• Title/Summary/Keyword: S/R

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The List of Korean Organisms Registered in the NCBI Nucleotide Database for Environmental DNA Research (환경유전자 연구를 위한 NCBI Nucleotide 데이터베이스에 등록된 국내 생물 목록 현황)

  • Ihn-Sil Kwak;Chang Woo Ji;Won-Seok Kim;Dongsoo Kong
    • Korean Journal of Ecology and Environment
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    • v.55 no.4
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    • pp.352-359
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    • 2022
  • Recently, with the development of genetic technology, interest in environmental DNA (eDNA) to study biodiversity according to molecular biological approaches is increasing. Environmental DNA has many advantages over traditional research methods for biological communities distributed in the environment but highly depends on the established base sequence database. This study conducted a comprehensive analysis of the habitat status and classification at the genus level, which is mainly used in eDNA (12S rRNA, 16S rRNA, 18S rRNA, COI, and CYTB), focusing on Korean registration taxon groups (phytoplankton, zooplankton, macroinvertebrates, and fish). As a result, phytoplankton and zooplankton showed the highest taxa proportion in 18S rRNA, and macroinvertebrates observed the highest ratio in the nucleotide sequence database in COI. In fish, all genes except 18S rRNA showed a high taxon ratio. Based on the Korean registration taxon group, the gene construction of the top 20 genera according to bio density observed that most of the phytoplankton were registered in 18S rRNA, and the most significant number of COI nucleotide sequences were established in macroinvertebrates. In addition, it was confirmed that there is a nucleotide sequence for the top 20 genera in 12S rRNA, 16S rRNA, and CYTB in fish. These results provided comprehensive information on the genes suitable for eDNA research for each taxon group.

SEMICENTRAL IDEMPOTENTS IN A RING

  • Han, Juncheol;Lee, Yang;Park, Sangwon
    • Journal of the Korean Mathematical Society
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    • v.51 no.3
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    • pp.463-472
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    • 2014
  • Let R be a ring with identity 1, I(R) be the set of all nonunit idempotents in R and $S_{\ell}$(R) (resp. $S_r$(R)) be the set of all left (resp. right) semicentral idempotents in R. In this paper, the following are investigated: (1) $e{\in}S_{\ell}(R)$ (resp. $e{\in}S_r(R)$) if and only if re=ere (resp. er=ere) for all nilpotent elements $r{\in}R$ if and only if $fe{\in}I(R)$ (resp. $ef{\in}I(R)$) for all $f{\in}I(R)$ if and only if fe=efe (resp. ef=efe) for all $f{\in}I(R)$ if and only if fe=efe (resp. ef=efe) for all $f{\in}I(R)$ which are isomorphic to e if and only if $(fe)^n=(efe)^n$ (resp. $(ef)^n=(efe)^n$) for all $f{\in}I(R)$ which are isomorphic to e where n is some positive integer; (2) For a ring R having a complete set of centrally primitive idempotents, every nonzero left (resp. right) semicentral idempotent is a finite sum of orthogonal left (resp. right) semicentral primitive idempotents, and eRe has also a complete set of primitive idempotents for any $0{\neq}e{\in}S_{\ell}(R)$ (resp. 0$0{\neq}e{\in}S_r(R)$).

SOME REMARKS ON PRIMAL IDEALS

  • Kim, Joong-Ho
    • Bulletin of the Korean Mathematical Society
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    • v.30 no.1
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    • pp.71-77
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    • 1993
  • Every ring considered in the paper will be assumed to be commutative and have a unit element. An ideal A of a ring R will be called primal if the elements of R which are zero divisors modulo A, form an ideal of R, say pp. If A is a primal ideal of R, P is called the adjoint ideal of A. The adjoint ideal of a primal ideal is prime [2]. The definition of primal ideals may also be formulated as follows: An ideal A of a ring R is primal if in the residue class ring R/A the zero divisors form an ideal of R/A. If Q is a primary idel of a ring R then every zero divisor of R/Q is nilpotent; therefore, Q is a primal ideal of R. That a primal ideal need not be primary, is shown by an example in [2]. Let R[X], and R[[X]] denote the polynomial ring and formal power series ring in an indeterminate X over a ring R, respectively. Let S be a multiplicative system in a ring R and S$^{-1}$ R the quotient ring of R. Let Q be a P-primary ideal of a ring R. Then Q[X] is a P[X]-primary ideal of R[X], and S$^{-1}$ Q is a S$^{-1}$ P-primary ideal of a ring S$^{-1}$ R if S.cap.P=.phi., and Q[[X]] is a P[[X]]-primary ideal of R[[X]] if R is Noetherian [1]. We search for analogous results when primary ideals are replaced with primal ideals. To show an ideal A of a ring R to be primal, it sufficies to show that a-b is a zero divisor modulo A whenever a and b are zero divisors modulo A.

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Tissue Specific Gene Regulation of The Anthocyanin Synthesis Regulator Gene R in Maize (옥수수의 색소 발현에 관련된 조직 특이성 조절유전자 R locus에 관하여)

  • 임용표
    • Proceedings of the Botanical Society of Korea Conference
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    • 1987.07a
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    • pp.323-347
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    • 1987
  • The R locus of maize in one of several genes that regulate the anthocyanin pigments throughout the body of the plant and seed. The R gene product may regulate pigment deposition by controlling the expression of the flavonoid biosynthetic gene pathway in a tissue-specific manner. To understand the basis for tissue specific regulation and allelic variation at R, the molecular study has been done by cloning a portion of the R complex by transposon tagging with Ac. R specific probe were cloned from the R-nj mutant induced by Ac insertion mutagenesis. From southern analysis of R-r complex using the R-nj probe, the structure of R-r was proposed that R-r containes the three elements, (P)(Q)(S). These elements may organize as the inversion triplication model which (S) sequence was inverted in relation to (P) and (Q). The R-sc derivated from R-mb or R-nj was cloned with R-nj probe, and molecular genetical data showed that R-sc containes tissue specific and tissue nonspecific area, and the sequencing of R-sc are progressed now.

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Molecular Systematics of the Tephritoidea (Insecta: Diptera): Phylogenetic Signal in 16S and 28S rDNAs for Inferring Relationships Among Families

  • Han, Ho-Yeon;Ro, Kyung-Eui;Choi, Deuk-Soo;Kim, Sam-Kyu
    • Animal cells and systems
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    • v.6 no.2
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    • pp.145-151
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    • 2002
  • Phylogenetic signal present in the mitochondrial 16S ribosomal RNA gene (16S rDNA) and the nuclear large subunit ribosomal RNA gene (28S rDNA) was explored to assess their utility in resolving family level relationships of the superfamily Tephritoidea. These two genes were chosen because they appear to evolve at different rates, and might contribute to resolve both shallow and deeper phylogenetic branches within a highly diversified group. For the 16S rDNA data set, the number of aligned sites was 1,258 bp, but 1,204 bp were used for analysis after excluding sites of ambiguous alignment. Among these 1,204 sites, 662 sites were variable and 450 sites were informative for parsimony analysis. For the 28S rDNA data set, the number of aligned sites was 1,102 bp, but 1,000 bp were used for analysis after excluding sites of ambiguous alignment. Among these 1000 sites, 235 sites were variable and 95 sites were informative for parsimony analysis. Our analyses suggest that: (1) while 16S rDNA is useful for resolving more recent phylogenetic divergences, 28S rDNA can be used to define much deeper phylogenetic branches; (2) the combined analysis of the 16S and 28S rDNAs enhances the overall resolution without losing phylogenetic signal from either single gene analysis; and (3) additional genes that evolve at intermediate rates between the 16S and 28S rDNAs are needed to further resolve relationships among the tephritoid families.

Preparation and Characterization of Cobalt(III) Complexes with N,N,N',N'-Tetrakis(2-aminoethyl)-1,2-ethanediamines Ligand (,N,N',N'-Tetrakis(2-aminoethyl)-1,2-ethanediamine형 리간드를 포함하는 코발트 (III) 착물의 합성과 특성)

  • Myung-ki Doh;Byeoung-Su Choi;Chang-Rok An;Junnosuke Fujita
    • Journal of the Korean Chemical Society
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    • v.26 no.5
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    • pp.310-319
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    • 1982
  • Cobalt(III) complexes with sexidentate ligands, N,N,N',N'-tetrakis(2-amino-ethyl)-1,2-ethanediamine (ten), -1,3-propanediamine (ttn), -1,4-butanediamine (ttmd), -(R,R)-and -(R,S)-2,4-pentanediamine (tptn) were prepared, and the characterization of d-d absorption band on the variation of chelate ring size and conformation of these complexes were studied by means of electronic spectra. The first d-d absorption bands of $[Co(L)]^{3+}$ complexes are shifted to smaller wave numbers in the order. ttn > (R,R)-tptn > ten > ttmd${\simeq}$(R,S)-tptn for (L). The UV, $^{13}C$ NMR, and Circular Dichroism studies indicate that the R,S-tptn ligand of $[Co(R,S-tptn)]^{3+}$ complex coodinates to cobalt(Ⅲ) ion as a sexidentate with one methyl group in axial position.

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AFFINENESS OF DEFINABLE Cr MANIFOLDS AND ITS APPLICATIONS

  • Kawakami, Tomohiro
    • Bulletin of the Korean Mathematical Society
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    • v.40 no.1
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    • pp.149-157
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    • 2003
  • Let M be an exponentially bounded o-minimal expansion of the standard structure R = (R ,+,.,<) of the field of real numbers. We prove that if r is a non-negative integer, then every definable $C^{r}$ manifold is affine. Let f : X ${\longrightarrow}$ Y be a definable $C^1$ map between definable $C^1$ manifolds. We show that the set S of critical points of f and f(S) are definable and dim f(S) < dim Y. Moreover we prove that if 1 < s < ${\gamma}$ < $\infty$, then every definable $C^{s}$ manifold admits a unique definable $C^{r}$ manifold structure up to definable $C^{r}$ diffeomorphism.