• Title/Summary/Keyword: 계통학적인 나무

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Analysis of Molecular Diversity in Castanopsis sieboldii with Felt Disease Caused by Septobasidium sp. (Septobasidium sp.에 의한 구실잣밤나무 고약병의 분자학적 다양성 분석)

  • Geon-Woo Lee;Sang-Tae Seo;Byeongjin Cha;Sang-Sub Han
    • Research in Plant Disease
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    • v.29 no.4
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    • pp.420-424
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    • 2023
  • In 2020, within the Dongbaekdongsan area in Jeju Island, a Septobasidium sp. associated with a felt disease in Castanopsis sieboldii (Makino) Hatus. ex T. Yamaz. & Mashiba was identified. The symptom included the presence of brown, thin, and silk-like mycelial mats attached to the tree's bark, displaying variations in size from large to small. To induce hyphal growth, the samples collected were incubated in a moist chamber, and the newly formed hyphae were subjected to genomic DNA extractions. The nucleotide sequences of the internal transcribed spacer and small subunit rDNA genes were determined, and molecular characteristics among the isolates were investigated through polymerase chain reaction-based restriction fragment length polymorphism analysis. This Septobasidium sp. exhibited distinct morphological and phylogenetic features compared to those that were previously reported in South Korea. Consequently, this strain is taxonomically classified as a provisionally novel species of Septobasidium. Furthermore, the observed felt disease exhibited a high degree of host specificity, as it was exclusively identified in C. sieboldii without occurrence in other tree species at the time of observation.

A Report of Eighteen Unrecorded Fungal Species in Korea (국내에서 분리된 미기록 진균 18종 보고)

  • Ahn, Geum Ran;Choi, Min Ah;Kim, Ji Eun;Seo, Eun Ji;Kim, Jun Young;Kim, Seong Hwan
    • The Korean Journal of Mycology
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    • v.45 no.4
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    • pp.292-303
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    • 2017
  • During a survey of culturable fungi in Korea, 18 unrecorded fungal species were isolated and identified from the indoor air of mushroom cultivation houses, the materials used for preparation of mushroom cultivation media, wild plants, and funitures. This study reports the descriptions of the 18 unrecorded fungal species: Aspergillus creber, Ceratocystis paradoxa, Colletotrichum spaethianum, Coniochaeta velutina, Coprinellus xanthothrix, Epicoccum sorghinum, Leptosphaeria rubefaciens, Myrothecium gramineum, Paraconiothyrium fuckelii, Penicillium erubescens, Penicillium melinii, Penicillium pulvillorum, Penicillium sabulosum, Penicillium turbatum, Pestalotiopsis portugalica, Pilidiella castaneicola, Rachicladosporium pini, and Umbelopsis nana. For all the identified species, the morphological characteristics including the features of colony formed on media, images of light microscopy, and molecular phylogenetic relationships based on nucleotide sequences of the internal transcribed spacer ribosomal DNA (ITS rDNA), 18S rDNA, 28S rDNA, ${\beta}-tubulin$ gene, calmodulin gene, and translation elongation factor gene were described.

Systematic Studies on Some Korean Woody Plants - Floral Morphology of Magnoliaceae and Illiciaceae - (한국산 목본식물에 대한 계통분류학적 연구 - 목련과와 붓순나무과의 꽃의형태 -)

  • 선병윤
    • Journal of Plant Biology
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    • v.28 no.4
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    • pp.317-327
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    • 1985
  • Floral morphology of Magnoliaceae and Illiciaceae in Korea is investigated. Magnoliaceae has long and elongate floral axis where numerous stamens and pistils are pistils are spirally arranged, whereas Illiciaceae has short floral axis and pistils are arranged in a single whorl on the axis. The stamens are basically similar in both families; winged and broad filament, prominant connective, long sporangium, and no clear limitation between fertile and sterile parts, which are primitive characters in stamen. The ovaries are the conduplicate type, in both, with decurrent stigma, stigmatic surface confined to stylar position, and no distinct style. Magnoliaceae has one locule and two ovules, whereas Illiciaceae has one locule and one ovule. The ovule is anatropous or hemianatropus, and has bitegmic integument and crassinucellate nucellus.

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Phylogenetic characterization of bacterial populations in different layers of oak forest soil (상수리나무림의 토양 층위별 세균군집의 계통학적 특성)

  • Han, Song-Ih
    • Korean Journal of Microbiology
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    • v.51 no.2
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    • pp.133-140
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    • 2015
  • We have examined the correlation between the physicochemical and microbiological environment variables for the different layers of oak forest soil in Mt. Gyeryong, Korea. The result shows that there is a high correlation in the environment variables between the soil parameters of the fermented (F) layer and humus (H) layer. In particular, the pH level in the F layer shows a high correlation with C and N, while the various organic acids of the H layer turns out to be closely correlated with soil bacteria density. As we evaluated phylogenetic characteristics of bacterial populations by DGGE analysis with DNA extracted. Total of 175 bands including 43 bands from litter (L) layer, 42 bands from F layer, 43 bands from H layer and 47 bands from rhizosphere (A) layer were selected as the major DGGE band of oak forest soil. Based on the 16S rRNA gene sequences, 175 DGGE bands were classified into 32 orders in 7 phylum. The heat map was analyzed in order to compare the quantity of the base sequences of each order and based on the clustering of the different layers of oak forest soil, the result confirms that the F layer and H layer belong to a different cluster from that of L layer and A layer. Furthermore, it also showed that approximately 50% of the total microbial population in different layers is ${\alpha}$-proteobacteria, which indicates that they belong to the dominant system group. In particular, Rhizobiales, Burkholderiales and Actinobacteriales were observed in all the seasons and layers of oak forest soil, which confirms that they are the indigenous soil bacterial community in oak forest soil.

A Systematic Study of the Theaceae 6 Species in Korea (한국산(韓國產) 차나무과(科) 6종(種)의 계통(系統) 분류학적(分類學的) 연구(硏究))

  • Kim, Sam Sik;Lee, Jeong Hwan
    • Journal of Korean Society of Forest Science
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    • v.82 no.4
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    • pp.431-440
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    • 1993
  • This study was carried out to clarify a taxonomical relationships of the Korean Theaceae using characters from morphological, anatomical, electrophoretic and numerical methods. The results are summarized as follows ; Morphological data were cluster analysis by Euclidean distance, the complete and average linkage cluster were most distinctly classified into subfamily level. At the principal components analysis(PCA), the commutative contribution rate of three principal components showed to 91.1% total variance. By the leaf venation were classified semicraspedromous type of Theoideae and brochidodromous type of Ternstroemioideae. The stomatal types were classified Paracytic of Theoideae and Anomocytic type of Ternstroemioideae ; the former has founded subsideary cell the latter has not found. All taxa possessed common isozyme bands did not found out of Theaceae banding patterns. But, the activity of Theoideae were existed in below No.5(Rf. 4.0-4.4), in contrast to Ternstroemioideae were existed in more than No.7(Rf. 5.7-6.2). The cluster analysis of leaf characters and peroxidase isozymes were similarity between two methods.

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Prediction of Distribution Changes of Carpinus laxiflora and C. tschonoskii Based on Climate Change Scenarios Using MaxEnt Model (MaxEnt 모델링을 이용한 기후변화 시나리오에 따른 서어나무 (Carpinus laxiflora)와 개서어나무 (C. tschonoskii)의 분포변화 예측)

  • Lee, Min-Ki;Chun, Jung-Hwa;Lee, Chang-Bae
    • Korean Journal of Agricultural and Forest Meteorology
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    • v.23 no.1
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    • pp.55-67
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    • 2021
  • Hornbeams (Carpinus spp.), which are widely distributed in South Korea, are recognized as one of the most abundant species at climax stage in the temperate forests. Although the distribution and vegetation structure of the C. laxiflora community have been reported, little ecological information of C. tschonoskii is available. Little effort was made to examine the distribution shift of these species under the future climate conditions. This study was conducted to predict potential shifts in the distribution of C. laxiflora and C. tschonoskii in 2050s and 2090s under the two sets of climate change scenarios, RCP4.5 and RCP8.5. The MaxEnt model was used to predict the spatial distribution of two species using the occurrence data derived from the 6th National Forest Inventory data as well as climate and topography data. It was found that the main factors for the distribution of C. laxiflora were elevation, temperature seasonality, and mean annual precipitation. The distribution of C. tschonoskii, was influenced by temperature seasonality, mean annual precipitation, and mean diurnal rang. It was projected that the total habitat area of the C. laxiflora could increase by 1.05% and 1.11% under RCP 4.5 and RCP 8.5 scenarios, respectively. It was also predicted that the distributional area of C. tschonoskii could expand under the future climate conditions. These results highlighted that the climate change would have considerable impact on the spatial distribution of C. laxiflora and C. tschonoskii. These also suggested that ecological information derived from climate change impact assessment study can be used to develop proper forest management practices in response to climate change.

A Systematic Study of Korean Rutaceae(I) - Mainly Treated with Venation and Stomatal Type - (한국산(韓國産) 운향과(芸香科)의 계통분류학적(系統分類學的) 연구(硏究)(I) - 엽맥(葉脈)과 기공형태(氣孔形態)를 중심(中心)으로 -)

  • Lee, Jeong Hwan;Kim, Sam Sik
    • Journal of Korean Society of Forest Science
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    • v.82 no.3
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    • pp.260-270
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    • 1993
  • This study was carried out to clarifyed a taxonomical relationships of Rutaceae on the subfamily, genus and species level in Korea using venation pattern and stomata types. The results are summarized as follows : The leaf venation of the Rutaceae has revealed three major venation types. Semicraspedodromous, Brochidodromous and Cladodromous. The leaf ufmations type of the genus Evodia and Phellodendron were similar to Cladodromous type. They showed gradual evolution from brochidodromous type of Aurantioideae to cladodromous type of Toddaloideae. The stomata ypes were reconized Anomocytic and Actinocytic type, and epidermal cells were Ansio. Polygonal and Medium type. In the correlation analysis, there were highly significant correlation between frequency and length (r=-0.822), frequency and width (r=-0.780), and length and width(r=0.909) at 1% level.

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Occurrence of Stone Fruit Viruses on Peach Trees (Prunus persica L. Batsch) in Korea (국내에서 발생하는 복숭아 바이러스병)

  • Cho, In Sook;Cho, Jeom Doeg;Choi, Seung Kook;Choi, Gug Seoun
    • Research in Plant Disease
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    • v.18 no.4
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    • pp.391-395
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    • 2012
  • To investigate the occurrence of viruses in peach, leaf samples were collected from peach trees in commercial orchard of six areas in Korea. Reverse transcription polymerase chain reaction (RT-PCR) was used to identify the presence of the following stone fruit viruses: Apple chlorotic leaf spot virus (ACLSV), Apple mosaic virus (ApMV), Prune dwarf virus (PDV), Prunus necrotic ringspot virus (PNRSV) and Plum pox virus (PPV). About 65.0% of the 515 samples were infected with ACLSV and PNRSV. Virus-like symptoms showing mosaic on leaves was observed in ACLSV infected peach trees. However, PNRSV infected peach trees showed no symptoms. These viral DNAs by sequence analysis were confirmed 4 ACLSV isolates and 3 PNRSV isolates. The Korean peach isolates of ACLSV and PNRSV showed 70-99% and 88-99% amino acid sequence identities, respectively, with those reported previously and their amino acid sequence identities with each other were approximately 95% and 88%, respectively. Phylogenetic analysis indicated that the Korean ACLSV isolates belong to the A group of ACLSV. The Korean PNRSV isolates reported in this study were grouped into I (PV32), II (PV96) and III (PE5) groups.

First Report of Rust Disease on Fringe Tree by Puccinia sp. and Its Alternative Host (Puccinia sp.에 의한 이팝나무 잎녹병 발생 및 중간기주 보고)

  • Yu, Nan Hee;Park, Ae Ran;Yoon, Hyeokjun;Son, Youn Kyoung;Lee, Byoung-Hee;Kim, Jin-Cheol
    • Research in Plant Disease
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    • v.26 no.3
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    • pp.179-182
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    • 2020
  • In July 2018, a serious rust symptom was found throughout the fringe trees planted in Gangjin-gun, Korea. Yellow and brown spots were observed on the adaxial (topside) surface of the collected fringe tree leaves, and yellow color aecia were observed on the abaxial (underside) surface leaves. The size of aeciospore and urediniospores of JCK-KCFR1 strain were measured to 41.2 ㎛ (Φ) and 28.84 ㎛ (Φ) with a light microscope. Phylogenetic analysis of the small subunit rRNA, internal transcribed spacer, and large subunit rRNA region indicated that JCK-KCFR1 strain is novel species of the genus Puccinia and closely related to Puccinia kusanoi, which has been reported a rust pathogen on bamboo. In May 2019, rust symptoms were also discovered on the bamboo leaves planted around the fringe tree on Muwisa-ro, and their telia and teliospores were observed on the abaxial leaf surfaces of the bamboo with 100% sequence homology with the rust of the fringe tree. This is the first report that Puccinia sp. JCK-KCFR1 is a new species that requires both primary (fringe tree) and alternative (bamboo) host plants to complete its life cycle in Korea.

Selection of a Triploid Poplar by Flow Cytometric Analysis and Growth Characteristics of its in vitro Grown Plants (유세포 분석을 통한 현사시나무 3배체 선발 및 계통별 기내생장 특성)

  • Bae, Eun-Kyung;Lee, Hyoshin;Lee, Jae-Soon;Noh, Eun-Woon
    • Journal of Korean Society of Forest Science
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    • v.101 no.2
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    • pp.291-296
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    • 2012
  • Triploids are a useful tool for biomass production and molecular breeding of trees with a long life span. Triploids of the poplar 'Hyunsasi' (Populus alba ${\times}$ P. glandulosa) have been developed by crossing between female diploids and a male tetraploid. The tetraploid was developed around the 1970s at Korea Forest Research Institute by colchicine-induced chromosome doubling. Seedlings of the $F_1$ generation were analyzed using flow cytometry to verify their ploidy status. The mean relative fluorescence index of 3 F1 poplars, labeled as Line- 1, Line-17, Line-18, were approximately 1.5 times higher than those of diploid poplars, and the results clearly indicated that they were triploids. The phenotype of the F1 poplars included larger leaves and thicker stem than diploids, and abnormal leaf morphology, especially in the triploid 'Line-18'. Three triploid lines developed roots more slowly and had less roots than diploid. However, 3 poplar cytotypes (2x, Line-1, Line-17) rooted within 10 days on MS medium. In contrast, compared with the 3 cytotypes, the Line-18 showed about 80% and 70% in the rooting rate and the number of roots. The triploid poplars could be directly utilized for biomass production and with their sterility, they could serve as basic material for genetic transformation. In addition, flow cytometric analysis proved to be an effective and reliable method for screening forest trees for their ploidy level.