• 제목/요약/키워드: catalytic acid-site

검색결과 129건 처리시간 0.022초

Physical and catalytic properties of CMCase encoded by Bacillus subtilis gene in B. megaterium

  • 김훈;김하근;박무영
    • 한국미생물생명공학회:학술대회논문집
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    • 한국미생물생명공학회 1986년도 추계학술대회
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    • pp.524.3-524
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    • 1986
  • Carboxymethyl cellulase (CMCase) produced by cloned B. megaterium was found to contain 5.2% carbohydrate but no metal ion. The enzyme was isoelectric at pH 7.23 and was high is basic amino acids. The N-terminal of the enzyme was glutamic acid. The cellulolytic activity of this enzyme was extended to the small molecular substrates such as from cellotriose to cellopentaose. In additon, the enzyme showed transglycoslation activity. The pK values of the enzyme we estimated to be 4.4 and 6.7, andthat of the enzyme-substrate complex were 4.2 and 7.2, respectively. The enzyme was not affected by the treatment with iodoacetic acid, but the modification of enzyme with carbodiimide and diethyl pyrocarbonate resulted in a marked loss of the enzyme activity. These results suggest that the active site of enzyme essentially contains carboxylic and imidazole group of amino acid residues.

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깁사이트를 원료로 한 고온촉매용 담체의 제조 II, 비정질 알루미나의 담체 전구체로서의 특성 (Preparation of High-Temperature catalytic Support from Gibbsite II. Properties of Amophous Alumina as Precursor of Catalyst Support)

  • 김성연;김연식
    • 한국세라믹학회지
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    • 제33권1호
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    • pp.92-100
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    • 1996
  • Amorphous alumina(AA) the precursor of ${\gamma}$-alumina for catalyst support was made in the newly designed ball filled heating column. Some properties of AA as precursor were investigated. In observation of microstruc-ture and pore structure of AA and its derivatives scanning electronic microscope(SEM) and transmission electronic microscope(TEM) were used. It was found that the width of one particle in AA was 45~60$\AA$ and the average distance among the particles ranged 9~12 $\AA$ which suggested a micropore structure. When AA was reacted with water the shape of the surface was found to be altered and acicular bioehmite was formed inside AA which contributed inproved formability. Pore distribution was evaluated for the three samples of AA ground and granulated lump and La2O3 coated alumina. Acid sites were quantitatively determined by ammonia TPD method and the effect of impurity of Na on acid sites was discussed. Water adsorption capacity was evaluated in terms of a desiccant.

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Site-directed Mutagenesis of the Evolutionarily Conserved Tyr8 Residue in Rice Phi-class Glutathione S-transferase F3

  • Jo, Hyun-Joo;Pack, Mi-Jin;Seo, Jin-Young;Lim, Jin-Kyung;Kong, Kwang-Hoon
    • Bulletin of the Korean Chemical Society
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    • 제34권9호
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    • pp.2671-2674
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    • 2013
  • To elucidate the role of the evolutionarily conserved Tyr8 residue in rice Phi-class GSTF3, this amino acid was replaced with alanine and phenylalanine by site-directed mutagenesis, respectively. The replacement of Tyr8 with Ala significantly affected the catalytic activity and the kinetic parameters, whereas the substitutions of Tyr8 with Phe had almost no effect. The Y8A mutant resulted in approximately 90-100% decrease of the specific activity. Moreover, the Y8A mutant resulted approximately in 2-fold increase of $K_m$, approximately 60-80% decrease of $k_{cat}$, and approximately 6.5-fold decrease in $k_{cat}/K_m$. From the pH/log $k_{cat}/K_m$ plot, $pK_a$ values of the GSH in the wild-type enzyme-GSH complex, Y8A-GSH complex and Y8F-GSH complex were estimated to be approximately 6.8, 8.5 and 6.9, respectively. From these results, we suggest that the evolutionarily conserved Tyr8 residue in OsGSTF3 seems to influence the structural stability of the active site of OsGSTF3 rather than directly its catalytic activity.

산화크롬-질코니아 촉매의 산화-환원거동 (Redox Behavior of Chromium Oxide-Zirconia Catalyst)

  • 손종락;류삼곤
    • 공업화학
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    • 제3권4호
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    • pp.663-669
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    • 1992
  • 분말의 $Zr(OH)_4$$(NH_4)_2CrO_4$수용액에 함침시킨 후 공기중에 소성하여 질코니아에 담지된 산화크롬 촉매를 제조하였다. 제조된 $CrO_x/ZrO_2$ 촉매상에 cumene을 반응시켜 산화-환원 거동을 연구한 결과 크롬의 산화상태가 +6인 chromate형태로 질코니아 표면에 존재할 때는 강한 산점이 생성되어 cumene의 탈알킬화 반응에 촉매활성을 나타내었다. 그러나 많은 양의 $Cr^{6+}$종은 반응중에 탈수소로 생성된 $H_2$에 의하여 환원되어 $Cr^{3+}$종으로 변환되었으며 $Cr^{3+}$종은 cumene을 탈수소화시켜 ${\alpha}$-methyl styrene을 생성하는 반응에 활성점으로 작용하였다. 환원된 $Cr^{3+}$종은 $O_2$로 처리하면 다시 $Cr^{6+}$종으로 되고 따라서 산화된 촉매는 cumene의 탈알킬화 반응에 활성을 나타내었다.

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기상 포름알데히드 반응을 위한 활성탄에 담지한 P-V-Mo 촉매의 조성에 따른 영향 (Effects of Composition in P-V-Mo Catalysts Supported on Activated Carbon for Vapor Formaldehyde Reaction)

  • 이소은;김성수;정도영;강용;이승재
    • Korean Chemical Engineering Research
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    • 제57권6호
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    • pp.891-897
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    • 2019
  • 본 연구에서는 Phosphoric acid ($H_3PO_4$)와 Vanadium (V) pentoxide ($V_2O_5$), Molybdenum (VI) trioxide ($MoO_3$)으로 부터 조성을 달리하여, heteropoly acid의 PVMo 촉매를 활성탄 지지체에 담지하였다. 촉매의 반응성 조사를 위해, 기상의 포름알데히드를 $140^{\circ}C$의 온도에서 1시간 동안 반응시켰다. 반응전후의 촉매는 XRD와 BET 분석을 수행하였으며, 촉매의 산도 측정을 위해 $NH_3-TPD$을 수행하였다. 포름알데히드의 전환율은 $MoO_3$$H_3PO_4$ 성분이 감소하고 $V_2O_5$ 성분이 증가함에 따라 증가하였다. 대부분의 촉매에서 비교적 낮은 촉매 결정성이 관찰되었으며, 비표면적은 반응후 다소 감소하는 것으로 나타났다. $NH_3-TPD$ 분석 결과, $400^{\circ}C{\sim}500^{\circ}C$에 해당하는 강한 산점의 비율이 $MoO_3$$H_3PO_4$ 성분의 함량이 감소하고 $V_2O_5$ 성분의 함량이 증가함에 따라 증가하였다. 이러한 강한 산점의 비율이 포름알데히드의 전환율에 영향을 미치는 것으로 나타났다.

Investigation of the Protonated State of HIV-1 Protease Active Site

  • Nam, Ky-Youb;Chang, Byung-Ha;Han, Cheol-Kyu;Ahn, Soon-Kil;No, Kyoung-Tai
    • Bulletin of the Korean Chemical Society
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    • 제24권6호
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    • pp.817-823
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    • 2003
  • We have performed ab initio calculation on the active site of HIV-1 protease. The FEP method was used to determine the binding free energy of four different of protonated states of HIV-1 protease with inhibitor. The structure of the active site and hole structure was taken from the X-ray crystallographic coordinates of the C₂ symmetric inhibitor A74704 protease bound. The active site was modeled with the fragment molecules of binding pocket, acetic acid/ acetate anion (Asp25, Asp125), formamide (amide bond of Thr26/Gly27, Thr126/ Gly127), and methanol as inhibitor fragment. All possibly protonated states of the active site were considered, which were diprotonated state (0, 0), monoprotonated (-1, 0),(0, -1) and diunprotonated state (-1, -1). Once the binding energy Debind, of each model was calculated, more probabilistic protonated states can be proposed from binding energy. From ab-initio results, the FEP simulations were performed for the three following mutations: Ⅰ) Asp25 … Asp125 → AspH25 … Asp125, ⅱ) Asp25 … Asp125 → Asp25 … AspH125, ⅲ) AspH25 … Asp125 → AspH25 … AspH125. The free energy difference between the four states gives the information of the more realistic protonated state of active site aspartic acid. These results provide a theoretical prediction of the protonation state of the catalytic aspartic residues for A74707 complex, and may be useful for the evaluation of potential therapeutic targets.

NOx 제거용 WO3-TiO2 계 SCR 촉매 제조 및 열적열화거동연구 (Preparation and Thermal Degradation Behavior of WO3-TiO2 Catalyst for Selective Catalytic Reduction of NOx)

  • 신병길;김장훈;윤상현;이희수;신동우;민화식
    • 대한금속재료학회지
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    • 제49권8호
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    • pp.596-600
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    • 2011
  • Thermal degradation behavior of a $WO_3-TiO_2$ monolithic catalyst was investigated in terms of structural, morphological, and physico-chemical analyses. The catalyst with 4 wt.% $WO_3$ contents were prepared by a wet-impregnation method, and a durability test of the catalysts were performed in a temperature range between $400^{\circ}C$ and $800^{\circ}C$ for 3 h. An increase of thermal stress decreased the specific surface area, which was caused by grain growth and agglomeration of the catalyst particles. The phase transition from anatase to rutile occurred at around $800^{\circ}C$ and a decrease in the Brønsted acid sites was confirmed by structural analysis and physico-chemical analysis. A change in Brønsted acidity can affect to the catalytic efficiency; therefore, the thermal degradation behavior of the $WO_3-TiO_2$ catalyst could be explained by the transition to a stable rutile phase of $TiO_2$ and the decrease of specific surface area in the SCR catalyst.

Diethylpyrocarbonate Inactivation of Aspartase from Hafnia Alvei

  • Shim, Jae-Hee;Kim, Hyo-Joon;Yoon, Moon-Young
    • BMB Reports
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    • 제32권4호
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    • pp.326-330
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    • 1999
  • An aspartase purified from Hafnia alvei was inactivated by diethylpyrocarbonate (DEP) in a pseudo-first-order inactivation. The first-order plot was biphasic. The inactivation process was not saturable and the second order rate constant was $1.3\;M^{-1}s^{-1}$. The inactivated aspartase was reactivated with NH₂OH. The difference absorption spectrum of DEP-inactivated vs native enzyme preparations revealed a marked peak around 242 nm. The pH dependence of the inactivation rate suggests that an amino acid residue having a pK value of 7.2 was involved in the inactivation. L-aspartate, fumarate (substrates), and chloride ion (inhibitor) protected the enzyme against inactivation, indicating that histidine residues for the enzyme activity are located at the active site of this aspartase. Inspection of the presence and absence of $Cl^-$ ion demonstrated that the number of essential histidine residues is less than two. Thus, one or two histidines are in or near the aspartate binding site and participate in an essential step of the catalytic reaction.

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Site-directed Mutagenesis of Five Conserved Residues of Subunit I of the Cytochrome cbb3 Oxidase in Rhodobacter capsulatus

  • Ozturk, Mehmet;Gurel, Ekrem;Watmough, Nicholas J.;Mandaci, Sevnur
    • BMB Reports
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    • 제40권5호
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    • pp.697-707
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    • 2007
  • Cytochrome $cbb_3$ oxidase is a member of the heme-copper oxidase superfamily that catalyses the reduction of molecular oxygen to the water and conserves the liberated energy in the form of a proton gradient. Comparison of the amino acid sequences of subunit I from different classes of heme-copper oxidases showed that transmembrane helix VIII and the loop between transmembrane helices IX and X contain five highly conserved polar residues; Ser333, Ser340, Thr350, Asn390 and Thr394. To determine the relationship between these conserved amino acids and the activity and assembly of the $cbb_3$ oxidase in Rhodobacter capsulatus, each of these five conserved amino acids was substituted for alanine by site-directed mutagenesis. The effects of these mutations on catalytic activity were determined using a NADI plate assay and by measurements of the rate of oxygen consumption. The consequence of these mutations for the structural integrity of the $cbb_3$ oxidase was determined by SDS-PAGE analysis of chromatophore membranes followed by TMBZ staining. The results indicate that the Asn390Ala mutation led to a complete loss of enzyme activity and that the Ser333Ala mutation decreased the activity significantly. The remaining mutants cause a partial loss of catalytic activity. All of the mutant enzymes, except Asn390Ala, were apparently correctly assembled and stable in the membrane of the R. capsulatus.

Effect of His192 Mutation on the Activity of Alginate Lyase A1-III from Sphingomonas Species A1

  • Yoon, Hye-Jin;Choi, Yong-Jin;Osamu Miyake;Wataru Hashimoto;Kousaku Murata;Bunzo Mikami
    • Journal of Microbiology and Biotechnology
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    • 제11권1호
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    • pp.118-123
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    • 2001
  • The alginate lyase A1-III gene of Sphingomonas species A1 is composed of 1,077 nucleotides, encoding a protein (359 amino acids) with a molecular mass of 40,322 Da. Recombinant A1-III expressed in Escherichia coli exhibited the same full enzymatic activity as native A1-III. In order to identify the critical residue for activity, a site-directed mutation was introduced into the A1-III gene (H192A, His192->Ala). Recombinant A1-III (H192A) exhibited a significant decrease in enzyme activity (one-thirty thousandth of that of A1-III), without any conformational change, as detected by the CD spectra in the far UV region. Also, the chemical modification of wild-type A1-III with methyl 4-nitro benzene sulfonate resulted in a 40% decrease from the initial activity, whereas the same modification of A1-III (H192A) produced no change in the activity. The role of His192 on the catalytic process was also explored based on a model of A1-III docked with mannuronic acid into the active site.

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