• Proceedings of the Korean Society for Bioinformatics Conference
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• 2005.09a
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• pp.325-330
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• 2005

We are generally interested in the analysis, detection and prediction of structural motifs in proteins, in order to infer compatibility of amino acid sequence to structure in proteins of known three-dimensional structure available in the Protein Data Bank. In this context, we are analyzing some of the well-characterized structural motifs in proteins. We have analyzed simple structural motifs, such as, ${\beta}$-turns and ${\gamma}$-turns by evaluating the statistically significant type-dependent amino acid positional preferences in enlarged representative protein datasets and revised the amino acid preferences. In doing so, we identified a number of ‘unexpected’ isolated ${\beta}$-turns with a proline amino acid residue at the (i+2) position. We extended our study to the identification of multiple turns, continuous turns and to peptides that correspond to the combinations of individual ${\beta}$ and ${\gamma}$-turns in proteins and examined the hydrogen-bond interactions likely to stabilize these peptides. This led us to develop a database of structural motifs in proteins (DSMP) that would primarily allow us to make queries based on the various fields in the database for some well-characterized structural motifs, such as, helices, ${\beta}$-strands, turns, ${\beta}$-hairpins, ${\beta}$-${\alpha}$-${\beta}$, ${\psi}$-loops, ${\beta}$-sheets, disulphide bridges. We have recently implemented this information for all entries in the current PDB in a relational database called ODSMP using Oracle9i that is easy to update and maintain and added few additional structural motifs. We have also developed another relational database corresponding to amino acid sequences and their associated secondary structure for representative proteins in the PDB called PSSARD. This database allows flexible queries to be made on the compatibility of amino acid sequences in the PDB to ‘user-defined’ super-secondary structure conformation and vice-versa. Currently, we have extended this database to include nearly 23,000 protein crystal structures available in the PDB. Further, we have analyzed the ‘structural plasticity’ associated with the ${\beta}$-propeller structural motif We have developed a method to automatically detect ${\beta}$-propellers from the PDB codes. We evaluated the accuracy and consistency of predicting ${\beta}$ and ${\gamma}$-turns in proteins using the residue-coupled model. I will discuss results of our work and describe databases and software applications that have been developed.

• Journal of Advanced Marine Engineering and Technology
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• v.39 no.7
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• pp.709-715
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• 2015

Underwater gliders do not typically have separate propellers for forward motion. They generate propulsive forces based on the difference between their buoyancy and gravity. They can control the volume from the buoyancy engine to adjust the propulsive force. In addition, the attitude of the underwater glider is controlled by a rubberless motion controller. The motion controller can change the mass center and moment of inertia of the inner moving mass. Owing to the change in these parameters, the attitude of the underwater glider is changed. In this study, we derive nonlinear, six degree of freedom (DOF) mathematical models for the motion controller and buoyancy engine. Using these equations, we perform dynamic simulations of the proposed underwater glider, and verify the suitability of the design and dynamic performances of the proposed underwater glider. We then perform the motion control simulation for the pitch and roll angle, and analyze the dynamic performance according to the pitch and roll angles.

• Journal of the Society of Naval Architects of Korea
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• v.28 no.2
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• pp.40-51
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• 1991

A Propeller design method using the newly developed blade section(KH18), which behaves better cavitation characteristics, is presented. Experimental results for two-dimensional foil sections show that the lift-drag curve and the cavitation-free bucket diagram of the new blade section are wider comparing to those of the existion NACA sections. This characteristic of the new section is particularly important for marine propeller applications since angle of attack variation of the propeller blade operating behind a non-uniform ship's wake is relatively large. A lifting surface theory is used for the design of a propeller with the developed section for a 2700 TEU container ship. Since the most suitable chordwise loading shape is not known a priori, chordwise loading shape is chosen as a design parameter. Five propellers with different chordwise loading shapes and different foil sections are designed and tested in the towing tank and cavitation tunnel at KRISO. It is observed by a series of extensive model tsets that the propeller(KP197) having the chordwise loading shape, which has less leading edge loading at the inner radii and more leading edge loading at the outer radii of 0.7 radius, has higher propulsive efficiency and better cavitation characteristics. The KP197 propeller shows 1% higher efficiency, 30% cavitation volume reduction and 9% reduction of fluctuating pressure level comparing to the propeller with an NACA section. More appreciable efficiency gain for the new blade section propeller would be expected by reduction of expanded blade area considering the better cavitation characteristics of the new blade section.

• Journal of the Society of Naval Architects of Korea
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• v.34 no.1
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• pp.11-23
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• 1997

This paper contains a new approach to blade section design method for marine propellers. The hydrodynamic characteristics of 2-D section are highly influenced by its geometrical parameters i.e., thickness and camber distributions and leading edge radius etc. To consider fully turbulent flow field near 2-D section. the finite volume method with k-${\varepsilon}$ turbulent model which solve Reynolds time averaged Navier-Stokes(RANS) equation is applied. In this study, O-type grid system that can provide many calculation points on blade surface is used. The results were compared with those of the experiment of NACA0012 to confirm the accuracy of the developed codes. The goal of this study is the development of a blade section with high efficiency and low drag. To achieve this, we carried out the tests of lift, drag and cavitation characteristics in cavitation tunnel. The results of experiment were compared with numerical results in order to validate the proposed blades design method. By comparing the numerical results with the experiments, we found that the new blade section, KH28 allows superior performance in efficiency and cavitation avoidance characteristics. We further investigated the blade section design method and an application study of this section, KH28 to apply to the marine propeller. In order to improve the accuracy of numerical results on prediction of lift and drag, we conclude here that the 2-layer boundary model must be used.

• Journal of the Korean Society of Marine Environment & Safety
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• v.27 no.6
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• pp.867-874
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• 2021

The IoT (Internet of Things) technology is rapidly becoming an important consideration in many engineering fields in the current 4th industrial era. In recent years, the concepts of digital shipbuilding and smart factories have been adopted as trends in shipyards. However, there is active interest in research on implementing autonomous driving in autonomous vehicles and airplanes, which is currently available in commercial form in a limited capacity. The present study is regarding the path-tracking performance of a boat to accomplish an autonomous driving mission using a flight controller (FC) and real-time kinematic (RTK) global positioning system (GPS) based on an open-source Ardupilot; an actual sea test is also performed using this system on a calm lake. The boat's mission is to evaluate the maneuverability of the self-driving process to a specific point and returning to the home position. For a given speed, the difference between the preset mission trajectory and actual operational trajectory was analyzed, and a series of studies were conducted on the applicability of the system to ships. In addition, the movements and maneuverability of the OmniX-type hull with four propellers were investigated, and the driving path-tracking performance was observed to increase by a maximum of 48%.

• Journal of the Korean Society of Marine Environment & Safety
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• v.27 no.5
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• pp.557-565
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• 2021

Path-following control is considered as one of the most fundamental skills to realize autonomous navigation of marine vessels in the ocean. This study addresses with the path-following control for a ship in which there are environmental disturbances in the directions of the surge, sway, and yaw motions. The guiding principle and back-stepping method was utilized to solve the ship's tracking problem on the reference path generated by a virtual ship. For path-following control, error dynamics is one of the most important skills, and it extends to the research fields of automatic collision avoidance and automatic berthing control. The algorithms for the guiding principles and error variables have been verified by numerical simulation. As a result, most error variables converged to zero values with the controller except for the yaw angle error. One of the most interesting results is that the tracking errors of path-following control between two ships are smaller than the existing safe passing distances considering interaction forces from near passing ships. Moreover, a trade-off between tracking performance and the ship's safety should be considered for determining the proper control parameters to prevent the destructive failure of actuators such as propellers, fins, and rudders during the path-following of marine vessels.

• Journal of the Korea Academia-Industrial cooperation Society
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• v.20 no.9
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• pp.150-155
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• 2019

Cavitation refers to a phenomenon in which empty spaces occur in a fluid due to changes in pressure and a velocity. When a liquid moves at a high speed, the pressure drops below the vapor pressure, and vapor bubbles are generated in the liquid. This study used CFD to analyze the flow of fluid machinery used in marine and offshore plants. The goals are to ensure the validity of the analysis method for marine propellers in an open water test, to increase the forward ratio, and to use FLUENT to understand the flow pattern due to cavitation. A three-dimensional analysis was performed and compared with experimental data from MOERI. The efficiency was highest at advance ratios of 0.7 - 0.8. Thrust was generated due to the difference between the pressure surface and the suction surface, and it was estimated that bubbles would be generated in the vicinity of the back side surface rather than the face side of the propeller, resulting in more cavitation. The cavitation decreased sharply as the advance ratio increased. The thrust and torque coefficients were comparable to those of the MOERI experimental data except at the advance ratio of 1, which showed a difference of less than 5%. Therefore, it was confirmed that CFD can evaluate an open water propeller test.

• The Journal of the Acoustical Society of Korea
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• v.42 no.3
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• pp.243-249
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• 2023

The occurrence of cavitation on the propeller is directly linked to the naval ship's survivability, and it is necessary to design a propeller shape that delays the cavitation inception. However, the propeller cavitation can occur under various operating conditions, thus it is important to identify whether the propeller cavitation exists during operation as well as in the design phase. To this end, it is necessary to use noise or vibration signals on board to monitor the cavitation inception. In this study, a hydrophone and an accelerometer were installed on the ship hull right above the propeller to compare the performance of analyzing cavitation inception between acoustic and vibration signals. Also, a high speed camera was used to visually observe the occurrence of cavitation through an observation window. The measured results showed that the spectral shapes between acoustic and vibration signals were different, but the level increases at each frequency band and the overall level of the frequency band from 1 kHz to 10 kHz showed a similar tendency. The Detection of Envelope Modulation On Noise (DEMON) analysis also showed similar results for both acoustic and vibration signals, confirming that both hydrophones and accelerometers can be utilized in the analysis of cavitation inception.