• Korean Journal of Fisheries and Aquatic Sciences
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• v.52 no.6
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• pp.656-665
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• 2019

Environmental monitoring was conducted to identify the characteristics and patterns of sedimentary environments of tidal flats in 12 areas on the west coast of Korea. The habitat of the mud shrimp Upogebia major contained higher organic and mud contents compared to the habitat of the manila clam Ruditapes philippinarum. In particular, the mud content increased from 84.38% to 89.18% in the Seongam-4 area, where the mud shrimp and manila clam coexist, and the mean grain size exhibited a finer particle size, from 5.48 Φ to 5.80 Φ. In the mud shrimp habitat, the sediment mud content was > 60% and the mean grain size was > 5 Φ. Additionally, the mud shrimp only inhabited open coast tidal flat areas. The management of shellfish aquaculture farms by physical methods should be continued based on comparison of the sedimentary environments in the Boryeong and Seongam areas in response to the damage to the mud shrimp habitat.

• Fisheries and Aquatic Sciences
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• v.8 no.3
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• pp.161-166
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• 2005

We examined the variation in survival and the respiration and filtration rates of Tresus keenae in response to changes in water temperature and salinity. The survivorship of animals exposed to temperatures below $25^{\circ}C$ for 7 days was $80\%$; however, all test animals died on the fourth day at $28^{\circ}C$. The upper lethal temperature over 7 days was $25.9^{\circ}C$. After exposure to lower temperatures, $93\%$ ofthe animals survived at temperatures over $5^{\circ}C$ for 10 days. Survivorship rapidly decreased below $4^{\circ}C$ with all test animals dying at $2^{\circ}C$ on the eighth day. The $LT_{50}$ over 10 days was $4.8^{\circ}C$. The respiration and filtration rates of T. keenae increased as temperature increased. It is believed that energy consumption increases as a result of the increased respiration rate at temperatures above the upper lethal temperature. At temperatures below the lower lethal temperature, the metabolic rate of T. keenae was substantially lowered. In response to changes in salinity, the survivorship of T. keenae was $90\%$ at 30.2 psu after exposure for 5 days; at below 26.8 psu, all test animals died by the fifth day. The $LS_{50}$ was 29.1 psu. As salinity decreased, both the respiration rate and the filtration rate decreased. At 23.5 psu, the respiration and filtration rates decreased by 48 and $34\%$, respectively. These data have implications for increasing efficiency in the production and management of shellfish aquaculture farms.

• Journal of the Korean Society of Marine Environment & Safety
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• v.19 no.5
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• pp.430-438
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• 2013

In this study, the seasonal field survey was conducted in Goseong Jaran Bay(22 stations), Geoje Hansan Bay(15 stations) and Jinhae Bay(18 stations). We analyzed the sediment environmental parameters(Chemical Oxygen Demand, Ignition Loss, Acid Volatile Sulfides, Total Organic Carbon) and biotic parameters of macrobenthic polychaetes(number of species, density, diversity, evenness). It had a good correlation between total organic carbon and polychaete diversity(R=0.61, P<0.01), and we made a decision them as representative environmental indices. As a result of that, regarding the criteria in the assessment of farm environment, we suggest concentrations of total organic carbon : Peak Point = 15 mg/g dry, Warning Point = 26 mg/g dry, Contaminated Point = 31 mg/g dry and polychaete diversity : ~2.6(Good), 2.6~2.1(Moderate), 2.1~1.2(Poor) and 1.2~(Bad). This could be a scientific basis to establish the environmental standards for fishery management.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.50 no.6
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• pp.777-787
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• 2017

Organic enrichment and pollution was investigated in surface sediments from Jinhae Bay and Geoje-Hansan Bay of Korea, which contain the largest oyster farms in Korean coastal areas. Geochemical indicators (chemical oxygen demand, total organic carbon, ignition loss, and acid volatile sulfide) in sediments, ammonium and nitrate in pore water, and bioluminescence inhibition test for sediment extracts were analyzed. Temporal changes of organic enrichment were also investigated using sediment core samples from Geoje-Hansan Bay. The level of organic pollution in sediments from Jinhae Bay was significantly greater than that of sediments from Geoje-Hansan Bay. Compared with other sites, Jinhae Bay was one of the most polluted coastal areas of Korea. The levels of geochemical indicators in May were comparable to, or higher than, in August. Ammonium concentrations in pore water were two orders of magnitudes greater than the nitrate concentrations, suggesting that the bays are reducing environments. The concentrations of total organic carbon in core sediment samples from shellfish-farming areas increased significantly from 2000 to the present year, and it seems to be associated with increases in anthropogenic activities.

• Journal of fish pathology
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• v.25 no.3
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• pp.165-172
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• 2012

Vibrio alginolyticus (V. alginolyticus), which is one of bacterial pathogens evoking severe infection in fish and shellfish as well as in human has been found at high frequency around all coast areas in Korea. Both V. alginolyticus and V. alginolyticus specific bacteriophage were isolated from sea water and various fishes from fish farms on west coast in Korea. In a morphological study based on electron microscope, the purified phage appeared to be composed of hexagon head of 60 nm and short tail of 20 nm. In the denatured SDS-PAGE analysis, the structural proteins of the phage were found to be 7 different protein fractions ranging from 37.8 to 198 kda. The kind of nucleic acid of the phage was ascertained to a double stranded DNA.

• Fisheries and Aquatic Sciences
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• v.12 no.3
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• pp.209-218
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• 2009

We examined physiological and histological responses related to the survival, oxygen consumption, excretion, and O/N ratio of the ark shell, Scapharca subcrenata, as a result of salinity changes. The 20-day $LS_{50}$ (median lethal salinity) at $15^{\circ}C$ was 13.87 practical salinity units (psu; confidence limits 10.30-18.74 psu), whereas the 14-day $LS_{50}$ at $25^{\circ}C$ was 12.59 psu (confidence limits 8.03-18.16 psu). In conditions of decreasing salinity, the osmolarity of individuals acclimated within 5 h above 26.4 psu but required more than 60 h below 13.2 psu. Oxygen consumption and ammonia excretion rates varied irregularly as salinity decreased. The O/N ratio was 19 and 27 at water temperatures of $15^{\circ}C$ and $25^{\circ}C$, respectively, but decreased to 1-10 as salinity declined. The effects of decreasing salinity were observed in the histological changes to each organ of S. subcrenata. As salinity decreased, cilia fell off, the epithelial layer underwent necrosis and vacuolation, the connective tissue layers of the mantle and visceral mass were destroyed, and hemocytes increased in the gills. The results of this study could prove important in investigating causes of mass mortality and managing shellfish aquaculture farms.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.21 no.4
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• pp.195-205
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• 1988

Distribution of organic materials In the surface sediments was investigated in September 1983 in Chinhae Bay System. Bottom waters containing less than 1ml/l of dissolved oxygen were found in Masan Bay, and in part of Kohyonsong Bay and Wonmunpo Bay. Organic carbon content in the surface sediments of Masan Bay was about 25mg/g and it decreased with increasing distance from the inner Masan Bay. Mean organic carbon contents in Wonmunpo Bay and Kohyonsong Bay were 25.48 and 31.39mg/g, respectively, which are higher values than those in Masan Bay where large amount of domestic and industrial wastewaters art discharged into the surface water and extensive phytoplankton occurs almost year round. Mean organic nitrogen and pheophyton contents were also the highest in Kohyonsong Bay amont eight subareas. In Masan Bay, settling of organic materials on the surface sediments seemed to be not significant because of active tidal mixing and relatively small size of particulate materials. In Kohyonsong Bay and Wonmunpo Bay large fecal pellets produced in shellfish farms could be easily settled down on the sediment because of weak current regime. DO content in the bottom waters were low in the organic material rich areas, and that suggests biodegradation of organic materials in the surface sediments could be an important oxygen consuming process during the study period of September 1983.

• Journal of fish pathology
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• v.24 no.2
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• pp.65-73
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• 2011

In analysis of DNA viruses from the contaminated shellfish using PCR, preparation method of template DNA is an important factor to get enough copy number of viruses. In this study, we evaluated the efficiency of PCR template of Megalocytivirus (sT50mg-D) DNA obtained from 50 mg digestive gland homogenate of oyster using commercial method, and compared with that obtained from 5 g of the same tissues (T5g-D) after PEG precipitation procedures of virus. Both templates DNA suspended in the same volume of distilled water showed positive results by primary PCR with 35 cycles, and the presence of Megalocytivirus was confirmed in oysters collected from cultured farms in Korea. Moreover, PCR with sT50mg-D allowed us to discriminate the contaminated oyster individually, that can not be done in PCR with T5g-D prepared from the mixture of three different individual oyster to get 5 g digestive gland homogenate. In quantitative analysis with real time PCR, Megalocytivirus concentrations in 50 ${\mu}l$ templates prepared using 0.5~50 mg of one positive sample were appeared in the range 6.14E+00~1.2E+02/${\mu}l$. We were not able to get positive result using template DNA contained less than 6.14E+00 copies. Consequently, 2-step PCR performed with DNA extracts from oyster homogenate of small amount (sT50mg-D) i) was enough to detect the contaminated Megalocytivirus in shellfish, ii) allowed us to do the analysis for individual shellfish rather than mixture of several shellfish and iii) showed the presence of Megalocytivirus in oyster from Korea.

• Journal of the Korean Society of Marine Environment & Safety
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• v.28 no.5
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• pp.721-734
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• 2022

This study analyzed the spatio-temporal variation characteristics of major environmental factors such as primary productivity (PP), chlorophyll a, nutrients, sinking particle matters, and organic contamination and biochemical composition of surface sediment on a monthly basis for approximately 2 years around shellfish mariculture in Jaran Bay, Korea. In addition, PP in Jaran Bay was compared with that in other coastal areas and related policy plans were proposed. The average PP of the study area was high in summer and autumn with 6.43~115.43 mgC m^-2 hr^-1 range. This was lower than that in Gamak Bay and Masan Bay, whereas higher than that in Garorim Bay and the West Sea. The PP in coastal waters, where many aquaculture farms were distributed, significantly fluctuated. The different size compositions of phytoplanktons constituting chlorophyll a slightly varied by month, and little restriction existed on the productivity of phytoplanktons owing to the depletion of nutrients. Typically, the Redfield ratio was less than 16, indicating that nitrogen was the limiting factor for the growth of phytoplanktons. The biochemical composition of particulate organic matters in the water column showed the highest carbohydrates, but lipids and protein contents were high in surface sediments. The concentration of TOC and AVS of the surface sediments was high at inside of bay, and sometimes, exceeded the environmental criteria of fishing grounds. The organic C:N ratio of sediments ranged from 8.1 to 10.4 on average. PP had the highest correlation with chlorophyll a, nitrogen and protein of particle organic materials. Recently, chlorophyll a, DIN, and DIP of water column trends tended to decrease, however, the contamination of sediments increased. Considering the annual PP of 125.9 gC m^-2 yr^-1 and mariculture area (oyster) of 4.97 km², the annual carbon production from phytoplanktons was estimated to be about 625 tons, and the annual total wet weight of shellfish (oyster) was estimated to be about 6,250 tons.

• Journal of Ocean Engineering and Technology
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• v.23 no.2
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• pp.18-27
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• 2009

This study was conducted to examine the effect of wind on the circulation of seawater in Gamak Bay, which contains numerous farms for fish and shellfish but suffers a significant loss by fisheries nearly annually from harmful algal blooms. In numerical experiments with a simplified bathymetry for Gamak Bay, the wind in summer appeared to more strongly influence the east-westward flow than the south-northward flow. In winter, this trend was nearly similar to the summer but seemed to have a greater effect on the flow at the north-west of the bay than the flow at the south mouth of the bay. On the other hand, in numerical experiments with a realistic bathymetry for Gamak Bay, the wind in summer appeared to more strongly influence the east-westward flow than the south-northward flow. Furthermore, the effect of the wind was stronger at the south mouth of the bay than at the north-west of the bay. In contrast, the wind in winter affected the east-westward flow more strongly and its effect appeared stronger at the north-west of the bay than at the south mouth of the bay. In addition, the effect of the wind tended to increase with distance from the east to the west. Therefore, the tidal currents in Gamak Bay proved to be strongly influenced by the wind, in particular east-westward. However, some measures are urgently required to improve the water quality of the bay, since the south-northward flow turned out to be obstructed by an east-westward shoal located in the middle of the bay.