• Title/Summary/Keyword: morphological relationship

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Morphological Characteristics of the Blue Trevally, Carangoides ferdau (Perciformes: Carangidae) and its Phylogenetic Relationships among Korean Relatives (흑전갱이, Carangoides ferdau의 형태적 특징 및 분자계통분류학적 위치)

  • Kim, Joon Sang;Song, Choon Bok
    • Korean Journal of Ichthyology
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    • v.25 no.4
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    • pp.222-226
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    • 2013
  • As Carangoides ferdau was previously reported based on its underwater photograph, morphological descriptions have been incomplete up to the presence in Korea. On the base of two samples collected at the coast of Jeju island, morphological characters of C. ferdau are described in detail. This species is characterized by having the forepart of second dorsal fin much prolonged, 7~8 transverse dark bands on body, and snout length almost equal to eye diameter. It is morphologically very similar to C. orthogroammus, but is easily distinguished in having transverse dark bands instead of yellow spot on the body of C. orthogroammus. Phylogenetic relationships based on the mitochondrial cytochrome b (1,141 base pairs) sequences shows that C. ferdau is closely related to C. orthogroammus, and C. dinema also has a sister group relationship with C. ablongus. Both genetic distances (p-distances) are 8.2%, respectively.

Analysis of Morphological and Genetic Relationships amomg Isolates of the Artificially Cultivated Mushroom, Hypsizygusmarmoreus (느티만가닥버섯 균주의 형태 및 유전적 유연관계 분석)

  • Kim, Min-Kyung
    • The Korean Journal of Mycology
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    • v.48 no.3
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    • pp.313-323
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    • 2020
  • To investigate the morphological characteristics and genetic relationships among isolate of the artificially cultivated mushroom Hypsizygus marmoreus, 111 isolates were collected from Korea and other countries. Random amplified polymorphic DNA polymerase chain reaction (RAPD-PCR) and ITS rDNA sequencing were used to confirm the genetic relationships among the collected H. marmoreus isolates. As a result of RAPD analysis using universal rice primer (URP)-PCR, all isolates of H. marmoreus clustered into three groups, which showed high sequence similarity (>90%). In addition, isolates with morphological and geographical differences formed independent clusters. However, it was impossible to distinguish between brown and white strains. Sixteen strains showing morphological and geographic differences were selected, and their ITS region sequences (640 bp) were aligned and compared. The ITS region sequences belonging to these isolates showed 94.8-99.1% similarities to those of publicly available H. marmoreus strains in GenBank. In conclusion, there were differences among isolates in terms of morphology and the area from which they were collected, but all the isolates used in the experiment were classified as H. marmoreus.

Studies on the Morphological Characteristics of Wild Yellow Chrysanthemun in Korea (황색자생균의 형태적 특성에 관한 연구)

  • 이종수
    • Journal of the Korean Institute of Landscape Architecture
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    • v.23 no.1
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    • pp.111-122
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    • 1995
  • 12 populatiDns of Ch indicum L. and it's variation antogenous in Tforea were selected throughout the country and their morphological characteristics were studied in this paper. The results are as follows. 1) The mean of the plant height is 97.3cm. Ch. indicunl is 76.5cm and Ch. boreale is 116. 6cm in height. The number of nodes is 58 on the average. The color of the stem is generally black-red in the case of Ch. indicum and is green for Ch. boreale. 2) The leaves of Ch. inficum are smaller In size and thicker than chose of Ch. boreale, and it has a stipule. This fact enables us to distinguish one species from the other, however, the Gyukpo-population of Ch. indicum has a large leaf, and Byunsan-population of Ch. boreale has a stipule so that the above fact is not an exact criterion on which to base one classification. 3) The size of the capitulum is 24.9mm for Ch. indicum and 15.6mm in the case of Ch. boreaje so that the difference between species is admitted. It was confirmed hat the size of the capitulum has positive correlation to that of the pedicel and has egative correlation to the number of flowers, so that of inflorescence, Ch. indicumhas corymb, and Ch. boreale has crowed corymb or umbel-type.The number of ligulates is 19 on the average, which no the difference being founnd between species and populations.4) The cluster analysis of morphological characteristics showed that Ch. indicum wasdivided into two groups, which was shown thought to be due to the difference of speciesbetween Ch. indicum and Ch. boreale. However, it could not be shown that their morphological characteristics explain a geographical relationship between populations

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The Effective Wind Velocity and the Patterns of Morphological Change in the Coastal Dune Area (해안사구에서의 유효풍속과 지형변화)

  • Sea, Jong-Cheol
    • Journal of the Korean association of regional geographers
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    • v.10 no.3
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    • pp.667-681
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    • 2004
  • This research is aimed to investigate the relationship of the effective wind velocity and the morphological change in coastal dune at Sindu-ri in Korea. Sediment flux was estimated by the measurement of elevation change along eight transects deployed in the study area from July 1999 to July 2000. The results of this study indicated that. first. based on the occurrence of morphological change and winds effective for sand movement. two distinct seasons were identified: a season of deposition and that of erosion. During the depositional season, spanning from November to April, effective winds were dominant and sand accumulation occurred mainly in foredunes and sequentially in dune plains. During the erosional season, from May through October, volume change was small and erosion or sand loss occurred mostly at the dunefoot of foredunes. Secondly, the research revealed that the sediment budget of Sindu coastal dune turned out to be surplus on the whole, but there are some regional differences. Deficit budgets were observed partly in secondary dunes. The utmost northern part of Sindu coastal dune was provided with abundant sand, whereas the central and northern parts were poorly supplied.

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Correlations between abnormalities of morphological details and DNA fragmentation in human sperm

  • Nguyen, Hiep Tuyet Thi;Dang, Hong Nhan Thi;Nguyen, Thai Thanh Thi;Nguyen, Trung Van;Dang, Thuan Cong;Nguyen, Quoc Huy Vu;Le, Minh Tam
    • Clinical and Experimental Reproductive Medicine
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    • v.49 no.1
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    • pp.40-48
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    • 2022
  • Objective: As the associations of sperm DNA fragmentation with morphology have not been examined in detail, this study aimed to investigate the relationship between abnormalities of morphological details and DNA integrity in human sperm. Methods: In this cross-sectional study, men from infertile couples were enrolled at Hue Center for Reproductive Endocrinology and Infertility, Vietnam. Conventional semen parameters, including morphological details, were analyzed following the World Health Organization 2010 criteria. Sperm DNA fragmentation was evaluated using a sperm chromatin dispersion assay. The relationships and correlations between semen parameters, sperm morphology, and the type of halosperm and the DNA fragmentation index (DFI) were analyzed. Results: Among 130 men in infertile couples, statistically significant differences were not found in the sperm halo type between the normal and abnormal sperm morphology groups. The percentage of round-head spermatozoa was higher in the DFI >15% group (16.98%±12.50%) than in the DFI ≤15% group (13.13% ±8.82%), higher values for amorphous heads were found in the DFI >15% group, and lower values for tapered heads were observed in the DFI ≤15% group; however, these differences were not statistically significant. Small-halo sperm and the DFI were positively correlated with round-head sperm (r=0.243, p=0.005 and r=0.197, p=0.025, respectively). Conclusion: The rate of general sperm morphological abnormalities in semen analysis was not related to sperm DNA integrity. However, round sperm heads were closely associated with sperm DNA fragmentation.

Phylogeny of Scopolia Jacq. s. str. based on ITS sequences (ITS 염기서열에 의한 미치광이풀속의 계통)

  • Kim, Young-Dong;Paik, Jin-Hyub;Kim, Sung-Hee;Hong, Suk-Pyo
    • Korean Journal of Plant Taxonomy
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    • v.33 no.4
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    • pp.373-386
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    • 2003
  • Internal transcribed spacer (ITS) sequences of nuclear ribosomal DNA were determined for 14 individuals representing eight taxa from Scopolia s. str. and related genera, Anisodus and Atropanthe. We found that the ITS sequences of Korean endemic species, S. parviflora, are significantly different from its allied species, S. japonica. This is contradictory to traditional taxonomic treatments in which those species are regarded as conspecific. S. parviflora exhibited closer relationship to S. carniolica, which is disjunctly distributed in Europe. In spite of substantially high sequence divergence between S. japonica and S. parvlflora/S. carniolica clade, morphological resemblance is evident among the species. Morphological stasis concept (retardation of morphological differentiation or evolution of similar characters among the disjuncts in a similar ecological habitat) was referred to understand this rather unusual evolutionary feature. S. lutescens, another Korean endemic species, shared almost identical ITS sequences with S. parviflora. Lack of diagnostic character distinguishing the taxa suggests that they are conspecific. Anisodus carniolicoides, which was originally described in Scopolia, was grouped with A. luridus and A. tanguticus. The monophyletic Anisodus formed a sister group relationship with a monotypic genus Atropanthe.

A Taxonomic Study of Asarum (Aristolochiaceae) in Korea (한국산 족도리풀속(Asarum, 쥐방울덩굴과)의 분류학전 연구)

  • So, Soonku;Kim, Muyeol
    • Korean Journal of Plant Taxonomy
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    • v.38 no.2
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    • pp.121-149
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    • 2008
  • Taxonomic treatment and the identification key for 6 species and 4 varieties from the genus Asarum (Aristolochiaceae) in Korea were presented on the basis of the morphological analyses. Recently the taxonomy of the genus Asarum in Korea is controversial in the definition of species and the establishment of variation range. Our morphological studies supported that the species A. patens, A. misandrum and A. versicolor should be recognized as independent species by the unique morphological characters such as calyx lobes, stylar protuberance and leaf variegation. Second, A. sieboldii var. cornutum, A. koreanum, A. maculatum and A. sonunsanense, regarded as species or variety by different scholars, showed a close relationship with A. sieboldii by the similar calyx characters. Thus, new combinations, such as A. sieboldii for. cornutum, A. sieboldii for. koreanum, A. sieboldii for. maculatum and A. sieboldii for. sonunsanense, are proposed. And A. heterotropoides var. seoulense and A. heterotropoides var. mandshuricum also had a close relationship, thus, new combinations, A. mandshuricum for. seoulense, A. mandshuricum for. mandshuricum, are proposed. Furthermore, it is appropriate that A. heterotropoides var. heterotropoides, only distributed in Japan, is revised into A. heterotropoides as independent species by the unique character from the 2 varieties above. Consequently, the genus Asarum in Korea is classified into 3 species and 7 forma.

Morphological characteristics and RAPD analysis of Epimedium spp. (국내외 수집 삼지구엽초의 형태적 특성 및 유연관계 분석)

  • Lim, Jung-Dae;Seong, Eun-Soo;Choi, Kwang-Joon;Kim, Seung-Kyung;Chung, Ill-Min;Heo, Kweon;Yu, Chang-Yeon
    • Korean Journal of Medicinal Crop Science
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    • v.8 no.2
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    • pp.102-108
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    • 2000
  • Morphological characteristics of nine Epimedium spp was analyzed on the basis of six morphological characters. To analyse the genetic relationship among Epimedium spp., polymerase chain reaction (PCR) was performed with total genomic DNA of 17 Epimedium spp. by using random 8 primers. The genetic diversity and genetic distance among nine Korean collections, seven Japanese and one China collection were used to generate a dendrogram showing phylogenie relationship. Seventeen Epimedium spp were classified into two groups of group I and II, since they were divided into two major groups at the similarity coefficients value of 0.65. In addition, one of the two group, group I was divided into three sub-groups including Epimedium koreanum, Chul-won collections 1, 2, and 3, Yanggu, Hongchon, Hwachun, Chunchon, China, Maehwa (Japanese), E. diphyllum and E. violaceum (Japanese), while group II included Chulwon collection 4 and 5 and Japanese collection. The samples collected at Chulwon district showed close similarity with Japanese collection. Similarity indexes between collection and genetic relationship were related at the levels ranging from 0.6 to 0.9.

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Characteristic evaluation of collected strains of Agaricus spp. based on ITS rDNA sequence (ITS 계통분석을 이용한 주름버섯류 수집균주의 특성평가)

  • Oh, Youn-Lee;Yoo, Young-Bok;Shin, Pyung-Gyun;Kong, Won-Sik;Choi, In-Geol
    • Journal of Mushroom
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    • v.12 no.4
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    • pp.244-250
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    • 2014
  • Phylogenic relationships and morphological characteristics were classified and investigated among the 233 collected strains of Agaricus spp. The 38 strains were differently identified as different characteristic group using analysis of ITS regions in rDNA. A. bitorquis was showed close relationship in groupA whereas A. campestris was in groupC as different characteristic group among with A. bisporus. There was no phylogentic difference with strains collected by country and different pileus colored Agaricus bisporus. Also the strains were cultivated twice to investigate morphological characteristics of fruiting bodies. The characteristics and yield of collected strains were compared with molecular varieties and seasons by the cultivation. In this result, A. campestirs showed good yield and quality in terms of hardness off-white mushroom was more harder than other number of A. bisporus. Also earliness and color of pileus was influenced by external environment all conditions.

Analysis of Genetic Relationship Among Collected Cymbidium goeringii Based on RAPD (RAPD를 이용한 춘란 수집종 20 품종의 유연관계 분석)

  • Kim, Tae Bok;Lee, Jin Jae;Song, Young Ju;Choi, Chang Hak;Cheong, Dong Chun;Yu, Young Jin
    • FLOWER RESEARCH JOURNAL
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    • v.19 no.4
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    • pp.225-230
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    • 2011
  • This research was performed for making data-base of cross-breeding between Cymbidium goeringii cultivars. Morphological characteristics were investigated and then genetic relationship was analyzed. Collected 20 Cymbidium goeringii cultivars were clustered into 2 groups. Seven cultivars were clustered into group I, and thirteen cultivars were clustered into group II. Group I doesn't have leaf pattern. Group have leaf pattern. The genetic relationship among collected 20 Cymbidium goeringii cultivars was anaylzed using RAPD with ten 10-mers random primer. Eighty-nine bands were generated by RAPD. Among the rest, three bands were monomorphic and eight-six bands were polymorphic. Overall similarity degree ranged from 0.521 to 0.862. The result of RAPD analysis was clustered into 2 groups, too. Sixteen cultivars were clustered into GroupX, and four cultivars were clustered into GroupY. Result of classification with morphological characteristics and RAPD showed different pattern, but 4 cultivars of GroupY by RAPD analysis were included in groupby morphological characteristics. Crossbreeding combination among low related coltivars in RAPD analysis may get more efficient result.