• 제목/요약/키워드: endangered genus in Korea

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Distribution of Rhizosphere and Endosphere Fungi on the First-Class Endangered Plant Cypripedium japonicum

  • Gang, Geun-Hye;Cho, Gyeongjun;Kwak, Youn-Sig;Park, Eun-Hee
    • Mycobiology
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    • 제45권2호
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    • pp.97-100
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    • 2017
  • Endangered native plant habitats and populations are rapidly disappearing because of climate and environmental changes. As a representative, the abundance of the first-class endangered wild plant, Cypripedium japonicum, has been rapidly decreasing in Korea. The purpose of this study was to evaluate the distribution of rhizosphere and endophytic fungi on C. japonicum in its native habitat. A total of 440 rhizosphere and 79 endosphere fungi isolates were isolated and identified on the basis of their molecular characteristics. Sixty-five genera and 119 fungi species were identified in this study. The genus Trichoderma showed the highest abundance among both rhizosphere and endosphere fungi. Mortierella, Hypocrea, and Penicillium spp. were also relatively dominant species on C. japonicum. The community structures of rhizosphere and endosphere fungi were similar, but endosphere fungi showed greater diversity.

Complete Chloroplast DNA Sequence from a Korean Endemic Genus, Megaleranthis saniculifolia, and Its Evolutionary Implications

  • Kim, Young-Kyu;Park, Chong-wook;Kim, Ki-Joong
    • Molecules and Cells
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    • 제27권3호
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    • pp.365-381
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    • 2009
  • The chloroplast DNA sequences of Megaleranthis saniculifolia, an endemic and monotypic endangered plant species, were completed in this study (GenBank FJ597983). The genome is 159,924 bp in length. It harbors a pair of IR regions consisting of 26,608 bp each. The lengths of the LSC and SSC regions are 88,326 bp and 18,382 bp, respectively. The structural organizations, gene and intron contents, gene orders, AT contents, codon usages, and transcription units of the Megaleranthis chloroplast genome are similar to those of typical land plant cp DNAs. However, the detailed features of Megaleranthis chloroplast genomes are substantially different from that of Ranunculus, which belongs to the same family, the Ranunculaceae. First, the Megaleranthis cp DNA was 4,797 bp longer than that of Ranunculus due to an expanded IR region into the SSC region and duplicated sequence elements in several spacer regions of the Megaleranthis cp genome. Second, the chloroplast genomes of Megaleranthis and Ranunculus evidence 5.6% sequence divergence in the coding regions, 8.9% sequence divergence in the intron regions, and 18.7% sequence divergence in the intergenic spacer regions, respectively. In both the coding and noncoding regions, average nucleotide substitution rates differed markedly, depending on the genome position. Our data strongly implicate the positional effects of the evolutionary modes of chloroplast genes. The genes evidencing higher levels of base substitutions also have higher incidences of indel mutations and low Ka/Ks ratios. A total of 54 simple sequence repeat loci were identified from the Megaleranthis cp genome. The existence of rich cp SSR loci in the Megaleranthis cp genome provides a rare opportunity to study the population genetic structures of this endangered species. Our phylogenetic trees based on the two independent markers, the nuclear ITS and chloroplast MatK sequences, strongly support the inclusion of the Megaleranthis to the Trollius. Therefore, our molecular trees support Ohwi's original treatment of Megaleranthis saniculifolia to Trollius chosenensis Ohwi.

Germination Characteristics and Seed Dormancy of Iris dichotoma Pall., an Endangered Species Native to Korea

  • Park, Hyeong Bin;Lee, Byoung-Doo;Lee, Chang Woo;Hwang, Jung Eun;Park, Hwan Joon;Kim, Seongjun;An, Jiae;Kim, Pyoung Beom;Kim, Nam Young
    • Proceedings of the National Institute of Ecology of the Republic of Korea
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    • 제2권4호
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    • pp.229-234
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    • 2021
  • Iris dichotoma Pall. found on Daechung Island in Korea has been designated as an endangered species. To aid in conservation efforts of this species, this study investigated its germination characteristics and seed dormancy type. Four sets of seeds were incubated at different temperatures (4/1℃, 15/6℃, 20/10℃, and 25/15℃). One set of seeds was cold stratified (4 weeks at 4/1℃). The final germination rate and mean germination time showed that the optimal germination temperature was 25/15℃. Final germination rates were ~70%, showing no significant difference among temperature treatments. However, mean germination time were significantly different among all temperature treatments except for 4/1℃. Mean germination time for seeds with temperature treatments of 15/6℃, 20/10℃, and 25/15℃ were 3.2, 2.1, and 1.5 weeks, respectively. At 25/15℃, the mean germination time was half of that at 15/6℃. Seeds of I. dichotoma had fully developed embryos at the time of dispersal. No additional growth of the embryo was observed. Cold stratification did not affect the final germination rate or the mean germination time. This study shows that seeds of I. dichotoma have no physiological or morphological dormancy, unlike other members of the Iris genus known to have seed dormancy that needs a relatively high incubation temperature (≥25/15℃) for mass propagation to occur. These results will be useful for understanding ecophysiological mechanisms related to the species' habitat. They are also useful for mass propagation of I. dichotoma for the purpose of conserving this endangered species.

DNA Barcoding of the Marine Proteced Species Pseudohelice subquadrata (Decapoda, Varunidae, Pseudohelice) from the Korean Waters

  • Kim, Ji Min;Kim, Jong-Gwan;Kim, So Yeon;Choi, Woo Yong;Kim, Hyung Seop;Kim, Min-Seop
    • Animal Systematics, Evolution and Diversity
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    • 제36권3호
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    • pp.228-231
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    • 2020
  • Pseudohelice subquadrata (Dana, 1851) is endangered due to its restricted habitat; hence, it has been designated as a marine protected species and endangered species by law in Korea. It has been recorded only Jeju-do and Geomun-do, Republic of Korea. The present study, is the first report on a cytochrome c oxidase subunit I DNA barcode for P. subquadrata. The maximum intra-specific genetic distance among all P. subquadrata individuals was found to be 0.5%, whereas inter-genetic distance within the same genus was 17.2-21.5% compared with Helice tientsinensis (Rathbun, 1931), H. tridens (De Haan, 1835), H. epicure (Ng et al., 2018), and Helicana wuana (Rathbun, 1931). Our barcoding data can thus be used as reference for restoration and conservation studies on P. subquadrata, which are designated as marine protected species.

구룡산과 청옥산 지역의 관속식물상 (Vascular Plants of Guryongsan and Cheongoksan)

  • 임동옥;김용식
    • 한국환경생태학회지
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    • 제15권4호
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    • pp.319-329
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    • 2002
  • 경상북도 구룡산과 청옥산 지역에서 확인된 식물종은 96과 268속 349종 51변종 5품종으로 총 405종류가 확인되었다. 본 조사지역은 식물구계학상 중부아구에 속한다. 희귀 및 멸종위기종으로 6종, 즉 관중, 꽃창포, 천마, 도깨비부채. 꼬리진달래 및 토현삼이 확인되었다.

Cytological Analyses of Iris ruthenica K. Gawl. (Iridaceae), an Endangered Species in Korea

  • Choi, Bokyung;Temsch, Eva M.;Weiss-Schneeweiss, Hanna;So, Soonku;Myeong, Hyeon-Ho;Jang, Tae-Soo
    • 한국자원식물학회:학술대회논문집
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    • 한국자원식물학회 2019년도 추계학술대회
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    • pp.24-24
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    • 2019
  • Iris L. is a perennial genus comprising approximately 300 species worldwide, with the greatest number of endemic species occurring in Asia. Iris is one of the largest genera in the family Iridaceae and includes ca. 15 species native to Korea. Although chromosome number change, karyotype restructuring, and genome size variation play an important role in plant genome diversification, understanding the karyotype variation in Korean Iris species has been hampered by the wide range of base chromosome number (x = 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 22) reported to date. This study documents the chromosome numbers, karyotype structure and genome size variation in Iris ruthenica K. Gawl., an endangered species in Korea obtained using classic Feulgen staining and flow cytometry. The chromosome number of all investigated plants from the nine populations was 2n = 42. All individuals studied possessed metacentric and submetacentric chromosomes. The genome size of the I. ruthenica in eight wild populations ranged from 2.39 pg/1C to 2.45 pg/1C ($2.42{\pm}0.02pg/1C$: $mean{\pm}SD$). This study provides the first report of genome size variation in Iris ruthenica in Korea. This study lays foundation for cytogenetic further analyses employing by fluorescence in situ hybridization (FISH) to better understand the chromosomal evolution in this species and in the whole genus.

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문수산.옥석산 일대의 식물상 (Vascular Plants of Mt. Munsu and Mt. Okseok)

  • 김혜진;윤충원
    • 환경생물
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    • 제27권2호
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    • pp.164-175
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    • 2009
  • 문수산 옥석산 일대의 식물상을 조사한 결과 관속식물문은 35목 95과 332속 600종 93변종 5품종으로 총 698분류군으로 나타났다. 희귀식물은 12과 14속 14종 2변종 16분류군으로 확인되었으며, 멸종위기식물은 1과 1속 1종 1분류군으로 노랑무늬붓꽃이 나타났고, 특산식물은 23과 34속 39종 5변종의 총 44분류군으로 나타났다. 또한 식물구계학적 특정식물은 I등급 식물이 34과 47속 49종 2변종 51분류군, II등급 식물이 21과 30속 29종 4변종 33분류군, III등급 식물이 19과 21속 27종 1변종 28분류군, IV등급 식물이 11과 12속 11종 1변종 12분류군, V등급 식물이 1과 1속 1종 1분류군으로 총 125분류군이었다. 그러나 조사지역에서 발견된 약모밀(Houttuynia cordata)은 식재된 것으로 판단되었다. 귀화식물은 9과 22속 26종 1변종 27분류군이 확인되었으며, 귀화율은 3.9%로 나타났다.

백두대간 만복대.고리봉.수정봉 일대의 관식물상 (Vascular Plants of Manbokdae, Goribong and Suieongbong in the Baekdudaegan)

  • 임동옥;김용식;박양규;유윤미
    • 한국환경생태학회지
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    • 제16권4호
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    • pp.387-403
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    • 2003
  • 여원재에서 만복대 사이 백두대간에 해당되는 지역에 분포하는 식물상을 조사한 결과 104과 305속 439종 60변종 3품종 총 502종류로 확인되었다. 산림청이 지정한 회귀 및 멸종위기종은 구름송이풀, 구상나무 금마타리, 께묵, 눈향나무(식), 땅나리. 목련(식). 산작약. 뻐꾹나리. 금강제비꽃의 총 10종류와 환경부의 자연환경보전법에 의한 멸종위기 및 보호야생식물종은 보춘화 1종류가 조사되었다. 한국특산식물 종은 개나리(식), 구상나무, 금마타리, 꽃마리, 나비나물, 노각나무, 말채나무, 병꽃나무, 분취, 뻐꾹나리, 일월비비추, 할미밀망 등의 총 24종류가 확인되 었다.

Chromosome numbers of eight taxa of Aconitum L. in Korea and their systematic significance (Ranunculaceae)

  • Chung, Kyong-Sook;Nam, Bomi;Park, Myung Soon;Eom, Jeong Ae;Oh, Byoung-Un;Chung, Gyu Young
    • 식물분류학회지
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    • 제41권3호
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    • pp.215-222
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    • 2011
  • Various aneuploidy and polyploidy have been reported in the genus Aconitum L. (ca. 300 species worldwide, Ranunculaceae), and there is a demonstrated association between major lineage diversification and polyploidy. This study reports chromosome counts of eight Aconitum from Korea, including the first counts for A. japonicum Thunb. subsp. napiforme ($H. L{\acute{e}}v.$ & Vaniot) Kadota (2n = 32) and A. longecassidatum Nakai (2n = 16). The study also includes chromosome numbers for two taxa on the Critically Endangered species list in Korea. Among Korean native species, chromosome numbers in Aconitum subgenus Aconitum range from 2n = 16 to 2n = 64 with diverse levels of polyploidy (2x, 4x, and 8x), whereas Aconitum subg. Lycoctonum exhibits only diploids (2n = 16). Greater chromosome number diversity in subg. Aconitum than subg. Lycoctonum might explain higher species diversity within the former subgenus (more than 250 species worldwide). Investigating chromosome number diversity of Aconitum in a phylogenetic framework will be a critical step to understand species richness of the genus.

New Record of Seven Soil Ciliates (Ciliophora: Stichotrichia) from Korea

  • Chae, Kyu-Seok;Kim, Kang-San;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • 제37권3호
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    • pp.212-218
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    • 2021
  • The seven unrecorded ciliates were collected from soil samples in Korea. The morphological study of these ciliates was performed based on observation of both living and stained cells: Rigidocortex quadrinucleatus Bharti, Kumar and La Terza, 2017, Rigidohymena tetracirrata (Gellért, 1942) Berger, 2011, Urosoma salmastra (Dragesco and Dragesco-Kernéis, 1986) Berger, 1999, Urosomoida agilis (Engelmann, 1862) Foissner, 1982, Rigidosticha italiensis Bharti, Kumar and La Terza, 2016, Eschaneustyla terricola Foissner, 1982 and Pseudokeronopsis similis (Stokes, 1886) Borror and Wicklow, 1983. Among the seven genera in this study, the genus Rigidosticha Bharti, Kumar and La Terza, 2016 is firstly reported in Korea. In this study, we provide brief descriptions and remarks for the ciliates with photographs.