kim, Hyung-Kwoun
    • 한국미생물생명공학회:학술대회논문집
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    • 한국미생물생명공학회 2001년도 Proceedings of 2001 International Symposium
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    • pp.163-164
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    • 2001
  • A number of bacterial species produce extracellular lipases. Among them, many lipase genes have been cloned and sequenced. A comparison of primary sequences revealed only very limited sequence homology among them. Based on the sequence homologies and molecular sizes (Mr), bacterial lipases were classified into four discrete groups. From soil samples taken around Taejon, five different lipase-producing bacteria were isolated; Proteus vulgaris K80, Bacillus stearothermophilus Ll, B. pumilus B26, Staphylococcus haemolyticus L62, S. aureus B56. Nucleotide sequence analysis showed that Staphylococcus lipase genes (L62 and B56) composed of pre-pro-mature parts, Bacillus lipase genes (Ll and B26) pre-mature parts, and Proteus lipase gene (K80) mature part only. In addition, the molecular sizes of their mature parts were quite different from 19,000 to 45,000. Finally, they had very little homology (less than 20%) in their amino acid sequences. Judging from the above results, lipase K80 belonged to bacterial lipase Group I, lipase L1 and lipase B26 Group III, and lipase L62 and lipase B56 Group IV. This diversity in their primary structures was also reflected in their enzymatic properties; temperature effects, pH effects, substrate specificity, detergent effects, and so on.

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THE HOMOLOGY HOMOMORPHISM INDUCED BY HARER MAP

  • Lee, Deogju;Song, Yongjin
    • Korean Journal of Mathematics
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    • 제19권4호
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    • pp.409-421
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    • 2011
  • We study a natural map from the braid group to the mapping class group which is called Harer map. It is rather new and different from the classical map which was studied in 1980's by F. Cohen, J. Harer et al. We show that this map is homologically trivial for most coefficients by using the fact that this map factors through the symmetric group.

CLASSIFICATION OF FREE ACTIONS OF FINITE GROUPS ON 3-DIMENSIONAL NILMANIFOLDS

  • Koo, Daehwan;Oh, Myungsung;Shin, Joonkook
    • 대한수학회지
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    • 제54권5호
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    • pp.1411-1440
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    • 2017
  • We study free actions of finite groups on 3-dimensional nil-manifolds with the first homology ${\mathbb{Z}}^2{\oplus}{\mathbb{Z}}_p$. By the works of Bieberbach and Waldhausen, this classification problem is reduced to classifying all normal nilpotent subgroups of almost Bieberbach groups of finite index, up to affine conjugacy.

생물학적 특성과 DNA분석을 이용한 한국내 Armillaria속균의 분류 (Taxonomic Study of Korean Armillaria Species Based on Biological Characteristics and DNA Analyses)

  • 성재모;양근주;김수호
    • 한국균학회지
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    • 제25권1호통권80호
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    • pp.46-67
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    • 1997
  • 1985년부터 1993년까지 장원도 일대에서 채집한 20균주와 외부에서 분양 받은 6균주를 대상으로 교배실험, PCR-RFLP 분석, 그리고 RAPD분석을 통해 상호 유연 관계를 알고자 하였다. 교배실험에서는 A. gallica 6균주, A. ostoyae 5균주, A. tabescens 2균주만이 친화성을 나타내었다. A8(KNU-250)균주는 A. gallica와 A. ostoyae에 모두 친화성을 나타내어 배양적 특징과 유사한 결과가 나타났다. rDNA의 IGS영역의 PCR-RFLP분석에서 A. mellea와 A. ostoyae 각 균주들 간의 유사도는 1.000으로 100%의 상동성을 보여주었다. A. tabescens는 $0.919{\sim}0.974$로 높은 유사성을 나타냈다. A. gallica는 $0.619{\sim}1.000$의 유사도로 나타났다. A19와 A22균주는 고립된 한 집단으로 나타났으며 유사도는 1.000으로 100% 상동성을 보였고, 다른 집단과의 유사도가 $0.051{\sim}0.108$로 10% 미만의 상동성을 나타내고 있다. RAPD분석을 통한 A. mellea의 유사도는 $0.983{\sim}1.000$으로 상동성이 높게 나타났으며, A. ostoyae도 $0.994{\sim}1.000$으로 높은 상동성을 보여 주었다. A. tabescens의 균주간의 유사도는 $0.594{\sim}0.953$으로 나타났으며, A. gallica는 $0.280{\sim}0.733$의 유사도를 나타내 균주간의 변이가 나타난 것으로 생각된다. 특히, A19, A22균주가 다른 집단과 거리가 먼 한 집단으로 나타났는데 그들 간의 유사도는 0.921로 92%의 상동성을 보였고, 다른 4개 집단과의 유사도가 $0.012{\sim}0.069$로 7% 미만의 상동성을 나타내고 있다. 본 실험에서 분류된 Armillaria속균은 5종으로 4종은 각각 이미 알려진 종으로 A. mellea, A. ostoyae, A. tabescens, A. gallica로 동정되었고 남은 1종은 미기록종이라고 생각된다.

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