• Title/Summary/Keyword: incidence : Fusarium

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Complete genome sequence of Fusarium hypovirus DK2l strain and genomic diversity of dsRNA mycoviruses isolated from Fusarium graminearum

  • Lim, Won-Seok;Chu, Yeon-Mee;Lee, Yin-Won;Kim, Kook-Hyung
    • Proceedings of the Korean Society of Plant Pathology Conference
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    • 2003.10a
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    • pp.117.3-118
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    • 2003
  • We tested for the presence of double-stranded RNA (dsRNA) mycovirus in 827 Fusarium graminearum isolated from diseased barley and maize. dsRNA mycoviruses with various sizes were isolated. Of them, it was previously reported that dsRNA from DK2l isolate had pronounced morphological changes, including reduction in mycelial growth, increased to red pigmentation, reduced virulence and sporulation. (Chu et al., Appl. Environ. Microbiol. 2002). For better understanding of this hypovirulence associated with DK2l dsRNA virus, we determined the complete nucleotide sequence of dsRNA genome and named Fusarium hypovirus DK2l strain (Fhv-DK2l ). Genomic RNA of Fhv-DK2l was determined to be 6625 nucleotides in length excluding the poly (A) tail and contained three putative open reading frame. RNA-dependent RNA polymerase (RdRp) and helicase domain were expected in ORF A, 54 to 4709 nucleotide position. ORE B, 4752 to 5216 nucleotide position, and ORF C, 5475 to 6578 nucleotide position, were predicted to encode 16.7kDa and 41.3kDa protein respectively each. We could not detect any conserved domains from these two proteins. Phylogenetic analysis showed Fhv-DK2l was related to Cryphonectria hypovirus 3. Ten additional isolates were found that were infected with dsRNA mycoviruses. These mycoviruses contain 2 to 4 different segments of dsRNAs with the size range of approximately 1.7 to 10-kbp in length. The presence of dsRNAs isolates did not affect colony morphology and were transmissible through conidia and ascospore with incidence of 30-100%. These results indicate that there is genomic diversity of dsRNA mycoviruses that infect F. graminearum isolates and that impact of virus infection on host's morphology and virulence is determined by the interaction between dsRNAs and the fungal host, not by the mere presence of the dsRNAs

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Control of Fusarium Wilt of the Strawberry Caused by Fusarium oxysporum f. sp. fragariae of Solarization with Compost and Calcium Cyanamide Application (태양열 소독시 유기물과 석회질소 병행 처리에 의한 딸기 시들음병균 방제)

  • Nam, Myeong-Hyeon;Kim, Hyeon-Suk;Kim, Hong-Gi
    • Research in Plant Disease
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    • v.17 no.1
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    • pp.32-37
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    • 2011
  • Field experiments were conducted to evaluate the effectiveness of soil solarization at the Nonsan Strawberry Experiment Station, Korea in 2006 and 2008. In in vitro tests, exposure times to achieve an $LD_{100}$ of Fusarium oxysporum f. sp. fragariae were 6.6 days and 5.1 days at $45^{\circ}C$ and $50^{\circ}C$, respectively. A 100% lethal temperature was $46.7{\pm}0.1^{\circ}C$ for the same fungus. For field trials, solarization was conducted during the summer season using polyethylene mulch in a plastic house. The organic matter+calcium cyanamide+solarization treatment increased pH, organic matter, and calcium content compared to those before treatment in soil analysis, but no effect had an urea+solarization treatment. The temperatures at 10 cm depth were different in each treatment and the highest temperature was recorded from July 30 to August 10. The average temperature in organic matter+calcium cyanamide+solarization treatment at 10 cm depth was $3{\sim}4^{\circ}C$ higher than that in all the other treatments. All solarization treatments reduced the soil population of F. oxysporum f. sp. fragariae at 100% in 2008 relative to the non-treated control. All solarization treatments reduced Fusarium wilt incidence to 0% in 2006 and 2008. The effect of organic matter+calcium cyanamide+solarization against F. oxysporum f. sp. fragariae indicates that there may be future alternatives to traditional solarization for disease control as well as reducing the time needed.

Occurrence of Fungal Contamination in Ginseng Sprout and Mycotoxigenic Potential (새싹삼의 곰팡이 발생과 독소생성능)

  • Choi, Jang Nam;Kim, So soo;Choi, Jung-Hye;Baek, Seul Gi;Park, Jin Ju;Jang, Ja Yeong;Hyun, Jeong-Eun;Kim, Se-Ri;Kim, Jeom-Soon;Lee, Theresa
    • Journal of Food Hygiene and Safety
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    • v.36 no.5
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    • pp.407-417
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    • 2021
  • In order to investigate frequency of fungal contamination in ginseng sprout, we collected 18 types of retail ginseng sprouts and analyzed them. Overall frequency of fungal contamination ranged from 113.3 to 174.1% with the highest occurrence of Penicillium spp. Fungal detection rate was significantly higher in moss than in stem, leaf and root of ginseng sprout. Penicillium spp. occurred in leaf and stem with the highest incidence and Fusarium spp., in root. Among Penicillium spp. and Fusarium spp., P. olsonii and F. oxysporum were dominant, respectively. Nine Fusarium species, Aspergillus westerdijkiae, Aspergillus flavus, and 11 Penicillium species were identified by phylogenetic analysis. PCR screening of mycotoxigenic potential revealed that 19 out of 25 isolates tested were positive for respective mycotoxin biosynthetic gene. Two 2 A. flavus and 11 A. westerdijkiae isolates produced varying amount of aflatoxin or ochratoxin A in czapek yeast extract brothsome of which showed high levels of mycotoxin production. These results suggests a need for continuous monitoring and management program to control fungal contamination in the ginseng sprout production chain.

Effects of Heterodera trifolii on Fusarium wilt disease in radish plants (클로버씨스트선충이 무시들음병 발병에 미치는 효과)

  • Ko, Hyoung-Rai;Park, Eun-Hyeong;Kang, Eun-Hye;Choi, Hyo-Won;Lee, Youngkee;Kim, Jeomsoon;Hong, Sung Kee
    • Korean Journal of Environmental Biology
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    • v.39 no.1
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    • pp.1-5
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    • 2021
  • Radish is one of the major vegetable crops and has been damaged economically by the causal agent of Fusarium wilt disease, Fusarium oxysporum f. sp. raphani (FO) in the highlands of Gangwon province, Korea. Recently, clover cyst nematode, Heterodera trifolii(HT), occurred in highland of Jeongseon area and poses a threat to radish plants. The nematodes, besides causing direct damage to radish plants, possess the capability to synergize with other plant pathogens, leading to the development of a disease complex. The aim of this study was to investigate the interaction between FO and HT in radish plants. The length of plants co-infected with both FO and HT was shorter than that of plants infected with FO alone, but there was no statistically significant difference. However, the disease severity was much higher in the plants co-infected with both FO and HT(1.60±0.97) compared to FO alone(0.20±0.42)(df=3, F=10.17, p<0.001). Disease incidence was also about two-fold higher in plants co-infected with both FO and HT (80%) compared to FO alone (44%). These results suggested that the clover cyst nematode should be considered in the management of Fusarium wilt disease in the highlands of Gangwon province.

Screening for Effective Organic Farming Materials for the Control of Tuber Rot of Gastrodia elata Caused by Fusarium spp. (천마 괴경썩음병 방제에 효과적인 유기농업자재 선발)

  • Kim, Chang-Su;Lee, Han-Na;Kim, Hyo-Jin;Seo, Sang-Young;Jo, Jong-Hyun;Lee, Eun-Suk;Ahn, Min Sil;Kim, Hee-Jun
    • Korean Journal of Organic Agriculture
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    • v.29 no.4
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    • pp.561-574
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    • 2021
  • This study was conducted to evaluate the control efficacy of the organic farming materials (OFMs) on tuber rot of Gastrodia elata caused by Fusarium spp. The antifungal activities in vitro as well as the suppressive effect of 15 OFMs on the spore germination and germ tube growth by inoculating spore suspension on immature tubers in vivo were investigated. 7 OFMs inhibited the mycelial growth of Fusarium spp. and 7 of them were microbial agents. In the screening using immature tubers, 3 OFMs were very effective with control efficacy value of 70%. Among them, sulfur provided suppressive effect on both mycelial growth and spore germination against tuber rot of G. elata. Finally, 3 OFMs were selected to test the protective and curative effects, and all chosen OFMs significantly suppressed disease incidence when applied in the preventive action, in comparison with the curative action. Especially, sulfur and Bacillus subtilis gave excellent protective control efficacy with control values of 93.2% and 86.9%, respectively, whereas its curative control effect was relatively low (73.3%, 60.2%). On the other hand, the preventive and curative effects of citronella + paraffin oil + ethyl alcohol were 73.3% and 67.0%, respectively. This study suggests that tuber rot of G. elata can be controlled by some OFMs in the rain shelter greenhouse under continuous cultivation condition and protective treatment is more important and efficient.

Biocontrol Activities of Peribacillus butanolivorans KJ40, Bacillus zanthoxyli HS1, B. siamensis H30-3 and Pseudomonas sp. BC42 on Anthracnose, Bacterial Fruit Blotch and Fusarium Wilt of Cucumber Plants (Peribacillus butanolivorans KJ40, Bacillus zanthoxyli HS1, B. siamensis H30-3와 Pseudomonas sp. BC42에 의한 오이 탄저병, 박과류 과실썩음병과 오이 덩굴쪼김병의 생물방제 효과검정)

  • Jiwon Kim;Mee Kyung Sang
    • Research in Plant Disease
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    • v.29 no.2
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    • pp.188-192
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    • 2023
  • Abiotic and biotic stresses have been a serious threat to crop growth and productivity in the agricultural system. In this study, four strains (HS1, H30-3, KJ40, and BC42), which have biological activities related to disease suppression or alleviation of salinity and drought stresses, were tested for broad-spectrum biocontrol activity against anthracnose caused by Colletotrichum orbiculare, a bacterial fruit blotch caused by Acidovorax citrulli, and Fusarium wilt caused by Fusarium oxysporum in cucumber plants. As a result of test, when the four strains were drenched into the soil, anthracnose in cucumber leaves significantly decrease; strain KJ40 suppressed disease incidence by A. citrulli; strain BC42 significantly reduced bacterial fruit blotch and Fusarium wilt compared to control. Therefore, strain KJ40 could be a biocontrol candidate for controlling anthracnose through induced systemic resistance and the disease caused by A. citrulli as well as alleviating drought stress; strain BC42 has broad-spectrum biocontrol activity against anthracnose, Fusarium wilt, and bacterial fruit blotch.

Incidence and Intensity of Root Disease Complex due to Nematode and Soilborne Fungal Pathogens in Mulberry (Morus alba L.)

  • Naik, Vorkady Nishitha;Sharma, Dinesh Dutta;Govindaiah, Govindaiah
    • International Journal of Industrial Entomology and Biomaterials
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    • v.16 no.2
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    • pp.49-56
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    • 2008
  • A preliminary survey on the incidence and intensity of root disease complex (association of Meloidogyne incognita and root rot pathogens) was carried out in the sericultural areas of Karnataka. A total of 280 mulberry gardens were surveyed in 14 districts of Karnataka belonging to different types of soil (red sandy, red loamy and black cotton), farming systems (irrigated and rainfed), varieties (V-1, K-2, Local and S-13) and age of the plants (0-5, 5-10 and 10-15 years). It was observed that the association of M. incognita with Botryodiplodia theobromae and Fusarium solani causes the root disease complex in mulberry. Of the 280 gardens visited, 94 were infested with the disease complex and incidence was recorded as 33.6%. The higher intensity of root disease complex was observed when the root system had more than 100 galls/plant with infection of mixed population of B. theobromae and F. solani in sandy soil under irrigated farming. The 5-10 years old mulberry plantation with V-I variety was found to be most susceptible to root disease complex. Districts like Mysore, Kolar, Mandya, Tumkur, Chitradurga and Bangalore were observed as sensitive areas. Further, the wounds caused by M. incognita in mulberry roots favour the easy entry of root rot pathogens, which increased the severity of the disease very fast.

Effect of Siderophore on Biological Control of Plant Pathogens and Promotion of Plant Growth by Pseudomonas fluorescens ps88 (Pseudomonas fluorescens ps88이 생성하는 siderophore가 병원균의 생물학적 방제와 식물생육에 미치는 영향)

  • Seong, Ki-Young;Shin, Pyung-Gyun
    • Applied Biological Chemistry
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    • v.39 no.1
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    • pp.20-24
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    • 1996
  • Pseudomonas fluorescens ps88 was isolated from the rhizosphere soil produced the secondary metabolite called siderophore under iron Limited conditions. On iron limiting KMB medium this strain inhibited the growth of Pythium ultimum, Pyricularia oryzae, Rhizoctonia solani and Xanthomonas oryzae. Cucumber seeds were coated with the strain ps88 and were grown in green house soil. Forty days after the seed emergence, disease incidence caused by Fusarium oxysporium was reduced up to 50%. When the cucumber plants were grown in vermiculite, a significant fresh weight was increased. Root development of red pepper plants was also enhanced on MS medium supplemented with siderophore.

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Studies on the Root Rot of Ginseng(VII) (인삼근부병에 관한 연구. VII)

  • 이민웅
    • Korean Journal of Microbiology
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    • v.15 no.1
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    • pp.20-30
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    • 1977
  • Relationship of soil properties and seasonal variation on microbilogical population to-continuous culture and first-time culture of ginseng was investigated by bimonthly from May 1976 to January 1977. pH and P contents of 2 years continuous culture of soil were higher than other culture plot of soil, and contraty to the above, 2 years first-time culture of ginseng soil was conplot of soil, and contraty to the above, 2 years first-time culture of ginseng soil was contained more potassium contents than other culture plot of soil. In microbiological fluctuation with seasonr in various soil conditions, the population, trends of Fusarium spp., Erwiniaspp., and flourescent Psedudomonas spp. were increased in May and July in general, but decreased in the other month. It was observed that in all type of soil, Fusarium spp. was distributed in abundance in and on rihizosphere, and decreased the propagules numbers as soil depth increase. The numbers of Erwinia spp. and fluorescent Pseudo-monas spp. were distributed greater in numbers on the surface zone of soil depth decreasing the numbers along the soil layer increase, and also in 2years continuous culture of soil especially, a great numbers of Erwinia spp. and fluorescent Pseudomonas were evenly distributed in surface zone and rhizosphere. Ginseng disease with a high incidence of bacterial disease in continuous culture of 2 and 4 years was seemed to be associated with soil bacteria that was high in numbers of Erwinia spp. and fluorescent Pseudomonas spp. in May and July.

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