• Title/Summary/Keyword: carbon utilization

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Isolation of Bacillus subtilis GS-2 Producing γ-PGA from Ghungkukjang Bean Paste and Identification of γ-PGA (청국장으로부터 분리한 Poly(γ-glutamic acid)를 생산하는 균주 Bacillus subtilis GS-2의 분리 및 γ-PGA의 확인)

  • Bang, Byung-Ho;Jeong, Eun-Ja;Rhee, Moon-Soo;Kim, Yong-Min;Yi, Dong-Heui
    • Journal of Applied Biological Chemistry
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    • v.54 no.1
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    • pp.1-6
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    • 2011
  • ${\gamma}$-PGA(poly-${\gamma}$-glutamic acid) is an unusual anionic polypeptide that is made of D- and L-glutamic acid units connected by amide linkages between ${\alpha}$-amino and ${\gamma}$-carboxylic acid groups. ${\gamma}$-PGA has been isolated from many kinds of organisms. Many Bacillus strains produce ${\gamma}$-PGA as a capsular material of an extracellular viscous material. It is safe for eating as a viscosity element of fermented soybean products such as Chungkookjang and Natto. It is biodegradable, edible and nontoxic toward humans and the environment and its molecular weight varies from ten thousand to several hundred thousand depending on the kinds of strains used. Therefore, potential applications of ${\gamma}$-PGA and its derivatives have been of interest in the past few years in a broad range of industrial fields such as food, cosmetics, medicine, water-treatment, etc. In this study, a bacterium, Bacillus subtilis GS-2 isolated from the Korean traditional seasoning food, Chungkookjang could produce a large amount of ${\gamma}$-PGA with high productivity and had a simple nutrient requirement. Based on carbon utilization pattern and partial 16S rRNA sequence analysis, the GS-2 strain was identified as B. subtilis. The determination of purified ${\gamma}$-PGA was confirmed with thin layer chromatography (TLC), high performance liquid chromatography (HPLC), fourier transform infrared (FT-IR) spectra, and $^1H$-nuclear magnetic resonance ($^1H$-NMR) spectroscopy.

A Study on the Relationships Between the Epiphytic Microbes and the Blight of Porphyra Species from the Coastal Waters of the Yellow Sea, Korea -II. Seasonal Variation of Heterotrophic Bacteria in the Surrounding Seawater of Porphyra Farming Area Near Mokp'o- (서해산 김 엽체상의 미소생물과 김의 병해와의 관계에 대한 연구 -II. 목포 인근 김 양식장 주변해수에서의 종속영양세균의 계절적 변화-)

  • KIM Jeong-Hee;LEE Geon-Hyoung;SHIN Yoon-Keun;KIM Joong-Rae
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.25 no.4
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    • pp.307-313
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    • 1992
  • To study the seasonal variation of heterotrophic bacteria near the surrounding seawater of Porphyra forming area, samples were collected in the intertidal waters of Mokp'o of the Yellow Sea from February to December, 1990. Annual distribution of heterotrophic bacteria ranged from $7.5\times10^2\;to\;1.1\times10^5\;cfu/ml,$ annual distribution of physiological characteristic bacteria ranged from $5.0\times10\;to\;4.34\times10^4\;cfu/ml$ for proteolytic bacteria, from 0 to $1.35\times10^4\;cfu/ml$ for lipolytic bacteria and from 0 to $1.2\times10^4\;cfu/ml$ for amylolytic bacteria. Sixty-five percent of isolates from seawater were rods, and $76.7\%$ of isolates were Gram-negative. Most isolates were mesophiles and showed utilization of various carbon sources such as glucose, maltose, lactose, sucrose and arabinose. Most isolates also showed tolerance to a broad range of salt concentration. Dominant genus in seawater were Flavobacterium spp., in February, Moraxella spp., Acinetobacter spp. in March, Bacillus spp., Chromobacterium spp., Micrococcus spp., Vibrio spp. in July and Chromobacterium spp., Micrococcus spp., Bacillus spp. in November.

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A Study on the Relationships Between the Epiphytic Microbes and the Blight of Porphyra Species from the Coastal Waters of the Yellow Sea, Korea -III. Seasonal Variation of Heterotrophic Bacteria on the Blades of Porphyra Species Near Mokp'o- (서해산 김 엽체상의 미소생물과 김의 병해와의 관계에 대한 연구 -III. 김 엽체상에 부착된 종속영양세균의 계절적 변화-)

  • KIM Jeong-Hee;LEE Geon-Hyoung;LEE Won-Ho;KIM Joong-Rae
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.25 no.4
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    • pp.314-321
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    • 1992
  • To study the seasonal variation of heterotrophic bacteria on the blades of Porphyra species, samples were collected In the intertidal zone near Mokp'o of the Yellow Sea from February to December, 1990 Annual distribution of heterotrophic bacteria on the blades of Porphyra species ranged from $6.9\times10^2\;to\;1.04\times10^5\;cfu/cm^2$ at site 1, and from $9.4\times10^3\;to\;2.93\times10^5\;cfu/cm^2$ at site 2. Average sixty-five percent of isolates from the blades of Porphyra species were rods and $52.1-82.7\%$ of isolates were Gram-negative. Most isolates showed starch hydrolysis$(68\%)$ on March, but showed Poor utilization of carbon sources and no $H_2S$ production. Dominant genus isolated from the baldes of Porphyra species were Alcaligenes spp., Moraxella spp., on March and Micrococcus spp., Moraxella spp., Corynebacterium spp., on November.

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Isolation and Characterization of a Novel Agar-Degrading Marine Bacterium, Gayadomonas joobiniege gen, nov, sp. nov., from the Southern Sea, Korea

  • Chi, Won-Jae;Park, Jae-Seon;Kwak, Min-Jung;Kim, Jihyun F.;Chang, Yong-Keun;Hong, Soon-Kwang
    • Journal of Microbiology and Biotechnology
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    • v.23 no.11
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    • pp.1509-1518
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    • 2013
  • An agar-degrading bacterium, designated as strain $G7^T$, was isolated from a coastal seawater sample from Gaya Island (Gayado in Korean), Republic of Korea. The isolated strain $G7^T$ is gram-negative, rod shaped, aerobic, non-motile, and non-pigmented. A similarity search based on its 16S rRNA gene sequence revealed that it shares 95.5%, 90.6%, and 90.0% similarity with the 16S rRNA gene sequences of Catenovulum agarivorans $YM01^T$, Algicola sagamiensis, and Bowmanella pacifica W3-$3A^T$, respectively. Phylogenetic analyses demonstrated that strain $G7^T$ formed a distinct monophyletic clade closely related to species of the family Alteromonadaceae in the Alteromonas-like Gammaproteobacteria. The G+C content of strain $G7^T$ was 41.12 mol%. The DNA-DNA hybridization value between strain $G7^T$ and the phylogenetically closest strain $YM01^T$ was 19.63%. The genomes of $G7^T$ and $YM01^T$ had an average ANIb value of 70.00%. The predominant isoprenoid quinone of this particular strain was ubiquinone-8, whereas that of C. agarivorans $YM01^T$ was menaquinone-7. The major fatty acids of strain $G7^T$ were Iso-$C_{15:0}$ (41.47%), Anteiso-$C_{15:0}$ (22.99%), and $C_{16:1}{\omega}7c/iso-C_{15:0}2-OH$ (8.85%), which were quite different from those of $YM01^T$. Comparison of the phenotypic characteristics related to carbon utilization, enzyme production, and susceptibility to antibiotics also demonstrated that strain $G7^T$ is distinct from C. agarivorans $YM01^T$. Based on its phenotypic, chemotaxonomic, and phylogenetic distinctiveness, strain $G7^T$ was considered a novel genus and species in the Gammaproteobacteria, for which the name Gayadomonas joobiniege gen. nov. sp. nov. (ATCC BAA-2321 = $DSM25250^T=KCTC23721^T$) is proposed.

Strength Performance Evaluation of Deck Using Reinforced Plastic Connector (강화플라스틱 연결구를 이용한 데크의 내력 성능평가)

  • Song, Yo-Jin;Jung, Hong-Ju;Lee, Dong-Heub;Kim, Kyung-Dae;Hong, Soon-Il
    • Journal of the Korean Wood Science and Technology
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    • v.41 no.1
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    • pp.12-18
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    • 2013
  • Existing wood decks brings out negligent accident because fastener can be pulled-out by cyclic load of pedestrians. When deck and joist are connected, it also causes the problems, which are cracking of wood decks and rapid decay by material of fastener. In this study, strength property of deck unit using reinforced plastic connector made by domestic A company was evaluated. Southern yellow pine (Pinus palustris Miller) were used for deck material. Bending strength of deck units were implemented for fastener type and joist spacing (400, 600 mm). In the result, carbon steel screw into reinforced plastic connector was the best in average bending strength(Joist spacing : 400, 600 mm). In the result of bending strength for joist-width (40, 50, 70, 80 mm), the average maximum bending strength was measured when the joist spacing was 40 mm.

Utilization of Egg-shell for Bread-making (제빵시 난각의 이용에 관한 연구)

  • Kim, Joong-Man;Kim, Yong-Seob;Yang, Hee-Chon;Choi, Yong-Bae
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.18 no.2
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    • pp.160-166
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    • 1989
  • This study was conducted to investigate whether egg-shell may be used as a mineral sourceor leavening agent in breadmaking. In Korea the waste volume of egg shell has been estimated at about 28,694 tons per year. Carbon dioxide generation maxima were established for barking powder$(153{\pm}3ml/g)$, egg-shell(205in reaction with lactic acid) and yeast$(115{\pm}3ml/sugar\;g)$. Gas release time required for each substance to reach $CO_2$ maximum was, for baking powder 7 minutes, for egg-shell 45 mins and for yeast 240 mins. Particle size of egg-shell in breadmaking was suitable more than 20 mesh (-). When egg-shell only was added to the basic formular without including lactic acid, no leavening effect was observed. However, when lactic acid and egg-shell were used together, the leavening effect was more or less equivalent to that of yeast(control). Addition of egg-shell was found to increase calcium content of bread products without noticeable altering flavor, as compared with control. Joint use of egg-shell was organic acids in breadmaking was shown to have potential in time saving, volume increase and yeast saving.

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Effects of Low Air Temperature and Low Radiation Conditions on Yield and Quality of Hot Pepper at the Early Growth Stage (생육 초기의 저온·저일조가 고추의 수량과 품질에 미치는 영향)

  • Wi, Seung Hwan;Lee, Hee Ju;Yu, In Ho;Jang, Yoon Ah;Yeo, Kyung Hwan;An, Se Woong;Lee, Jin Hyong;Kim, Sung Kyeom
    • Journal of Environmental Science International
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    • v.29 no.10
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    • pp.989-996
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    • 2020
  • This study was conducted to determine the effect of low temperature and low radiation conditions on the yield and quality of hot pepper at an early growth stage in Korea. In plastic greenhouses, low temperature, low temperature with covered shading treatments were set 17 to 42 days after transplanting. The pepper growing degree days decreased by 5.5% due to the low temperature during the treatment period. Radiation decreased by 74.7% due to the covered shading. After commencing treatments, pepper plant growth decreased with low temperature and low radiation. Analysis of the yield showed that the first harvest was delayed by low radiation. The cumulative yields of 119 days after transplanting were 1,956, 2,171, and 2,018 g/㎡ for control, low temperature, and low temperature with low radiation respectively. Capsaicin and dihydrocapsaicin concentrations in pepper fruit decreased with low temperature and low radiation. To investigate the photosynthetic characteristics according to the treatment, the carbon dioxide reaction curve was analyzed using the biochemical model of photosynthesis. Results showed that the maximum photosynthetic rate, Vcmax (maximum carboxylation rate), J (electric transportation rate), and TPU (triose phosphate utilization) decreased at low temperatures; the maximum photosynthetic rate, J, and gm (dark respiration rate) were reduced by shading. These results indicate that low temperature and low radiation can retard early growth, yield, and quality, but these can also be recovered 119 days after planting. Based on the results, the yield and quality of pepper can recover from abiotic stresses with proper cultivation.

Enhanced Production of Astaxanthin in Paracoccus haeundaensis Strain by Physical and Chemical Mutagenesis (물리·화학적 돌연변이 유도를 통한 Paracoccus haeundaensis의 astaxanthin 생산량 증대)

  • Seo, Yong Bae;Jeong, Tae Hyug;Choi, Seong Seok;Lim, Han Kyu;Kim, Gun-Do
    • Journal of Life Science
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    • v.27 no.3
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    • pp.339-345
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    • 2017
  • Carotenoids are natural lipid-soluble pigments, which are produced primarily by bacteria, algae, and plants. Many studies have focused on the identification, production, and utilization of natural sources of astaxanthin from algae, yeast, and crustacean byproducts as an alternative to the synthetic pigment, which is mostly used today. The aim of the present study was to identify a mutant of Paracoccus haeundaensis by exposure to UV and ethyl methanesulfonate (EMS). The mutant was then exposed to nutrient stress conditions to isolate an astaxanthin-hyperproducing strain, followed by characterization of the mutant. The survival rate decreased in accordance with an increase in the UV exposure time and an increase in the EMS concentration. A mutant of the original P. haeundaensis strain was identified that showed hyperproduction of astaxanthin following exposure to UV irradiation (20 min) and EMS treatment (0.4 M concentration). The optimal culture conditions for the PUE mutant were $25^{\circ}C$, pH 7-8, and 3% NaCl. The effects of various carbon and nitrogen sources on the growth and astaxanthin production of PUE were examined. The addition of 1% raffinose and 3% potassium nitrate influenced cell growth and astaxanthin production. The selected mutant exhibited an increase of 1.58 folds in astaxanthin content compared to initial wild type strain. A genetically stable mutant strain obtained using mutagen (UV irradiation and EMS treatment) may be a suitable candidate for further industrial scale production of astaxanthin.

Characteristics of Marine Environment and Primary Productivity of Phytoplankton in the Seaweed Bed of Northwestern Coast of Jeju Island During Autumn 2014 (2014년 추계 제주 북서부 해조장에서 해양환경과 식물플랑크톤의 일차생산력 특성)

  • KWON, HYEONG KYU;YANG, HAN SOEB;YOON, YANG HO;CHOI, OK IN;CHOI, IM HO;OH, SEOK JIN
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.20 no.4
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    • pp.180-191
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    • 2015
  • Marine environmental characteristics and primary productivity of phytoplankton were investigated in seaweed bed of northwestern coast of Jeju Island during Autumn, 2014. The trophic state based on dissolved inorganic nitrogen and phosphorus was mesotrophic. The Redfield ratio was less than 16, indicating that nitrogen was the limiting factor for the growth of phytoplankton. Dissolved organic nitrogen and phosphorus accounts for 63 and 46% of the dissolved total nitrogen and phosphorus, respectively. Light utilization efficiency (${\alpha}$) and maximum photosynthetic capacity ($P_m{^B}$) were highest in the Donggwi (third-year marine forest), followed by Gonae (one-year marine forest), Biyangdo (natural seaweed bed) and Geumneung (whitening area). The primary productivity of phytoplankton in the Donggwi, Gonae and Biyangdo also was higher than that in the Geumneung. Although nitrogen is the limiting factor, enriched dissolved organic nitrogen might play an important role to maintain primary productivity. In addition, phytoplankton community through photosynthesis could produce about 14% of phytoplankton carbon in one hour. These results will be able to use the important information for material cycle and ecological valuation of seaweed bed.

Growth Characteristics of a Pyruvate Decarboxylase Mutant Strain of Zymomonas mobilis (Pyruvate decarboxylase 돌연변이 Zymomonas mobilis 균주의 생장 특성 연구)

  • Xun, Zhao;Peter L., Rogers;Kwon, Eilhann E.;Jeong, Sang Chul;Jeon, Young Jae
    • Journal of Life Science
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    • v.25 no.11
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    • pp.1290-1297
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    • 2015
  • Studies of the inactivation of a gene encoding pyruvate decarboxylase, pdc, in an ethanol-producing bacterium, Zymomonas mobilis, identified a mutant strain with 50% reduced PDC activity. To evaluate the possibility of a carbon-flux shift from an ethanol pathway toward higher value fermentation products, including pyruvate, succinate, and lactate, fermentation studies were carried out. Despite attempts to silence pdc expression in the wild-type strain ZM4 using cat-inserted pdc and pdc-deleted homologs by electroporation, the strain isolated showed partial gene activation. Fermentation experiments with the PDC mutant strain showed that the reduced expression level of PDC activity resulted in decreased rates of substrate uptake and ethanol production, together with increased pyruvate accumulation of 2.5 g l-1 , although lactate and succinate concentrations were not significantly enhanced in these modified strains. Despite numerous attempts, no strains were isolated in which complete pdc inactivation occurred. This result indicates that the ethanol fermentation pathway of this bacterium is totally dependent on the activity of the PDC enzyme. To ensure a redox balance of intracellular NAD and NADH levels, other enzymes, such as lactate dehydrogenase for lactate, and enzymes involved in the production of succinic acid, such as pyruvate dehydrogenase (PDH) and malic enzymes, may be needed for their increased end-product production.