• Title/Summary/Keyword: repeat element

Search Result 64, Processing Time 0.033 seconds

A New Efficient Acpuisition Method and Its Implementation using the Phase Offset of Binary Code (이원부호 위상 오프셋를 이용한 새로운 방식의 동기 획득 시스템 구현)

  • 김동희;한영열
    • Proceedings of the IEEK Conference
    • /
    • 1998.06a
    • /
    • pp.11-14
    • /
    • 1998
  • This paper introuces a new efficient method of synchronization acquisition which is the most important element in DS-CDMA system using the phase offset of binary code. This approach uses the binary code function which can easily estimate the phase offset from the received spreading waveforms which respect to the receiver-stored replica of the spreading code. This paper proposes the initial acquisition model with repeat error control device that is good for perfomance. The hardware is implemented by TMS320c30

  • PDF

The Study on the Luminescent Element of Electro Chromisn in Polyelectrolyte (고분자전해질 Electro Chromism의 발광소자에 관한 연구)

  • 국상훈;고두석
    • The Proceedings of the Korean Institute of Illuminating and Electrical Installation Engineers
    • /
    • v.2 no.1
    • /
    • pp.65-74
    • /
    • 1988
  • For experiment, we made the electro chemical display element with the NESA glass of display electrode which had low resistance. Density of injection charge, optical density and response characteristics were observed through coloring and achromatizing phemomena in the display element As optical electric chemical reaction was occured in $WO_3$ and cell, it was possible to repeat colouring and achromatizing, and the colouring characteristics was good. And the higher colouring and achromatizing voltage, the lower resistance of electrode and the thinner $WO_3$film was, the better response characteristics. With analyzing phenomena of electro chromism, we could find the possibility of practical use of the coloring and achromatizing element for clock, instrument and guide plate.

  • PDF

A Study on the Optimum Design using Finite Element Analysis and Automatic Design of Lachet Wheel (라체트 휠의 자동설계와 유한요소해석을 이용한 최적화에 관한 연구)

  • 박진형;이승수;김민주;김태호;전언찬
    • Proceedings of the Korean Society of Machine Tool Engineers Conference
    • /
    • 2001.04a
    • /
    • pp.3-8
    • /
    • 2001
  • This study is an investigation for the ADS optimum design by using FEA. We write out program which express ADS perfectly and reduce the required time for correcting of model to the minimum in solution and manufacture result. We complete algorithm which can plan optimum forming of model by feedback error information in CAE. Then we correct model by feedback date obtaining in solution process, repeat course following stress solution again and do modeling rachet wheel for optimum forming. That is our aim. In rachet wheel, greatest equivalence stress originates in key groove corner and KS standard is proved the design for security.

  • PDF

A Study on the Verification Using Finite Element Analysis and Automatic Design of Ratchet Wheel (래칫 휠의 자동설계와 유한요소해석을 이용한 검증에 관한 연구)

  • 김민주;이승수;전언찬
    • Transactions of the Korean Society of Machine Tool Engineers
    • /
    • v.11 no.3
    • /
    • pp.45-50
    • /
    • 2002
  • This study is an investigation far the Am optimum design using FEA. We write out program which express ADS perfectly and reduce the required time far correcting of model to the minion in solution md manufacture result. We complete algorithm which can plan optimum forming of model by feedback error information in CAE. Then we contract model by feedbback date obtaining in solution process, repeat course following stress solution again iud do modeling rachet wheel for optimum forming. That is our aim. In cachet wheel, greatest equivalence strss originates in key groove comer and KS standard is proved the design far security.

Evolutionary course of CsRn1 long-terminal-repeat retrotransposon and its heterogeneous integrations into the genome of the liver fluke, Clonorchis sinensis

  • Bae, Young-An;Kong, Yoon
    • Parasites, Hosts and Diseases
    • /
    • v.41 no.4
    • /
    • pp.209-219
    • /
    • 2003
  • The evolutionary course of the CsRn1 long-terminal-repeat (LTR) retrotransposon was predicted by conducting a phylogenetic analysis with its paralog LTR sequences. Based on the clustering patterns in the phylogenetic tree, multiple CsRn1 copies could be grouped into four subsets, which were shown to have different integration times. Their differential sequence divergences and heterogeneous integration patterns strongly suggested that these subsets appeared sequentially in the genome of C. sinensis. Members of recently expanding subset showed the lowest level of divergence in their L TR and reverse transcriptase gene sequences. They were also shown to be highly polymorphic among individual genomes of the trematode. The CsRn1 element exhibited a preference for repetitive, agenic chromosomal regions in terms of selecting integration targets. Our results suggested that CsRn1 might induce a considerable degree of intergenomic variation and, thereby, have influenced the evolution of the C. sinensis genome.

Identification and Phylogenetic Analysis of Long Terminal Repeat Elements of the Human Endogenous Retrovirus K Family (HERV-K) from a Human Brain cDNA Library

  • Kim, Heui-Soo;Lee, Young-Choon
    • Animal cells and systems
    • /
    • v.5 no.2
    • /
    • pp.133-137
    • /
    • 2001
  • Long terminal repeats (LTRs) of the human endogenous retrovirus K family (HERV-K) have been found to be coexpressed with sequences of genes closely located nearby. We examined transcribed HERV-K LTR elements in human brain tissue. Using cDNA synthesized from mRNA of the human brain, we performed PCR amplification and identified ten HERV-K LTR elements. These LTR elements showed a high degree of sequence similarity (92.4-99.7%) with the human-specific LTR elements. A phylogenetic tree obtained by the neighbor-joining method revealed that HERV-K LTR elements could be divided into two groups through evolutionary divergence. Some HERV-K LTR elements (HKL-B7, HKL-B8, HKL-B10) belonging to the group II from human brain cDNA were closely related to the human-specific HERV-K LTR elements. Our data suggest that HERV-K LTR element are active in the human brain; they could conceivably play a pathogenic role in human diseases such as psychosis.

  • PDF

Identification of hRad21-Binding Sites in Human Chromosome

  • Chin Chur;Chung Byung-Seon
    • Genomics & Informatics
    • /
    • v.4 no.1
    • /
    • pp.11-15
    • /
    • 2006
  • The aim of this study is to identify hRad21-binding sites in human chromosome, the core component of cohesin complex that held sister chromatids together. After chromatin immunoprecipitation with an hRad21 antibody, it was cloned the recovered DNA and sequenced 30 independent clones. Among them, 20 clones (67%) contained repetitive elements including short interspersed transposable elements (SINE or Alu elements), long terminal repeat (LTR) and long interspersed transposable elements (LINE), fourteen of these twenty (70%) repeats clones had Alu elements, which could be categorized as the old and the young Alu Subfamily, eleven of the fourteen (73%) Alu elements belonged to the old Alu Subfamily, and only three Alu elements were categorized as young Alu subfamily. There is no CpG island within these selected clones. Association of hRad21 with Alu was confirmed by chromatin immunoprecipitation-PCR using conserved Alu primers. The primers were designed in the flanking region of Alu, and the specific Alu element was shown in the selected clone. From these experiments, it was demonstrated that hRad21 could bind to SINE, LTRs, and LINE as well as Alu.

Transposable Elements and Genome Size Variations in Plants

  • Lee, Sung-Il;Kim, Nam-Soo
    • Genomics & Informatics
    • /
    • v.12 no.3
    • /
    • pp.87-97
    • /
    • 2014
  • Although the number of protein-coding genes is not highly variable between plant taxa, the DNA content in their genomes is highly variable, by as much as 2,056-fold from a 1C amount of 0.0648 pg to 132.5 pg. The mean 1C-value in plants is 2.4 pg, and genome size expansion/contraction is lineage-specific in plant taxonomy. Transposable element fractions in plant genomes are also variable, as low as ~3% in small genomes and as high as ~85% in large genomes, indicating that genome size is a linear function of transposable element content. Of the 2 classes of transposable elements, the dynamics of class 1 long terminal repeat (LTR) retrotransposons is a major contributor to the 1C value differences among plants. The activity of LTR retrotransposons is under the control of epigenetic suppressing mechanisms. Also, genome-purging mechanisms have been adopted to counter-balance the genome size amplification. With a wealth of information on whole-genome sequences in plant genomes, it was revealed that several genome-purging mechanisms have been employed, depending on plant taxa. Two genera, Lilium and Fritillaria, are known to have large genomes in angiosperms. There were twice times of concerted genome size evolutions in the family Liliaceae during the divergence of the current genera in Liliaceae. In addition to the LTR retrotransposons, non-LTR retrotransposons and satellite DNAs contributed to the huge genomes in the two genera by possible failure of genome counter-balancing mechanisms.

A Retinoid Antagonist Inhibits the Retinoic Acid Response Element that Located in the Promoter Region of the Cytomegalovirus

  • Lee, Mi-Ock;Ahn, Ju-Mi;Han, Sun-Young
    • Biomolecules & Therapeutics
    • /
    • v.6 no.3
    • /
    • pp.276-282
    • /
    • 1998
  • Retinoids regulate a wide variety of biological processes such as cellular proliferation and differentiation in many cell types. They have also shown to stimulate replication of several viruses including human cytomegalovirus (CMV). Retinoid signalling pathway involves two distinct subfamilies of nuclear receptors, retinoic acid receptors (RARs) and retinoid X receptors (RXRs) that bind to specific retinoic acid response elements (RAREs) in the promoter regions of retinoid-target genes. Here, we characterized RAREs in the regulatory regions of the CMV and of the hepatitis B vi.us (HBV). The viral RAREs, i.e., CMV-RARE and HBV-RARE, are composed of two consensus RARE half-sites (A/GGGTCA) arranged as a direct repeat separated by 5-bp and 1-bp, respectively. The RAREs were activated by both RAR/RXR heterodimers and RXR homodimers in transient transfection experiments. We also found that COUP-TF$\alpha$ (chicken ovalbumin upstream promoter-transcription factor u) and COUP-TF$\beta$ repressed the retinoid response of the viral elements. Further we demonstrated that previously known retinoid antagonist, SRI 1330, repressed retinoid-induced transactivation of the CMV-RARE. These results implicate Vitamin A, it's nuclear receptors and COUP-TFs as important regulators of the CMV and HBV pathogenesis and the SRl1330 as potential negative modulator of such retinoid-dependent processes.

  • PDF

Krylov subspace-based model order reduction for Campbell diagram analysis of large-scale rotordynamic systems

  • Han, Jeong Sam
    • Structural Engineering and Mechanics
    • /
    • v.50 no.1
    • /
    • pp.19-36
    • /
    • 2014
  • This paper focuses on a model order reduction (MOR) for large-scale rotordynamic systems by using finite element discretization. Typical rotor-bearing systems consist of a rotor, built-on parts, and a support system. These systems require careful consideration in their dynamic analysis modeling because they include unsymmetrical stiffness, localized nonproportional damping, and frequency-dependent gyroscopic effects. Because of this complex geometry, the finite element model under consideration may have a very large number of degrees of freedom. Thus, the repeated dynamic analyses used to investigate the critical speeds, stability, and unbalanced response are computationally very expensive to complete within a practical design cycle. In this study, we demonstrate that a Krylov subspace-based MOR via moment matching significantly speeds up the rotordynamic analyses needed to check the whirling frequencies and critical speeds of large rotor systems. This approach is very efficient, because it is possible to repeat the dynamic simulation with the help of a reduced system by changing the operating rotational speed, which can be preserved as a parameter in the process of model reduction. Two examples of rotordynamic systems show that the suggested MOR provides a significant reduction in computational cost for a Campbell diagram analysis, while maintaining accuracy comparable to that of the original systems.