• 제목/요약/키워드: unidentified species

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참복속(genus Takifugu) 어류 3종과 미동정 1종의 형태 및 유전학적 비교 (Morphological and Molecular Comparison among Three Species and One Unidentified Takifugu Species)

  • 백정익;한경호;이성훈;김진구
    • 한국수산과학회지
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    • 제51권4호
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    • pp.404-410
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    • 2018
  • Takifugu rubripes, T. chinensis, T. pseudommus and an unidentified species were morphologically and genetically studied. Morphology was compared using external morphology and the genetic analysis was conducted using mitochondrial DNA cytochrome oxidase I (COI) and cytochrome b (Cyt b). The morphological characteristics of T. rubripes, T. chinensis and T. pseudommus were confirmed, as reported previously. The unidentified species was confirmed to have the characteristics of T. rubripes and T. chinensis. The COI sequences of the four species were 99-100% similar; genetic distance was d=0.0000 and Cyt b genetic distance was d=0.0000-0.00834. Species in the phylogenetic tree belonging to the same group could not be classified genetically. In conclusion, the unidentified species was considered to be a hybrid between T. rubripes and T. chinensis.

유인제에 유인된 미기록 2종을 포함한 나무좀의 종류 (Scolytid Beetles Including Two Unrecorded Species Attracted to the Attractant)

  • 추호렬;우건석;박지두
    • 한국응용곤충학회지
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    • 제27권4호
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    • pp.190-193
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    • 1988
  • 유인제에 유인된 20종의 나무좀과 2종의 미동정 나무좀을 목록화 하였으며, 유인된 나무좀 종 Trypodendron signnatum 과 Xyleborus defensus는 우리나라에서 처음으로 기록되는 종들로 그 특징을 기술하였다.

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Ecological Studies on Togyo Reservoir in Chulwon, Korea VI. The List of Phytoplankton and Periphyton

  • Lee, Kyung;Yoon, Sook-Kyung
    • ALGAE
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    • 제18권4호
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    • pp.263-272
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    • 2003
  • The composition of phytoplankton and periphyton community in Togyo reservoir was investigated. A total of phytoplankton was composed of 150 taxa, belonging to 6 phyla, 8 classes, 15 orders, 5 suborders, 31 families, 71 genera, 106 species, 14 varieties, 1 form and 29 unidentified species. The observed number of diatoms and green algae were much higher than others. Within diatoms the pennate diatoms appeared more than centric diatoms and solitary forms or colonial forms appeared more than filamentous forms in green algae. A total of epipelic algae was composed of 125 taxa, belonging to 3 phyla, 3 classes, 6 orders, 3 suborders, 13 families, 30 genera, 87 species, 29 varieties, 2 forms and 7 unidentified species. The diatoms appeared much more than others. Among those, the pennate diatoms dominated the centric diatoms in species number observed. A total of epilithic algae was composed of 114 taxa, belonging to 4 phyla, 4 classes, 11 orders, 3 suborders, 22 families, 38 genera, 79 species, 8 varieties, 1 form and 26 unidentified species. The observed number of diatoms and green algae were much higher than others. Within diatoms the pennate diatoms dominated the centric diatoms in species number observed. The dominance of pennate diatoms of the diatom community in the epipelic algal community and the epilithic algal community could be assumed that was due to the presence of raphe structure of pennate diatoms.

Characterization of Trichoderma spp. Associated with Green Mold of Oyster Mushroom by PCR-RFLP and Sequence Analysis of ITS Regions of rDNA

  • Park, Myung-Soo;Seo, Geon-Sik;Bae, Kyung-Sook;Yu, Seung-Hun
    • The Plant Pathology Journal
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    • 제21권3호
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    • pp.229-236
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    • 2005
  • Molecular profIles of PCR-RFLP and sequence analysis of internal transcribed spacer (ITS) regions of rDNA were compared between morphologically distinguishable species of Trichoderma isolated from substrates of oyster mushroom in Korea, T. atroviride, T. citrinoviride, T. harzianum, T. longibrachiatum, T. virens, and two unidentified species, Trichoderma sp. 1 and 2. PCR­RFLP analysis divided the Trichoderma spp. into six RFLP groups, A, B, C, D, E, and F. The RFLP groups were generally agreed with described morphological species, except that the RFLP group A containing the two unidentified species. A neighbor-joining tree based on ITS sequences well supported RFLP groups observed by RFLP analysis of ITS regions of rDNA. Additionally, the two unidentified species, Trichoderma sp. 1 and 2, which could not be distinguished by PCR­RFLP analysis, were separated in sequence analysis of ITS regions of rDNA.

동해 연안에 서식하는 성게의 형태변이와 미토콘드리아 유전자 분석 (Morphological Variation and Partial Mitochondrial Sequence Analysis of Echinoid Species from the Coasts of the East Sea)

  • 신지혜;김성규;김영대;손영창
    • 한국양식학회지
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    • 제21권3호
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    • pp.139-145
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    • 2008
  • 성게의 형태학적 분류는 그것의 형질적 변이에 의하여 어려움이 많다. 본 연구에서는 말똥성게, 둥근성게, 보라성게, 분홍성게와 동해안에서 포획된 미확인 성게 4종의 형태형질 비교와 계통유연관계를 조사하였다. 성게의 생식소로부터 genomic DNA를 분리한 후, PCR 방법을 통하여 mitochondrial 12S rDNA 유전자의 염기서열을 분석하였다. 둥근성게과의 말똥성게, 둥근성게, 만두성게과의 보라성게, 주발성게과의 분홍성게의 mitochondrial 12S rDNA의 염기서열은 미확인 성게종들의 그것과 85.9-93.9%의 상동성을 나타내었다. 한편, 미확인 성게종들은 새치성게의 mitochondrial 12S rDNA의 일부 염기서열과 99.8%의 높은 상동성을 보였으며, 각 개체의 mitochondrial 12S rDNA를 통한 분자계통수 분석에 의해서 미확인 성게들은 새치성게의 형태적 변이로 판단된다.

다유전자 분석을 통한 한국산 녹조류 Desmodesmus속의 계통 (Phylogeny of Desmodesmus (Scenedesmaceae, Chlorophyceae) in Korea based on multigene data analysis)

  • 유영채;이남주;전가영;이옥민;양은찬
    • 환경생물
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    • 제41권4호
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    • pp.345-363
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    • 2023
  • 뗏목말과 녹조류는 담수생태계 주요 우점생물군으로, 형태적 가변성과 종 구분 기준의 복잡성이 증가하고 있어 전 세계 40속 약 380종의 계통분류체계는 명확하지 않다(Comas and Komárek 1984; Kim 2015a). 우리나라의 뗏목말과는 17속 119종이 알려져 있으나, Desmodesmus 속 38종의 계통관계에 대한 연구는 전무하다. 본 연구 결과는 우리나라 뗏목말과 Desmodesmus속 종간 계통관계를 다유전자 분석을 기반으로 제시한다. 본 연구는 국립낙동강생물자원관 담수생물자원은행 (FBCC)이 보유하고 있는 Desmodesmus속 19종(unidentifies spp 제외) 70개 배양주의 총 299개 유전자(핵 18S rRNA, 색소체 atpB, petA, rbcL, 및 tufA) 서열을 분석하였다. 본 연구에서 사용한 Desmodesmus속 종의 생태 및 형태적 특징으로 유연관계를 추정하기는 매우 어려웠다. 그러나 색소체 유전자(atpB, petA, rbcL 및 tufA)는 핵 18S rRNA보다 높은 변이율(P-distance)을 보여주며 종간 계통관계 구축의 유용성을 보여주고 있다. 다유전자 유합계통수는 Desmodesmus속 내 6개 이상의 clades 구분을 제안하고 있다. Clade-1에는 D. serratus, unidentified Desmodesmus sp. 1 FBCC-A515, 및 unidentified Desmodesmus sp. 2 FBCC-A1236를 포함하며, Clade-2는 D. communis, D. dispar, D. maximus, D. pannonicus 및 unidentified Desmodesmus sp. 3 (FBCC-A724 와 FBCC-A725)를 포함한다. Clade-3는 D. bicaudatus와 D. intermedius의 2종을, Clade-4는 D. microspina, D. pleiomorphus, D. subspicatus, 및 unidentified Desmodesmus sp. 10 (FBCC-A1279 및 FBCC-A1332)의 4종을, Clade-5는 D. abundans, D. spinosus, unidentified Desmodesmus sp. 4 FBCC-A1293, 및 unidentified Desmodesmus sp. 5 (FBCC-A1277 등)의 4종을, Clade-6는 D. armatus, D. armatus var. longispina, D. opoliensis, unidentified Desmodesmus spp 6~9를 포함한다. 담수생물자원은행(FBCC) 배양주의 새로운 유전자 정보는 뗏목말과 녹조류의 종동정 및 분자생태학적 연구에 활용할 수 있다. 또한 분자계통 결과는 우리나라 Desmodesmus속 녹조류의 종다양성 정보 확대에 기여할 수 있다.

Six Species of Penicillium Associated with Blue Mold of Grape

  • Kim, Won-Ki;Sang, Hyun-Kyu;Woo, Sung-Kyoon;Park, Myung-Soo;Paul, Narayan Chandra;Yu, Seung-Hun
    • Mycobiology
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    • 제35권4호
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    • pp.180-185
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    • 2007
  • Grape fruits with blue mold symptoms were collected from house storages in different locations in Korea and were investigated for their association with Penicillium species. A total of 12 isolates of Penicillium were isolated from the collected fruits. Based on morphological and cultural characteristics and ${\beta}-tublin$ gene sequence data analysis, they were identified as P. bialowiezense, P. citrinum, P. echinulatum, P. expansum, P. solitum and unidentified Penicillium species. P. solitum was the predominant followed by P. expansum. P. bialowiezense and P. echinulatum were newly recorded in Korea. ${\beta}-Tubulin$ gene sequences could be used to distinguish each species of Penicillium and the molecular groups were correlated well with the morphological species. The unidentified species was supposed to be a new species, not previously reported in literature.

Eight unrecorded bacterial species isolated from soil and marine sediment in Korea

  • Kim, Minji;Lee, Ki-Eun;Cha, In-Tae;Lee, Byoung-Hee;Park, Soo-Je
    • Journal of Species Research
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    • 제9권4호
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    • pp.339-345
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    • 2020
  • The Earth contains billions of microbial species, although the vast majority cannot be cultured in laboratories and are thus considered unidentified and uncharacterized. Extremophiles are microorganisms that thrive in extreme conditions, including temperature, salinity, and pH. Extremophilic microorganisms have provided important insights for biological, metabolic, and evolutionary studies. Between 2017 and 2019, as part of a comprehensive investigation to identify bacterial species in Korea, eight bacterial strains were isolated from marine and non-marine environments in Jeju Island. These strains were cultured under extreme salinity or pH conditions. Phylogenetic analysis using 16S ribosomal RNA(rRNA) gene sequencing indicated that all eight strains belonged to the phyla Gammaproteobacteria, Bacilli, and Alphaproteobacteria. Based on their high 16S rRNA gene sequence similarities(>98.7%) and the formation of strong monophyletic clades with their closest related species, all isolated strains were considered as an unrecorded strain, previously unidentified species. Gram stain reaction, culture conditions, colony and cell morphology, biochemical characteristics, isolation source, and National Institute of Biological Resources(NIBR) IDs are described in this article. The characterization of these unrecorded strains provides information on microorganisms living in Korea.

해조류상에 부착한 효모에 관한 연구 (Studies on the Epiphytic Yeast in Seaweeds)

  • 전순배
    • 미생물학회지
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    • 제15권2호
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    • pp.77-84
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    • 1977
  • The yeast population on 14 species of seaweeds and in water estimated by cultural mothods over a 5-month period in south-west in Korea, Nine species of yeasts, comprising unidentified one, and one of yeast-like fungi were identified. Fifty phycase were attributed to the difference of cultural method between the present work and earlier repoeters and, to some exent, the higher number of Rhodotorula glutinis which had a prior adaptation to the release of inhibitory polyphenolic materials. Although, to what extent, all division of algae showed a similar variation in yeast population, correlated with month, the rapid decrease of yeast population in August seems to be the cause of exposure of heat irradiation in this month. The cultural estimate of per se fltration without double filter and one of unidentified species are discussed.

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Inhibitory Effects of Na-Hypochlorite and Heating on the Mycobiota Associated with Fruits or Juice of Passion (Passiflora edulis Sims) in Uganda

  • Ismail Mady A.
    • Mycobiology
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    • 제34권2호
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    • pp.92-98
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    • 2006
  • A total of 34 species belonging to 21 genera of fungi were recorded on passion fruits of both pure and hybrid origin in Uganda, however, the pure type exhibited wider spectrum (28 species and 16 genera) than the hybrid type (21 & 15). Also, yeasts (unidentified and Rhodotorula mucilaginosa) were also encountered in high numbers. Moreover, the mean count of all mycobiota obtained from the pure type was higher than that of hybrid, despite the bigger size of the later. Members of yeasts and Cladosporium followed by Phoma, Penicillium, Fusarium and Alternaria species dominated on passion fruits of pure origin, while only C. cladosporioides, F. solani and yeasts dominated on the hybrid type. Treatment with Na-hypochlorite exhibited inhibitory effects on the total mycobiotic propagules as well as the dominant species from fruits of both types. The current results, therefore, suggest the use of Na-hypochlorite to control the post-harvest mycobiota associated with passion fruits. Regarding the mycobiota contaminating passion juice, yeasts were found to be the major contaminants with Candida parapsilosis being the most common. Moulds constituted only a minor proportion with Acremonium strictum followed by Fusarium chlamydosporum, F. moniliforme, F. acuminatum and F. solani as the most dominant species. In the heat-treated juice samples, the counts of the most commonly encountered mycobiota (both yeasts and molds) were significantly inhibited or completely eliminated. Some unidentified Bacillus species were also recovered from the juice, however, their counts in the heated samples were increased but insignificantly.