• Title/Summary/Keyword: wild life

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Metagenomic Analysis of the Fecal Microbiomes of Wild Asian Elephants Reveals Microflora and Enzymes that Mainly Digest Hemicellulose

  • Zhang, Chengbo;Xu, Bo;Lu, Tao;Huang, Zunxi
    • Journal of Microbiology and Biotechnology
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    • v.29 no.8
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    • pp.1255-1265
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    • 2019
  • To investigate the diversity of gastrointestinal microflora and lignocellulose-degrading enzymes in wild Asian elephants, three of these animals living in the same group were selected for study from the Wild Elephant Valley in the Xishuangbanna Nature Reserve of Yunnan Province, China. Fresh fecal samples from the three wild Asian elephants were analyzed by metagenomic sequencing to study the diversity of their gastrointestinal microbes and cellulolytic enzymes. There were a high abundance of Firmicutes and a higher abundance of hemicellulose-degrading hydrolases than cellulose-degrading hydrolases in the wild Asian elephants. Furthermore, there were a high abundance and a rich diversity of carbohydrate active enzymes (CAZymes) obtained from the gene set annotation of the three samples, with the majority of them showing low identity with the CAZy database entry. About half of the CAZymes had no species source at the phylum or genus level. These indicated that the wild Asian elephants might possess greater ability to digest hemicellulose than cellulose to provide energy, and moreover, the gastrointestinal tracts of these pachyderms might be a potential source of novel efficient lignocellulose-degrading enzymes. Therefore, the exploitation and utilization of these enzyme resources could help us to alleviate the current energy crisis and ensure food security.

Establishment of Tannin Enhancement Conditions for Development of High Quality Wild Grape Wine (고품질 산머루 와인 제조를 위한 Tannin 강화 조건 확립)

  • Park, Mi-Hwa;Lee, Jeong-Ok;Kim, Eun-Jung;Kim, Jong-Won;Lee, Hyo-Hyung;Kim, Hui-Hun;Lee, Sang-In;Kim, Young-Hun;Ryu, Chung-Ho
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.37 no.7
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    • pp.921-926
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    • 2008
  • Wild grapes contain lots of organic acids, vitamins and inorganic salts compared to other fruits. Also, it has known to have excellent effects on preventing cancer and heart disease. Wild grapes are supposed to be superior material for fermentation of wine. Tannin contents of wine, which is an important functional factor in flavor of wine, were enhanced to develop quality of Korean wild grape wine. In this study, we investigated tannin extraction conditions and analyzed quality properties of tannin-enhanced wild grape wine. The most suitable tannin extraction condition for enhancing tannin of wild grape wine was extraction of tannin from green tea using spirits at 4oC. For producing high quality wild grape wine, added concentration and time of tannin extract were 6.5 mg/mL before wild grape wine fermentation. Tannin contents of tannin-enhanced wild grape wine was $7.4{\pm}0.05\;mg/mL$. Quality properties of tannin-enhanced wild grape wine fermented under optimized fermentation conditions were analyzed. pH, acidity and alcohol contents were $3.69{\pm}0.01$, $0.95{\pm}0.01%$ and $12.2{\pm}0.03%$, respectively. Total sugar, tannin, polyphenol and resveratrol contents of tannin-enhanced wild grape wine were $60.00{\pm}1.15\;mg/mL$, $79.50{\pm}0.55\;mg/mL$, $7.40{\pm}0.05\;mg/mL$ and $5.00{\pm}0.11\;mg/mL$, respectively showing significantly higher value than that of commercial wine. Production of high quality wild grape wine is expected with the establishment of optimum fermentation condition and tannin-enhancing process of wild grape wine.

Optimization of Fermentation Process and Quality Properties of Wild Grape Wine (산머루 와인의 최적 발효조건 및 품질특성)

  • Kim, Eun-Jung;Kim, Yeong-Hoon;Kim, Jong-Won;Lee, Hyo-Hyung;Ko, Yu-Jin;Park, Mi-Hwa;Lee, Jeong-Ok;Kim, Young-Suk;Ha, Yeong-Lae;Ryu, Chung-Ho
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.36 no.3
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    • pp.366-370
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    • 2007
  • Wild grapes contain various organic acids, vitamins, and inorganic salts compared to other various fruits. Their anthocyanin compounds are also known to have excellent effects in preventing cancers and heart diseases. Wild grapes are supposed to be a superior material for wine fermentation. This study was performed for searching optimum conditions for producing wild grape wines to improve their quality and taste. Four wild strains were isolated from Muscat Bailey A, ‘Kyoho’ grapevine, and wild grapes. For wild grape wine production, an optimum initial sugar concentration was $24^{\circ}Brix$ and an optimum temperature was $24^{\circ}C$. Sensory characteristics of the wild grape wine were evaluated for incense, sour taste, astringency, and sweet taste. Quality properties of the wild grape wine produced under the optimized fermentation conditions were analyzed. Total sugar, polyphenol contents, and acidity of the wild grape wine were 50.00 mg/mL, 25.30 mg/mL, and 0.95%, showing higher value than those of commercial grape wines. Amino acids, tannins, alcohol contents, and pH were 1.80 mg/mL, 1.88 mg/mL, 12%, and 3.59, respectively. The optimum fermentation conditions can be used to improve quality of the wild grape wine.

An Analysis on Aspects of Farm Lands Damaged by the Wild Boar (Sus scrofa) in Gyeongnam Province, Korea (경상남도 농경지에서 멧돼지에 의한 피해 경향 분석)

  • Kim, Seul-Ong;Kwon, Kwan-Ik;Kim, Tae-Su;Ko, Hyun-Seo;Jang, Gab-Sue
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.17 no.6
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    • pp.17-27
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    • 2014
  • Wild boars are one of the major wild life animals of which the number has increased a lot because there has been any predator and/or competitor in the Korean ecosystem. The increase of their number was a cause damaging crops in farm lands during the growing season in South Korea. This study was done to recognize the spatial pattern of farm lands damaged by wild boars. Totally 2,342 farms were known damaged by wild boars in 2012, and used to statistically analyze the perspectives of the farm land damages by wild boars in ArcMap v. 9.3. Damages by wild boars frequently happened in the western part of Gyeongnam Province including Jinju city, Tongyoung city and Namhae county. Most farm lands damaged were located nearby large mountains in this area. It might cause the number of wild boars increased in this area, which could finally stimulate the increase of farm land damaged by the species. Farm land damages by wild boars were also coincident with the preference of wild boars on their food. They preferred crops (e.g., sweet potato and corn) in uplands and rice paddies and orchards. The reason of their preference on rice, upland crops and fruits was related to the efficiency of their getting much more energy in a unit area. Another reason for the species to come into a rice paddy would be that they enjoy mud bath in there for scraping off parasites such as ticks and lice. Wild boars were seemed much overcrowded during the period from July to October when most of crops and fruits get ripen. About three-quarters of total farm land damages happened in this period. This analysis also said that 1,915 fields (81.8% of total targets) appeared within the 100-meter buffer from boundaries of mountain areas. This meant that wild boars were more sensitive to the anthropogenic land uses than we expected. They seemed to conservatively try their feeding activities in farm lands with paying attention to the human activity.

The Robust Phylogeny of Korean Wild Boar (Sus scrofa coreanus) Using Partial D-Loop Sequence of mtDNA

  • Cho, In-Cheol;Han, Sang-Hyun;Fang, Meiying;Lee, Sung-Soo;Ko, Moon-Suck;Lee, Hang;Lim, Hyun-Tae;Yoo, Chae-Kyoung;Lee, Jun-Heon;Jeon, Jin-Tae
    • Molecules and Cells
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    • v.28 no.5
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    • pp.423-430
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    • 2009
  • In order to elucidate the precise phylogenetic relationships of Korean wild boar (Sus scrofa coreanus), a partial mtDNA D-loop region (1,274 bp, NC_000845 nucleotide positions 16576-1236) was sequenced among 56 Korean wild boars. In total, 25 haplotypes were identified and classified into four distinct subgroups (K1 to K4) based on Bayesian phylogenetic analysis using Markov chain Monte Carlo methods. An extended analysis, adding 139 wild boars sampled worldwide, confirmed that Korean wild boars clearly belong to the Asian wild boar cluster. Unexpectedly, the Myanmarese/Thai wild boar population was detected on the same branch as Korean wild boar subgroups K3 and K4. A parsimonious median-joining network analysis including all Asian wild boar haplotypes again revealed four maternal lineages of Korean wild boars, which corresponded to the four Korean wild boar subgroups identified previously. In an additional analysis, we supplemented the Asian wild boar network with 34 Korean and Chinese domestic pig haplotypes. We found only one haplotype, C31, that was shared by Chinese wild, Chinese domestic and Korean domestic pigs. In contrast to our expectation that Korean wild boars contributed to the gene pool of Korean native pigs, these data clearly suggest that Korean native pigs would be introduced from China after domestication from Chinese wild boars.

Analysis of Genetic Diversity and Population Structure of Wild Strains and Cultivars Using Genomic SSR Markers in Lentinula edodes

  • Lee, Hwa-Yong;Moon, Suyun;Ro, Hyeon-Su;Chung, Jong-Wook;Ryu, Hojin
    • Mycobiology
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    • v.48 no.2
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    • pp.115-121
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    • 2020
  • In this study, the genetic diversity and the population structure of 77 wild strains and 23 cultivars of Lentinula edodes from Korea were analyzed using 20 genomic SSRs, and their genetic relationship was investigated. The tested strains of L. edodes were divided into three sub-groups consisting of only wild strains, mainly wild strains and several cultivars, and mainly cultivars and several wild strains by distance-based analysis. Using model-based analysis, L. edodes strains were divided into two subpopulations; the first one consisting of only wild strains and the second one with mainly cultivars and several wild strains. Moreover, AMOVA analysis revealed that the genetic variation in the cultivars was higher than that in the wild strains. The expected and observed heterozygosity and values indicating the polymorphic information content of L. edodes cultivars from Korea were also higher than that of the wild strains. Based on these results, we presume that the cultivars in Korea have developed by using numerous strains from other countries. In conclusion, the usage of wild strains for the development of new cultivars could improve the adaptability of L. edodes to biotic and abiotic stress.

Genetic diversity and relationships of Korean, Japanese, and Chinese Jilin provincial wild soybeans (Glycine soja Sieb. and Zucc.) based on SSR markers (한국, 일본 및 중국 지린성 야생콩(Glycine soja Sieb. and Zucc.)의 SSR마커에 의한 유전적 다양성과 유연관계)

  • Jang, Seong-Jin;Park, Su-Jeong;Piao, Xiang-Min;Song, Hang-Lin;Hwang, Tae-Young;Cho, Yong-Gu;Liu, Xian-Hu;Woo, Sun-Hee;Kang, Jung-Hoon;Kim, Hong-Sig
    • Korean Journal of Breeding Science
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    • v.42 no.1
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    • pp.87-99
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    • 2010
  • Genetic diversity and relationships within and among Korean, Japanese and Chinese Jilin provincial wild soybeans based on SSR markers were evaluated to enlarge genetic variation in soybean breeding in the future. A total of 184 wild soybeans including 67 Korean, 71 Japanese and 46 Chinese Jilin provincial wild soybeans were analyzed to evaluate genetic diversity and relationships based on 23 SSR markers. Korean and Japanese wild soybeans were obtained from National Agrobiodiversity Center, Korea, and Biological Resource Center in Lotus and Glycine, Frontier Science Research Center, University of Miyazaki, Japan, respectively. Chinese wild soybeans were collected from Jilin province, China. Twenty three SSR markers generated a total of 964 alleles with an average of 41.9 alleles per marker. Number of alleles ranged from 23 (Satt635) to 56 (Satt157). Genetic diversity (PIC value) of 184 wild soybeans ranged from 0.880 to 0.968 with an average of 0.945. Number of alleles for Korean, Japanese and Chinese Jilin provincial wild soybeans was 513 with an average of 22.3, 511 with an average of 22.2, and 312 with an average of 13.6 per marker, respectively. PIC value for Korean, Japanese and Chinese Jilin provincial wild soybeans was similar with an average of 0.905, 0.897, and 0.850, respectively. Cluster analysis based on genetic distances estimated by SSR markers classified wild soybeans into 3 clusters. Cluster I included only Chinese Jilin provincial wild soybeans. Cluster II included most of Japanese wild soybeans including 5 Korean wild soybeans. Cluster III included most of Korean wild soybeans including 6 Japanese and 1 Chinese Jilin provincial wild soybeans. Cluster I was not subclassified, but cluster II and III were subclassified into various groups. Genetic distance evaluated by SSR markers between Korean and Japanese wild soybeans was closer than that of between Korean and Chinese Jilin provincial, and between Japanese and Chinese Jilin provincial wild soybeans.

Characterization of Soybean Hybrid Seeds Resulted from Natural Hybridization between LM Soybean and Wild Soybean (LM콩과 야생콩인 돌콩의 교잡후대종 종자의 특성 평가)

  • Park, Hae-Rim;Yook, Min-Jung;Kim, Do-Soon
    • Weed & Turfgrass Science
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    • v.5 no.4
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    • pp.196-202
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    • 2016
  • With increasing LM soybean import, the concern about unintentional gene flow from LM soybean to wild soybean and consequential weedy risk has been growing. Therefore, we conducted this study to characterize seed traits including germination of hybrids resulted from gene flow from LM soybean to wild soybean in comparison with their parents, LM soybean and wild soybean. Pollen-donor LM soybean seeds were much greater and heavier (about 15.0 g of 100 seed weight) than F2 hybrid (5.7 g), while pollen-recipient wild soybean and F1 hybrid seeds were smallest and lightest (about 2.5 g). F2 hybrid was brown, intermediate between yellow LM soybean seed and black wild soybean seed. These findings indicate that F1 hybrid seeds show similar characteristics with wild soybean, while F2 hybrid seeds show intermediate color and size between two parents. F2 hybrid seed showed intermediate traits between two parents in germination and dormancy rates, which were 35% and 65%, respectively. LM soybean showed no dormancy, while wild soybean showed greater than 90% dormancy. This finding indicates that F2 hybrid show intermediate characteristics in seed germination with high dormancy trait, suggesting a potential weediness of hybrids resulted from gene flow from LM soybean to wild soybean.

Physicochemical Analysis and Antioxidative Effects of Wild Grape (Vitis coignetiea) Juice and Its Wine (머루즙과 머루주의 이화학적 분석 및 항산화 효과)

  • Choi, Sun-Young;Cho, Hyun-So;Kim, Haeng-Ja;Ryu, Chung-Ho;Lee, Jeong-Ok;Sung, Nak-Ju
    • The Korean Journal of Food And Nutrition
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    • v.19 no.3
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    • pp.311-317
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    • 2006
  • Physicochemical analysis of the wild grape juice and its wine extracted with ethanol were assessed. The contents of moisture in wild grape juice and its wine were 78.7${\pm}$0.2% and 74.4${\pm}$O.4%, respectively. Total anthocyanin and flavonoid contents of wild grape juice were higher 4 times and 10 times than those of wild grape wine, respectively. Of the 17 amino acids, the glutamic acid in wild gape juice and threonine in wild grape wine were the highest, which were 43.7${\pm}$1.4mg/100 g and 14.1${\pm}$0.7 mg/100 g, respectively. Electron donating abilities of wild grape juice and its wine at concentration of 1,000 ${\mu}$g/ml were 93.1${\pm}$1.2% and 88.9${\pm}$O.8%, respectively. The nitrite scavenging abilities of wild grape juice and its wine were gradually increased by increasing levels of the extracts to 79.6${\pm}$1.27% and 72.8${\pm}$1.01% at concentration of 1,000 ${\mu}$g/ml under pH 2.5.

Manufacture and Quality Characteristics of Wild Grape Wine (머루 발효주의 제조 및 품질 특성)

  • Cho, Chang-Ho;Song, Jung-Hwa;Lee, Eun-Na;Lee, Jong-Soo
    • The Journal of Natural Sciences
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    • v.19 no.1
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    • pp.37-44
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    • 2008
  • To develop a new functional wine, manufacture and quality characteristics of wild grape wine were investigated. Ethanol contents of wild grape wine was 11.0%, and total acidity and volatile acid content were 0.63% and 0.0402%, respectively. Antioxidant activity of the wild grape wine which is related in anti-aging functionality, was 41.6%. From this results, we concluded that the wild grape wine is a high valuable wine.

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