• 제목/요약/키워드: Species recognition

검색결과 206건 처리시간 0.029초

한국산 무미류에 대한 유전학적 연구 : 청개구리속 2종(Hyla japonira, H. suweonensis)에 대한 mtDNA의 크기 및 제한효소 인식위치의 변이 (Genetic Studies on Korean Anurans: Length and Restriction Site Variation in the Mitochondrial DNA of Tree Frogs, Hyla japonica and H. suweonensis)

  • 이혜영;박창신
    • 한국동물학회지
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    • 제35권2호
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    • pp.219-225
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    • 1992
  • The genetic variation in mitochondrial DNA (mtDNA) was analysed within and between two species of tree frogs. Hyla japonica and H. suweonensis from South Korea. Purified mtDNAs were digested with each of 11 restriction enLvmes which cleave at six base recognition sequences. The genome size of H. iaponica revealed ho types (20.0 $\pm$ 0.3 and 19.6 $\pm$ 0.3 kb) and this difference is explained by either addition or deletion of about 0.4 kb fragment. On the other hand, the genome sire of H. suueonensis was about 19.0 $\pm$ 0.4 kb only. For the analysis, level of fragment homology (F) and nucleotide sequence divergence (p) were estimated from comparisons of digestion profiles. Among four populations of H. iaponica, substantial mean sequence divergence was 0.017 (range 0.001-0.026); between identical types, 0.001 IslilaRl type) and 0.004 (Large type) respectively; between different ones, 0.024 (range 0.023-0.026). The level of sequence divergence between he species was 0.142 (range 0.131-0.146). This result suggested that he species ㅂwere distinctly differentiated species. The divergence time between ko species was estimated 7.1 million years.

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난치성 치주염환자로부터 채취한 치은연하 세균의 구성과 항생제 내성에 관한 연구 (Microbial Composition and Pattern of Antibiotic Resistance in Subgingival Microbial Samples From Patients With Refractory Periodontitis)

  • 장범석
    • Journal of Periodontal and Implant Science
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    • 제30권4호
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    • pp.725-736
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    • 2000
  • It is becoming increasingly apparent that periodontitis consists of mixture of diseases, most of which respond favorably to traditional mechanical therapy. Among these variants of the disease, some appear to be associated with unusual microbial infections and defective host defenses. Many of these fail to respond to conventional treatment. The recognition that some forms of periodontitis are refractory to standard periodontal therapy has given rise to a new classification of peridontitis. A series of 1692 subgingival microbial samples sent to a diagnostic microbiology laboratory included 738 samples that could be identified as compatible with a clinical diagnosis of refractory or recurrent periodontitis. In descending order of prevalence the associated microbiota included Bacteroides forsythus(85%) ,Fusobacterium species(78%), Spirochetes(67%), Campylobacter rectus(64%), Porphyromonas gingivalis(59%), Peptostreptococcus micros(58%), motile rods(46%), Prevotella intermedia(33%), Eikenella corrodens(13%), Capnocytophaga species(12%) ,and Actinobacillus actinomycetemcomitans(6%). Antibiotic resistance to tetracycline, penicillin G, or metronidazole was particularly noticeable for Fusobacterium species, Capnocytophaga species, and Actinobacillus actinomycetemcomitans. It was largely absent for Campylobacter rectus. No antibiotic data were obtained for Porphyromonas gingivalis or Bacteroides forsythus, as these species were detected by immunofluorescence. The results indicate that a substantial number of microorganisms associated with refractory periodontitis are variably resistant to commonly-used antibiotics. Diagnostic microbiology must be considered an essential adjunct to the therapist faced with periodontal lesions refractory to conventional treatment.

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Genetic variation of the endangered species Halenia coreana (Gentianaceae)

  • YUN, Narae;OH, Sang-Hun
    • 식물분류학회지
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    • 제52권1호
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    • pp.45-53
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    • 2022
  • Halenia coreana is an endangered, endemic species that is distributed in only a few locations in Korea, such as Mts. Hwaaksan and Daeamsan. It has been recently segregated from H. corniculata, broadly distributed in cold temperate regions that include northern Japan, the Russian Far East, northeastern China, Mongolia, and eastern Europe, where population sizes are usually large. To examine the genetic diversity of H. coreana and evaluate the level of genetic differentiation of the species compared with that of H. corniculata, we surveyed 183 candidate simple sequence repeats (SSR) motif markers for H. coreana and H. corniculata from sequence data of amplified fragments of a specific length in the genome. A total of 17 genomic-SSR markers were selected to examine the levels of genetic diversity and differentiation using 17 samples of H. coreana and 60 samples of three populations of H. corniculata. The results here suggest that the genetic diversity of H. coreana is very low with a high frequency of inbreeding within its population. We found that H. coreana is genetically differentiated from H. corniculata, supporting the recognition of the geographically isolated H. coreana as a distinct species.

수피 특징 추출을 위한 상용 DCNN 모델의 비교와 다층 퍼셉트론을 이용한 수종 인식 (Comparison of Off-the-Shelf DCNN Models for Extracting Bark Feature and Tree Species Recognition Using Multi-layer Perceptron)

  • 김민기
    • 한국멀티미디어학회논문지
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    • 제23권9호
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    • pp.1155-1163
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    • 2020
  • Deep learning approach is emerging as a new way to improve the accuracy of tree species identification using bark image. However, the approach has not been studied enough because it is confronted with the problem of acquiring a large volume of bark image dataset. This study solved this problem by utilizing a pretrained off-the-shelf DCNN model. It compares the discrimination power of bark features extracted by each DCNN model. Then it extracts the features by using a selected DCNN model and feeds them to a multi-layer perceptron (MLP). We found out that the ResNet50 model is effective in extracting bark features and the MLP could be trained well with the features reduced by the principal component analysis. The proposed approach gives accuracy of 99.1% and 98.4% for BarkTex and Trunk12 datasets respectively.

Taxonomic notes on the genus Alsidium C. Agardh, including the merging of Bryothamnion Kützing (Rhodomelaceae)

  • Garcia-Soto, Gabriela;Lopez-Bautista, Juan
    • ALGAE
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    • 제33권3호
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    • pp.215-229
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    • 2018
  • In this study, the phylogenetic relationships among the genera Alsidium C. Agardh and Bryothamnion $K{\ddot{u}}tzing$ were investigated. Phylogenetic analyses using the plastid-encoded markers rbcL, psbA, and the mitochondrial barcode region (COI-5P) resolved a well-supported clade that included the species Alsidium corallinum, Bryothamnion seaforthii, and B. triquetrum. Our results indicated that taxonomic recognition of the genus Bryothamnion is not supported and two species of Bryothamnion are reallocated to Alsidium. A reexamination of the morphological definition of Alsidium is provided with an updated diagnosis of the genus and a morphology-based comparison of species that are currently circumscribed under this generic name. Furthermore, we reviewed morphological differences and similarities between Alsidium and the genus Digenea, both belonging to the tribe Alsidieae, discussing the most relevant morphological characters.

미국등골나물과 서양등골나물(국화과: 등골나물족)의 분류학적 검토 (A taxonomic note of Ageratina altissima and Eupatorium rugosum (Asteraceae: Eupatorieae))

  • OH, Sang-Hun
    • 식물분류학회지
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    • 제49권3호
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    • pp.261-264
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    • 2019
  • 서양등골나물은 우리나라에서 생태계 교란 생물로 지정된 외래 침입종이다. 북아메리카 동부지역이 원산지인 이 외래 식물에 대해 각각 2개의 학명(Eupatorium rugosum Houtt., Ageratina altissima (L.) R. M. King & H. Rob.)과 국명(서양등골나물 및 미국등골나물)이 혼용되고 있어 분류학적 혼란을 초래하고 있다. 이 논문에서는 이들의 분류학적 실체와 내력을 밝혀 분류학적 혼란을 해결하고자 하였다. 조사 결과, 미국등골나물과 서양등골나물은 동일한 분류군으로서 린네가 Species Plantarum에 Ageratum altissimum으로 처음 기재한 종이다. 이 종은 Eupatorium속으로 전이되어 대체명이 공표되고 이후 Ageratina속으로 전이되었다. 즉, Eupatorium속에서는 전혀 다른 기준표본에 근거해 이미 존재하였던 E. altissimum L. 때문에 대체명으로 E. rugosum이 공표되었고, Ageratina속에서는 종소명 'altissima'를 사용하고 있던 종이 없었기 때문에 원명에 근거해 A. altissima의 학명이 공표되었다. 이러한 과정에서 발표된 이름들이 국내에서는 서로 다른 분류군으로 인식되면서 분류학적 혼란이 야기된 것으로 사료된다. 형태 및 분자 형질을 분석한 연구 결과에 근거해 서양등골나물의 정명은 A. altissima이다.

Quantitative and Pattern Recognition Analyses for the Quality Evaluation of Magnoliae Flos by HPLC

  • Fang, Zhe;Shen, Chang Min;Moon, Dong-Cheul;Son, Kun-Ho;Son, Jong-Keun;Woo, Mi-Hee
    • Bulletin of the Korean Chemical Society
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    • 제31권11호
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    • pp.3371-3381
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    • 2010
  • In this study, quantitative and pattern recognition analysis for the quality evaluation of Magnoliae Flos using HPLC/UV was developed. For quantitative analysis, eleven major bioactive lignan compounds were determined. The separation conditions employed for HPLC/UV were optimized using ODS $C_{18}$ column ($250{\times}4.6\;mm$, $5\;{\mu}m$) with isocratic elution of acetonitrile and water with 1% acetic acid as the mobile phase at a flow rate of 1.0 mL/min and a detection wavelength of 278 nm. These methods were fully validated with respect to the linearity, accuracy, precision, recovery, and robustness. The HPLC/UV method was applied successfully to the quantification of eleven major compounds in the extract of Magnoliae Flos. The HPLC analytical method for pattern recognition analysis was validated by repeated analysis of twenty one reference samples corresponding to seven different species of Magnoliae Flos and nine samples purchased from market. The results indicate that the established HPLC/UV method is suitable for the quantitative analysis and quality control of multi-components in Magnoliae Flos.

Quantitative and Pattern Recognition Analyses for the Quality Evaluation of Cimicifugae Rhizoma by HPLC

  • Fang, Zhe;Moon, Dong-Cheul;Son, Kun-Ho;Son, Jong-Keun;Min, Byung-Sun;Woo, Mi-Hee
    • Bulletin of the Korean Chemical Society
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    • 제32권1호
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    • pp.239-246
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    • 2011
  • In this study, quantitative and pattern recognition analysis for the quality evaluation of Cimicifugae Rhizoma using HPLC/UV was developed. For quantitative analysis, three major bioactive phenolic compounds were determined. The separation conditions employed for HPLC/UV were optimized using ODS $C_{18}$ column ($250{\times}4.6mm$, $5{\mu}M$) with isocratic elution of acetonitrile and water with 0.1% phosphoric acid as the mobile phase at a flow rate of 1.0 mL/min and a detection wavelength of 323 nm. These methods were fully validated with respect to the linearity, accuracy, precision, recovery, and robustness. The HPLC/UV method was applied successfully to the quantification of three major compounds in the extract of Cimicifugae Rhizoma. The HPLC analytical method for pattern recognition analysis was validated by repeated analysis of twelve reference samples corresponding to five different species of Cimicifugae Rhizoma and seventeen samples purchased from markets. The results indicate that the established HPLC/UV method is suitable for the quantitative analysis and quality control of multi-components in Cimicifugae Rhizoma.

Multiplex Polymerase Chain Reaction을 이용한 당귀 종 판별 (Development of Multiplex Polymerase Chain Reaction Assay for Identification of Angelica Species)

  • 김용상;박혁주;이동희;김현규
    • 한국약용작물학회지
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    • 제26권1호
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    • pp.26-31
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    • 2018
  • Background: Angelica gigas, A. sinensis, and A. acutiloba are commercially important in the herbal medicine market, and among them, A. gigas has the highest economic value and price. However, their similar morphological traits are often used for fraud. Despite their importance in herbal medicine, recognition of the differences between Angelica species is currently inadequate. Methods and Results: A multiplex polymerase chain reaction (PCR) method was developed for direct detection and identification of A. gigas, A. sinensis, and A. acutiloba. The gene for the distinction of species was targeted at ITS in the nucleus and trnC-petN gene in chloroplasts. The optimized multiplex PCR in the present study utilized each Angelica species-specific primer pairs. Each primer pair yielded products of 229 base pairs (bp) for A. gigas, 53 bp for A. sinensis, 170 bp for A. acutiloba. Additionally non-specific PCR products were not detected in similar species by species-specific primers. Conclusions: In the present study, a multiplex-PCR assay, successfully assessed the authenticity of Angelica species (A. gigas, A. sinensis, and A. acutiloba). and whole genome amplification (WGA) was performed after DNA extraction to identify, the species in the product. The detection method of raw materials developed in the present study could be applied to herbal medicine and health functional food management.

멸종위기 고산지역 침엽수종 보전가치 평가 (Preservation Value of Endangered Alpine Coniferous Species)

  • 이상현;이동형;변준기
    • 한국산림과학회지
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    • 제112권3호
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    • pp.322-330
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    • 2023
  • 최근 기후변화의 심화가 지속되는 가운데 아고산 침엽수종의 쇠퇴 현상이 뚜렷하게 나타나고 있다. 이에 산림청에서는 고산지역 침엽수 7종에 대해 보전 대책을 수립하고 쇠퇴원인을 파악하고 보전전략 수립방안에 대한 연구가 진행되고 있다. 본 연구는 멸종위기 고산지역 침엽수종 보전전략 수립방안 중 멸종위기 고산지역 침엽수종에 대한 인식과 보전가치 평가를 통해 멸종위기 침엽수종에 대한 보전의 필요성과 가치를 알리기 위한 객관적인 자료를 제시하고자 경제적 가치평가방법인 조건부가치법(CVM, contingent valuation method)을 적용하였다. 멸종위기 침엽수종에 대한 인식과 보전가치 평가를 하기 위해 성별, 연령, 거주지에 대한 인구비례 할당을 통해 2,151명에 대한 설문조사의 결과를 분석하였다. 그 결과, 멸종위기 고산지역 침엽수종 1가구당 보전가치는 49,181원으로 추정되었다.