• 제목/요약/키워드: animal statistics

검색결과 162건 처리시간 0.021초

Bootstrap simulation for quantification of uncertainty in risk assessment

  • Chang, Ki-Yoon;Hong, Ki-Ok;Pak, Son-Il
    • 대한수의학회지
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    • 제47권2호
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    • pp.259-263
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    • 2007
  • The choice of input distribution in quantitative risk assessments modeling is of great importance to get unbiased overall estimates, although it is difficult to characterize them in situations where data available are too sparse or small. The present study is particularly concerned with accommodation of uncertainties commonly encountered in the practice of modeling. The authors applied parametric and non-parametric bootstrap simulation methods which consist of re-sampling with replacement, in together with the classical Student-t statistics based on the normal distribution. The implications of these methods were demonstrated through an empirical analysis of trade volume from the amount of chicken and pork meat imported to Korea during the period of 1998-2005. The results of bootstrap method were comparable to the classical techniques, indicating that bootstrap can be an alternative approach in a specific context of trade volume. We also illustrated on what extent the bias corrected and accelerated non-parametric bootstrap method produces different estimate of interest, as compared by non-parametric bootstrap method.

Theoretical Peptide Mass Distribution in the Non-Redundant Protein Database of the NCBI

  • Lim Da-Jeong;Oh Hee-Seok;Kim Hee-Bal
    • Genomics & Informatics
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    • 제4권2호
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    • pp.65-70
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    • 2006
  • Peptide mass mapping is the matching of experimentally generated peptides masses with the predicted masses of digested proteins contained in a database. To identify proteins by matching their constituent fragment masses to the theoretical peptide masses generated from a protein database, the peptide mass fingerprinting technique is used for the protein identification. Thus, it is important to know the theoretical mass distribution of the database. However, few researches have reported the peptide mass distribution of a database. We analyzed the peptide mass distribution of non-redundant protein sequence database in the NCBI after digestion with 15 different types of enzymes. In order to characterize the peptide mass distribution with different digestion enzymes, a power law distribution (Zipfs law) was applied to the distribution. After constructing simulated digestion of a protein database, rank-frequency plot of peptide fragments was applied to generalize a Zipfs law curve for all enzymes. As a result, our data appear to fit Zipfs law with statistically significant parameter values.

가축사육의 지역분류와 공간이동에 관한 연구 (Classification of Livestock Raising Area and Spatial Mobility)

  • 김재환;박치호;강희설;곽정훈;최동윤;최희철
    • 한국축산시설환경학회지
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    • 제7권1호
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    • pp.45-56
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    • 2001
  • The following statistics are the results of a survey that analyzed the classification of livestock area and spatial mobility based upon the number of livestock and an area of 151 towns and cities from 1975 to 1995. 1. As a results of analysis about the degree of location concentration using C.V., Korean native cattles (HanWoo) and swines are becoming more centralized while dairies and chickens are becoming decentralized. 2. 49 regions, that is 32.5%, were classified as growing regions, 30 regions (19.9%) were stagnant regions and 72 regions (47.7%) were withering regions. The classification was based upon the calculation according to the numbers of converted grown animals and growth index. Kyonggi-do and Chungchongnam-do, specifically, took up 26.6% and 24.5% of the developing regions which shows that these two regions are the dominant regions for livestock. 3. Kyongsangbuk-do and Chungchongnam-do play significant roles for overall livestock, and Chollanam-do is considering a transition from swines to Korean native cattles and Kyongsangbuk-do is shifting from Korean native cattles to swines.

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Taylor's Power Law and Quasilikelihood

  • Park, Heung-Sun;Cho, Ki-Jong
    • 한국통계학회:학술대회논문집
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    • 한국통계학회 2003년도 추계 학술발표회 논문집
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    • pp.253-256
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    • 2003
  • In ecological studies, animal science, or entomology, the variance of count is considered to have the power of the mean relationship with the mean count as Taylor (1961) presented his famous 'Taylor's Power Law'. In this talk, we are going to review the development of TPL and its extension toward pest management sampling scheme. Different estimation methods are compared. Quasilikelihood approach is suggested to incorporate covariate information. Possible extensions will be discussed.

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Circular regression using geodesic lines

  • Kim, Sung-su
    • Journal of the Korean Data and Information Science Society
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    • 제22권5호
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    • pp.961-966
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    • 2011
  • Circular variables are those that have a period in its range. Their examples include direction of animal migration, and time of drug administration, just to mention a few. Statistical analysis of circular variables is quite different from that of linear variable due to its periodic nature. In this paper, the author proposes new circular regression models using geodesic lines on the surface of the sample space of the response and the predictor variables.

Mice를 이용한 혈액 및 생화학적 특성에 대한 Nitrogen Dioxide의 위해성 평가 (Risk Assessment of Nitrogen Dioxide for Hematological and Biochemical Parameter in Mice)

  • 정성욱;한용수;박흥재
    • 한국환경과학회지
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    • 제16권5호
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    • pp.665-670
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    • 2007
  • 본 연구에서는 실험동물을 이용하여, $NO_2$의 반복적으로 폭로($0.025mg/m^3$, 8h/day /4 weeks)하여, 실험군 및 대조군에서의 혈액학 및 생화학적 요인들의 변화와 상관성을 평가하였 였으며, 그 결과를 요약하면 다음과 같다. $NO_2$의 흡입 폭로로 인한 혈액학적 요인의 변화는 백혈구의 경우 동물실험에서의 폭로군에서 통계적으로 유의하게 증가하였다(p<0.05). hematocrit의 경우 폭로군에서 통계적으로 유의하게 감소하는 경향을 나타내었다. 또한 hemoglobin과 hematocrit는 전혈 중에서 적혈구의 비율을 나타내는 것이므로 3가지 종류 모두 유사한 경향을 나타내었다. methemoglobin의 경우 동물실험에서 폭로군에서 유의하게 증가하였다(p<0.05). 생화학적 요인에 대한 $NO_2$의 영향은 동물실험에서 total protein과 triglyceride이 동물 실험에서의 폭로군에서 감소하였으나 통계적으로 유의하지는 않았다. albumin이 폭로군에서 감소하였고, blood urea nitrogen과 creatinine의 경우 폭로군에서 높은 경향으로 나타났다. uric acid 및 혈청 중 lactate dehydrogenase의 경우 폭로군이 대조군 보다 높은 농도를 나타내어 $NO_2$의 폭로에 의해 호흡기 조직세포 내 이상을 일으킨 것으로 판단된다. 따라서 실내오염물질 중 산화가스의 하나인 $NO_2$에 대한 위해성 평가는 저농도에서의 폭로연구가 장기적이고 지속적으로 이루어져야 할 것으로 사료된다.

일반농가 한우의 도체형질에 관한 유전모수 추정 (Estimation of genetic parameter for carcass traits in commercial Hanwoo steer)

  • 이윤석;이제영
    • Journal of the Korean Data and Information Science Society
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    • 제27권3호
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    • pp.741-747
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    • 2016
  • 본 연구에서는 국가단위 개체모형을 이용하여 일반농가 한우의 도체중, 등심단면적, 등지방두께, 국내지방도에 대한 유전력를 추정하고 이를 국가단위 종모우 선발용 후대검정우 집단의 유전력과 비교하여 일반 한우농가 개량방향에 효율적인 기초자료로 활용하고자 한다. 일반농가 한우 107,020두 중 생산정보와 2008년부터 2012년까지의 도체성적 기록이 정확한 일반농가 한우 5,843두를 대상으로 다형질 개체모형을 사용하여 유전력를 추정하였다. 유전력를 추정하기 위해 도체형질에는 출생년도, 사육지역을 고정효과, 사육일령을 공변량으로 포함하였다. 일반농가 한우의 유전력를 추정한 결과 도체형질에 대한 유전력은 도체중 0.19, 등심단면적 0.17, 등지방두께 0.20, 근내지방도 0.23 이며 국가단위 씨수소 선발용 후대검정우 집단의 유전력에 비해 낮았다. 이는 사육지역의 환경, 암소 유전능력과 사육개월의 차이로 인해 낮게 나타났다. 따라서 본 연구에서도 현재 실시되어지고 있는 국가단위 씨수소 선발용 개체모형에 농가 한우집단에 사용할 수 있는 유전요인을 포함시켜 실용화 개체모형 개발이 시급하다.

Inbreeding affected differently on observations distribution of a growth trait in Iranian Baluchi sheep

  • Binabaj, Fateme Bahri;Farhangfar, Seyyed Homayoun;Jafari, Majid
    • Animal Bioscience
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    • 제34권4호
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    • pp.506-515
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    • 2021
  • Objective: Initial consequence of inbreeding is inbreeding depression which impairs the performance of growth, production, health, fertility and survival traits in different animal breeds and populations. The effect of inbreeding on economically important traits should be accurately estimated. The effect of inbreeding depression on growth traits in sheep has been reported in many breeds. Based on this, the main objective of the present research was to evaluate the impact of inbreeding on some growth traits of Iranian Baluchi sheep breed using quantile regression model. Methods: Pedigree and growth traits records of 13,633 Baluchi lambs born from year 1989 to 2016 were used in this research. The traits were birth weight, weaning weight, six-month weight, nine-month weight, and yearling weight. The contribution, inbreeding and co-ancestry software was used to calculate the pedigree statistics and inbreeding coefficients. To evaluate the impact of inbreeding on different quantiles of each growth trait, a series of quantile regression models were fitted using QUANTREG procedure of SAS software. Annual trend of inbreeding was also estimated fitting a simple linear regression of lamb's inbreeding coefficient on the birth year. Results: Average inbreeding coefficient of the population was 1.63 percent. Annual increase rate of inbreeding of the flock was 0.11 percent (p<0.01). The results showed that the effect of inbreeding in different quantiles of growth traits is not similar. Also, inbreeding affected differently on growth traits, considering lambs' sex and type of birth. Conclusion: Quantile regression revealed that inbreeding did not have similar effect on different quantiles of growth traits in Iranian Baluchi lambs indicating that at a given age and inbreeding coefficient, lambs with different sex and birth type were not equally influenced by inbreeding.

Estimation of heritability and genetic correlation of body weight gain and growth curve parameters in Korean native chicken

  • Manjula, Prabuddha;Park, Hee-Bok;Seo, Dongwon;Choi, Nuri;Jin, Shil;Ahn, Sung Jin;Heo, Kang Nyeong;Kang, Bo Seok;Lee, Jun-Heon
    • Asian-Australasian Journal of Animal Sciences
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    • 제31권1호
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    • pp.26-31
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    • 2018
  • Objective: This study estimated the genetic parameters for body weight gain and growth curve parameter traits in Korean native chicken (KNC). Methods: A total of 585 $F_1$ chickens were used along with 88 of their $F_0$ birds. Body weights were measured every 2 weeks from hatching to 20 weeks of age to measure weight gain at 2-week intervals. For each individual, a logistic growth curve model was fitted to the longitudinal growth dataset to obtain three growth curve parameters (${\alpha}$, asymptotic final body weight; ${\beta}$, inflection point; and ${\gamma}$, constant scale that was proportional to the overall growth rate). Genetic parameters were estimated based on the linear-mixed model using a restricted maximum likelihood method. Results: Heritability estimates of body weight gain traits were low to high (0.057 to 0.458). Heritability estimates for ${\alpha}$, ${\beta}$, and ${\gamma}$ were $0.211{\pm}0.08$, $0.249{\pm}0.09$, and $0.095{\pm}0.06$, respectively. Both genetic and phenotypic correlations between weight gain traits ranged from -0.527 to 0.993. Genetic and phenotypic correlation between the growth curve parameters and weight gain traits ranged from -0.968 to 0.987. Conclusion: Based on the results of this study population, we suggest that the KNC could be used for selective breeding between 6 and 8 weeks of age to enhance the overall genetic improvement of growth traits. After validation of these results in independent studies, these findings will be useful for further optimization of breeding programs for KNC.

Isoeugenol의 넙치(Paralichthys olivaceus)에 대한 진정, 마취 및 독성효과 검토 (Examinations on sedation, anaesthetic and toxic effect of Isoeugenol for olive-flounder (Paralichthys olivaceus))

  • 신기욱;신용승;김영림;이은영;양향희;팔락샤;허남응;연성찬;이희천;오명주;조성준;강승원;정태성
    • 대한수의학회지
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    • 제45권2호
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    • pp.303-309
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    • 2005
  • Olive flounder (Paralichthys olivaceus) is the major mariculture fish in Korea. The annual aquaculture production of olive flounder in Korea during the period of 2003 was 300,000 ton (2002 Statistics, Ministry of Maritime Affairs & Fisheries, Korea Government). Anesthetics is very necessary in aquaculture to minimize stress and damage during harvesting, grading, transportation, spawning induction and handling to fish. In the present study, isoeugenol as new anesthetic in marine fish, especially olive flounder, was examined to know the efficacy and proper concentration. As a result, olive flounder adult was exhibited sedation at 5 ppm at 10 and $15^{\circ}C$, and 7.5 ppm at $20^{\circ}C$, respectively. Anesthesia was required at least 10, 7.5 and 10 ppm at $10^{\circ}C$, $15^{\circ}C$ and at $20^{\circ}C$, respectively. In case of fry, the effect of sedation was observed from 2.5 ppm at $10^{\circ}C$ and 5 ppm at 15 and $20^{\circ}C$, respectively. Anesthesia was observed from 2.5 ppm at $10^{\circ}C$, 5 ppm at 15 and $20^{\circ}C$, respectively. In acute toxicity test, it was impossible to explore $LD_{50}$ with the concentration of isoeugenol adult at $15^{\circ}C$ used, but over immersion volume of 15 ppm at $15^{\circ}C$ was observed mortality in fry. Based on the present study, isoeugenol was identified as a safe and active anesthetic to olive flounder.