• Title/Summary/Keyword: Tetrad

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알칼리 금속 이온과 G-quadruplex 결합체에 대한 수용액상에서의 특성 비교 연구

  • Im, Hye-Ji;Kim, Min-Ju;Ham, Si-Hyeon
    • Proceeding of EDISON Challenge
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    • 2014.03a
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    • pp.29-38
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    • 2014
  • G-quadruplex를 형성하는 DNA연속체는 텔로미어에서 발견된다. 지금까지의 연구 결과에 따르면 G-quadruplex는 다양한 유전질환과 암과의 상관관계가 있으며, 따라서 G-quadruplex에 대한 연구는 제약 개발 분야에서 활발하게 진행되고 있다. G-quadruplex는 두 개 이상의 G-tetrad들이 쌓여서 형성된 복합체를 의미하며, G-tetrad란 4개의 구아닌 염기들이 Hoogsteen의 수소결합 통해, 정사각형의 평면을 이룬 물질을 일컫는다. 이때, 알칼리 금속 이온이 G-quadruplex에서의 G-tetrad 복합체 형성에 중요한 역할을 한다는 선행연구 결과가 있다. 특히, 알칼리 금속 중 $K^+$이 가장 G-quadruplex와 결합을 잘 한다고 알려져 있는데 그 이유에 대한 분자적 관점의 설명이 이루어져 있지 않다. 따라서 본 연구에서는 먼저 G-quadruplex의 기본 구성 단위 구조인 G-tetrad와 알칼리 금속 결합체들의 수용액상에서의 구조적, 열역학적 특징을 정량적으로 비교, 분석하였다. 또한, 양자화학적 방법으로 계산된 수용액 상태에서의 결합구조에 대한 용매화 자유 에너지 계산을 수행하여 G-quadruplex 간의 자기 조립 (self-assembly) 현상을 설명하였다.

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Geochemical Implication of Rare Earth Element Tetrad Effect from a Leucocratic Granite Gneiss in the Imweon Area, Gangwon Province, Korea (강원도 임원지역 우백질 화강편마암에 나타난 희토류원소 테트라드 효과의 지구화학적 의의)

  • Lee, Seung-Gu;Kim, Kun-Han;Song, Yong-Sun;Kim, Nam-Hoon;Park, Kye-Hun
    • The Journal of the Petrological Society of Korea
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    • v.16 no.1 s.47
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    • pp.27-37
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    • 2007
  • Here we discuss a geochemical characterisitc of rare earth element (REE) pattern of a Precambrain leucogranitic gneiss at Imweon, Gangwon Province, Korea. The outcrop includes biotite gneiss xenolith. The leucocratic granite gneiss contacting with biotite gneiss is pegmatitic. However, there is no evidence of contact metamorphism between biotite gneiss and leucocratic-pegmatitic granite gneiss. The leucocratic granite gneiss shows a specific phenomenon of M-type (convex curved) tetrad effect in chondrite-normalized REE patterns with large negative Eu anomaly. The degree of REE tetrad effect in the leucocratic-pegmatitic granitec gneiss is weak and shows partly W-type (concave curved) tetrad effect. The Eu anomaly of leucocratic granite gneiss has close relationship with the degree of tetrad effect as well as Ca/Sr ratio. Our results suggest that the REE tetrad effect from the leucocratic granite gneiss should be formed during differentiation process of granitic magma. We also confirmed that the weathering might affect Eu or Ce anomaly rather than the formation of REE tetrad effect in granitic rock.

Studies on the Effects of Temperature During the Reduction Division and the Grain Filling Stage in Rice Plants I. Effect of Temperature at the Reduction Division Stage in Indica-Japonica Crosses (수도의 감수분열기 및 등숙기에 있어서 온도반응에 관한 연구 제1보 수도 indica $\times$ Japonica품종의 감수분열기에 있어서의 저온의 영향)

  • Kim, Kyu-Chin
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.28 no.1
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    • pp.41-57
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    • 1983
  • The effect of temperature 'during the reduction division stage on the Indica-Japonica rice varieties were studied in artificial temperature-controlled cabinets (Bioclimatic Laboratory). Varieties used were indica-japonica crosses (Suweon 264, Suweon 258, Milyang 29), indica (IR36, Lengkwang) and japonica rice (Jin-heung). The results obtained from this study are summarized as follows. The most sensitive stage to low temperature, the tetrad stage, was observed in each variety with the following auricle distance: Jinheung, -12cm; IR36, -3cm; Suweon264, -9cm; Suweon258, -3cm; Milyang29, -6cm and Lengkwang, +1cm. The tetrad stage occured when the palea elongation was about 50 to 60% of the final palea length at flowering stage in all varieties. The percentage of degenerated spikelets at tetrad as influenced by low-temperature treatment was very low in Jinheung and Lengkwang, but very high in IR36. In indica-japonica crosses only the 7-days treatments had a very high percentage. Between the 4-day and 7-day treatments as well as among all varieties, clear differences were observed in the low temperature induced sterility of 'special spikelets' (upper position grains at tetrad). In the 7-day treatments except in Lengkwang, all varieties showed very high sterility. It appears that the treatments is over the critical limit for treatment. However in the 4-day treatments, the intervarietal differences in sterility were very clear. In Jinheung, sterility was 46.8%; IR36, 67.6%; Suweon264, 60.9%, Milyang29, 62.2%; Lengkwang, 27.8%. A close relationship was observed between fertility and auricle distance. The lowest fertility of special spikelets was at the tetrad stage and the first contraction phase. Before and after the stage there was an increase in fertility. The palea length elongated nearly in a straight line from the spikelet formation stage to flowering. And there was a high correlation between palea length and auricle distance. distance.

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Pollen Morphology of the Genus Rhododendron (Ericaceae) in Korea

  • Park, Joon-Moh;Song, Un-Sook
    • Journal of Korean Society of Forest Science
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    • v.99 no.5
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    • pp.663-672
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    • 2010
  • The pollen morphology of eleven species and three forms of the genus Rhododendron (Ericaceae) in Korea was examined using light, scanning electron and transmission electron microscopy. The pollen grains are grouped in permanent tetrahedral tetrads; viscin threads are present on the tetrads. The hexacolporate tetrads are of tricolporate monads whereby the apertures form in pairs at six points in the tetrad. The exine sculpture pattern is rugulate, scabrate or verrucate on mesocolpium but psilate, rugulate or microscabrate around the aperture on apocolpium. The exine of Korean Rhododendron pollen consists of tectum, columella, foot layer and endexine. The surface of viscin threads is more or less smooth. The threads are sometimes tangled together and occasionally divided into strands. Six types are recognized based on the pollen morphology. The types are: (1) Micranthum-type (rugulate mesocolpium and psilate apcolpium), (2) Tomentosum-type (rugulate mesocolpium and apocolpium), (3) Aureum-type (scabrate mesocolpium and rugulate apocolpium), (4) Brachycarpum-type (scabrate mesocolpium and rod shaped-microscabrate apocolpium), (5) Schlippenbachiitype (scabrate mesocolpium and round-microscabrate apocolpium) and (6) Weyrichii-type (verrucate mesocolpium).

A FULL CHARGE SEPARATION OVER THE TWO SAME CHROMOPHORES IN A PHOTOSYNTHETIC TETRAD

  • Osuka, Atsuhiro;Marumo, Shinji;Okada, Tadashi;Taniguchi, Seiji;Mataga, Noboru;Ohno, Takeshi;Nozaki, Koichi;Yamazaki, Iwao;Nishimura, Yoshinobu
    • Journal of Photoscience
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    • v.4 no.3
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    • pp.113-119
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    • 1997
  • The synthesis and excited-state dynamics are described for a tetrad (ZC - ZP - ZP - I) consisting of zinc chlorin (ZC), zinc porphyrin (ZP), zinc porphyrin (ZP), and pyromellitimide (I), which upon photoexcitation provides a fully charge-separated state (ZC$^+$- P - ZP - l$^- $) with lifetimes of 230 $\mu$s in THF and > 50$ \mu$s in DMF at room temperature via a stepwise electron-transfer relay that has been detected by the ps-time resolved transient absorption spectroscopy.

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Palynotaxonomic Study on the Korean Pyrolaceae (한국산 노루발과(Pyrolaceae)의 화분분류학적 연구)

  • Chung, Gyu-Young;Nam, Gi-Hum;Park, Myung-Soon
    • Korean Journal of Plant Resources
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    • v.20 no.2
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    • pp.193-200
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    • 2007
  • Pollen grains of seven taxa on the family Pyrolaceae, known to be distributed in Korea (Pyrola dahurica(Andreses) Kom., P. incarnata (DC.) Fisch. ex Kom., P. japonica Klenze ex Alefeld, P. minor L., P. renifolia Max., Orthilia secunda (L.) House, Chimaphila japonica Miq.), were examined by the light and the scanning electron microscope in order to evaluate their taxonomic significances. The pollen units of genus Pyrola, Orthilia, Chimaphila were tetrad, monad, polyad respectively. This characteristics was good character for delimiting the genus, and Orthilia secunda (L.) House was more proper scientific name than Pyrola secunda L. based upon this character. Pollen size, tricolporate length, surface sculpturing pattern were different slightly among the treated taxa, and surface sculpturing patterns of Pyrola dahurica, P. incarnate, P. renifolia, Chimaphiza japonica were different from previous reports. Evolutionary trends of pollen grains in Pyrolaceae were inferred from the pollen units and aperture shapes.

Nucleocapsid Amino Acids 211 to 254, in Particular, Tetrad Glutamines, are Essential for the Interaction Between the Nucleocapsid and Membrane Proteins of SARS-Associated Coronavirus

  • Fang, Xiaonan;Ye, Lin-Bai;Zhang, Yijuan;Li, Baozong;Li, Shanshan;Kong, Lingbao;Wang, Yuhua;Zheng, Hong;Wang, Wei;Wu, Zhenghui
    • Journal of Microbiology
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    • v.44 no.5
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    • pp.577-580
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    • 2006
  • GST pull-down assays were used to characterize the SARS-CoV membrane (M) and nucleocapsid (N) interaction, and it was found that the amino acids 211-254 of N protein were essential for this interaction. When tetrad glutamines (Q) were replaced with glutamic acids (E) at positions of 240-243 of the N protein, the interaction was disrupted.

Construction of Schizosaccharomyces pombe spThp1 Null Mutants and its Characterization (분열효모 Schizosaccharomyces pombe에서 spThp1 유전자 결실돌연변이의 제조와 특성 조사)

  • Yoon Jin-Ho
    • Korean Journal of Microbiology
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    • v.42 no.2
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    • pp.149-152
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    • 2006
  • The sp%pl null mutant was constructed to study the function of fission yeast Schizosaccharomyces pombe spThp1, which is homologous to budding yeast Saccharomyces cerevisiae THP1. Tetrad analysis showed that the spThp1 is not essential for vegetative growth. The spThp1 null mutant also showed no massive poly(A)+ RNA export defect. However, spThp1 null is genetically associated with spMex67 null. These results suggest that spThp1 is involved in mRNA export out of the nucleus.

Construction of spSac3 Null Mutants Defective in mRNA Export (mRNA의 핵에서 세포질로의 이동에 관여하는 spSac3 유전자의 결실돌연변이 제조와 특성 조사)

  • Kang Sook-Hee;Yoon Jin-Ho
    • Korean Journal of Microbiology
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    • v.42 no.2
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    • pp.153-155
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    • 2006
  • We constructed the null mutants of fission yeast Schizosaccharomyces pombe spSac3 gene that is homologous to budding yeast Saccharomyces cerevisiae SAC3 involved in mRNA export out of nucleus. Tetrad analysis showed that the spSac3 is essential for vegetative growth. The spSac3 mutants harboring pREP81X-spSac3 plasmid showed poly(A)+ RNA export defect in the presence of thiamine. These results suggest that spSac3 is also involved in mRNA export from the nucleus.

Isolation and Characterization of the Mutants in the Genes Involved in Mating Pheromone Signalling (효모의 mating pheromone 신호전달과정에 관여하는 유전자의 돌연변이 분리 및 분석)

  • Kim, Ji-Hye;Kim, Hwan-Gyu;Jahng, Kwang-Yeop
    • The Korean Journal of Mycology
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    • v.19 no.4
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    • pp.266-275
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    • 1991
  • The gene CDC70 encoding the${\alpha}-subunit$ of G protein has been known to be a component involved in mating pheromone signalling in the yeast, Saccharomyces cerevisiae. To isolate mutations of the genes involved in the signal transduction, Saccharomyces cerevisiae the strain bearing the cdc70-5 mutation was mutagenized to be forced to recover the ability of colony-formation at restrictive temperature, which means the new mutation can suppress the temperature sensitivity of the cdc70-5 phenotypes. Among these suppressors, $sir^-$ and $mat{\alpha}2^{-}$ mutations are excluded because of no relationship to signal transducer. And the selected suppressors were analyzed for the linkage relationships by the tetrad analysis. Out of fifteen suppressors isolated, twelve were classified into four linkage groups, designated as sga1, sga2, sga3, sga4 by the tetrad analysis. The other three genes were determined for the linkage.

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