• Title/Summary/Keyword: biological model

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A study on the Modeling of Nonlinear Properties of Biological Signal using Genetic Programming (유전자 프로그래밍을 이용한 생체 신호의 비선형 특성 모델링에 관한 연구)

  • Kim, Bo-Yeon;Park, Kwang-Suk
    • Proceedings of the KOSOMBE Conference
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    • v.1996 no.11
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    • pp.70-73
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    • 1996
  • Many researchers had considered biological systems as linear systems. In many cases of biological systems, the phenomena that show the regular and periodic dynamics are considered the normal state. However, some clinical experiments reported, in some cases, the periodic signals represented the abnormal state. We assume that signals from human body system are generated from deterministic, intrinsic mechanisms and can be represented a simple equation that show nonlinear dynamics dependent on control parameters. The objective of our study is to model a nonlinear dynamics correctly from the nonlinear time series using the genetic programming method; to find a simple equation of nonlinear dynamics using collected time series and its nonlinear characteristics. We applied genetic programming to model RR interval of ECG that shows chaotic phenomena. We used 4 statistic measures and 2 fractal measures to estimate fitness of each chromosome, and could obtain good solutions of which chaotic features are similar.

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Field tolerance of pesticides in the strawberry and comparison of biological half-lives estimated from kinetic models (Kinetic models에 의한 딸기 중 농약의 생물학적 반감기 비교와 생산단계잔류허용기준 설정)

  • Park, Dong-Sik;Seong, Ki-Young;Choi, Kyu-Il;Hur, Jang-Hyun
    • The Korean Journal of Pesticide Science
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    • v.9 no.3
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    • pp.231-236
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    • 2005
  • This study was conducted to determine the amounts of pesticide residues after treatment of criterion dose with 4 pesticides(tolclofos-m, folpet, procymidone, and triflumizole) under cultivated period and to compare the biological half-life of pesticides with 6 kinetic models(first, zero and second order kinetics, power function, elovich and parabolic model) and to establish proposed field tolerance using biological half-lives. Recovery of 4 pesticides form strawberry was ranged from 85.1 to 105.5%. For all of 4 pesticides, dissipation rate was over 73% at 5 days after application. Among 6 kinetic models, first order kinetic model (FO) was best fit to describe the relationship between residual pattern of pesticides and time. Therefore, half-lives were calculated by FO for establishing the field tolerance. These results showed that half-life should be calculated by comparative best fit kinetic model and field tolerance can help to prevent unacceptable agricultural products from marketing. It is good for both consumers and farmers having safe agricultural products and financial benefits, respectively.

Biological Infectious Watermarking Model for Video Copyright Protection

  • Jang, Bong-Joo;Lee, Suk-Hwan;Lim, SangHun;Kwon, Ki-Ryong
    • Journal of Information Processing Systems
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    • v.11 no.2
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    • pp.280-294
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    • 2015
  • This paper presents the infectious watermarking model (IWM) for the protection of video contents that are based on biological virus modeling by the infectious route and procedure. Our infectious watermarking is designed as a new paradigm protection for video contents, regarding the hidden watermark for video protection as an infectious virus, video content as host, and codec as contagion medium. We used pathogen, mutant, and contagion as the infectious watermark and defined the techniques of infectious watermark generation and authentication, kernel-based infectious watermarking, and content-based infectious watermarking. We experimented with our watermarking model by using existing watermarking methods as kernel-based infectious watermarking and content-based infectious watermarking medium, and verified the practical applications of our model based on these experiments.

Modeling for Biological Nitrogen Removal in Step-Feed Process (Step-Feed 공정에서의 생물학적 질소제거 Modeling)

  • Lee, Byung-Dae
    • Journal of the Korean Applied Science and Technology
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    • v.22 no.1
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    • pp.62-70
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    • 2005
  • Step-feed process for biological nitrogen removal were analyzed numerically for the each unit and final total nitrogen(TN) effluent by water quality management(WQM) model and the results were compared data from these wastewater treatment plants. No bugs and logic error were occurred during simulation work. All of the simulation results tried to two times were obtained and both results were almost same as this model has become good reappearance. It was concluded that most of nitrogen removal occurred in the first oxic tank. Thus the controlling of the first anoxic tank may be more important in term of nitrogen removal. Also each unit of simulation result was kept good relationship with that of measured data. Accordingly this WQM model has good reliance. Finally, WQM model can predict final TN effluent within ${\pm}6.0mg/{\ell}$.

Development and Validation of Hourly Based Sim-CYCLE Fine in a Temperate C3//C4 Coexisting Grassland

  • Lee, G.Z.;Lee, P.Z.;Kim, W.S;Oikawa, T.
    • The Korean Journal of Ecology
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    • v.28 no.6
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    • pp.353-363
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    • 2005
  • We developed a local-scale ecophysiological model, Sim-CYCLE Fine by modifying Sim-CYCLE which was developed for a global scale simulation. Sim-CYCLE fine is able to simulate not only carbon fluxes but also plant growth with various time-steps from an hour to a month. The model outputs of $CO_2$ flux and biomass/LAI were highly reliable; we validated the model results with measurements from the eddy covariance technique and the harvest method ($R^2$ values of around 0.9 for both). The results suggested that the phonology and the seasonal dynamics of the $C_3/C4$ plant communities affected significantly the carbon fluxes and the plant growth during the plant growing season.

Anti-septic activity of α-cubebenoate isolated from Schisandra chinensis

  • Kook, Minsoo;Lee, Sung Kyun;Kim, Sang Doo;Lee, Ha Young;Hwang, Jae Sam;Choi, Young Whan;Bae, Yoe-Sik
    • BMB Reports
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    • v.48 no.6
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    • pp.336-341
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    • 2015
  • Sepsis is a life-threatening, infectious, systemic inflammatory disease. In this study, we investigated the therapeutic effect of α-cubebenoate, a novel compound isolated from Schisandra chinensis against polymicrobial sepsis in a cecal ligation and puncture (CLP) experimental model. Administration of α-cubebenoate strongly enhanced survival in the CLP model. α-cubebenoate administration also markedly blocked CLP-induced lung inflammation and increased bactericidal activity by enhancing phagocytic activity and hydrogen peroxide generation in mouse bone marrow-derived macrophages and neutrophils. Expression of two important inflammatory cytokines, IL-1 and IL-6, was strongly increased in the CLP model, and this was dramatically blocked by α-cubebenoate. Lymphocyte apoptosis and caspase-3 activation, which are associated with immune paralysis during sepsis, were markedly attenuated by α-cubebenoate. Taken together, our findings indicate that α-cubebenoate, a natural compound isolated from Schisandra chinensis, is a powerful potential anti-septic agent. [BMB Reports 2015; 48(6): 336-341]

Development of the Structural Model of Adolescent's Risk Behavior (청소년의 위험행동 구조모형 구축)

  • Park, Hyun-Sook;Jung, Sun-Young
    • Journal of Korean Academy of Nursing
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    • v.41 no.3
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    • pp.364-373
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    • 2011
  • Purpose: In this study the fitness of a path model for the relationship among biological risk disposition, sociocultural risk factors, self-control, parent-adolescent communication, and risk behavior in adolescents was examined. Methods: The participants were 387 adolescents. The data were analyzed with the PASW 18.0 and AMOS 18.0 programs. Results: Sociocultural risk factors, self-control, and parent-adolescent communication showed a direct effect on risk behavior for adolescents, while biological risk disposition and sociocultural risk factor showed an indirect effect on risk behavior for adolescents. The modified path model of adolescents' risk behavior was showed a good fit with the model ($X^2$/df=2.37, GFI=.95, AGFI=.92, RMSEA=.06 [.05

Northward expansion trends and future potential distribution of a dragonfly Ischnura senegalensis Rambur under climate change using citizen science data in South Korea

  • Shin, Sookyung;Jung, Kwang Soo;Kang, Hong Gu;Dang, Ji-Hee;Kang, Doohee;Han, Jeong Eun;Kim, Jin Han
    • Journal of Ecology and Environment
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    • v.45 no.4
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    • pp.313-327
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    • 2021
  • Background: Citizen science is becoming a mainstream approach of baseline data collection to monitor biodiversity and climate change. Dragonflies (Odonata) have been ranked as the highest priority group in biodiversity monitoring for global warming. Ischnura senegalensis Rambur has been designated a biological indicator of climate change and is being monitored by the citizen science project "Korean Biodiversity Observation Network." This study has been performed to understand changes in the distribution range of I. senegalensis in response to climate change using citizen science data in South Korea. Results: We constructed a dataset of 397 distribution records for I. senegalensis, ranging from 1980 to 2020. The number of records sharply increased over time and space, and in particular, citizen science monitoring data accounted for the greatest proportion (58.7%) and covered the widest geographical range. This species was only distributed in the southern provinces until 2010 but was recorded in the higher latitudes such as Gangwon-do, Incheon, Seoul, and Gyeonggi-do (max. Paju-si, 37.70° latitude) by 2020. A species distribution model showed that the annual mean temperature (Bio1; 63.2%) and the maximum temperature of the warmest month (Bio5; 16.7%) were the most critical factors influencing its distribution. Future climate change scenarios have predicted an increase in suitable habitats for this species. Conclusions: This study is the first to show the northward expansion in the distribution range of I. senegalensis in response to climate warming in South Korea over the past 40 years. In particular, citizen science was crucial in supplying critical baseline data to detect the distribution change toward higher latitudes. Our results provide new insights on the value of citizen science as a tool for detecting the impact of climate change on ecosystems in South Korea.

A Novel Hyperspectral Microscopic Imaging System for Evaluating Fresh Degree of Pork

  • Xu, Yi;Chen, Quansheng;Liu, Yan;Sun, Xin;Huang, Qiping;Ouyang, Qin;Zhao, Jiewen
    • Food Science of Animal Resources
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    • v.38 no.2
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    • pp.362-375
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    • 2018
  • This study proposed a rapid microscopic examination method for pork freshness evaluation by using the self-assembled hyperspectral microscopic imaging (HMI) system with the help of feature extraction algorithm and pattern recognition methods. Pork samples were stored for different days ranging from 0 to 5 days and the freshness of samples was divided into three levels which were determined by total volatile basic nitrogen (TVB-N) content. Meanwhile, hyperspectral microscopic images of samples were acquired by HMI system and processed by the following steps for the further analysis. Firstly, characteristic hyperspectral microscopic images were extracted by using principal component analysis (PCA) and then texture features were selected based on the gray level co-occurrence matrix (GLCM). Next, features data were reduced dimensionality by fisher discriminant analysis (FDA) for further building classification model. Finally, compared with linear discriminant analysis (LDA) model and support vector machine (SVM) model, good back propagation artificial neural network (BP-ANN) model obtained the best freshness classification with a 100 % accuracy rating based on the extracted data. The results confirm that the fabricated HMI system combined with multivariate algorithms has ability to evaluate the fresh degree of pork accurately in the microscopic level, which plays an important role in animal food quality control.

Preliminary Ecological Assessments of Water Chemistry, Trophic Compositions, and the Ecosystem Health on Massive Constructions of Three Weirs in Geum-River Watershed

  • Ko, Dae-Geun;Choi, Ji-Woong;An, Kwang-Guk
    • Journal of Ecology and Environment
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    • v.39 no.1
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    • pp.61-70
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    • 2016
  • Major objectives of the study were to analyze chemical and biological influences of the river ecosystem on the artificial weir construction at three regions of Sejong-Weir (Sj-W), Gongju-Weir (Gj-W), and Baekje-Weir (Bj-W) during 2008-2012. After the weir construction, the discharge volume increased up to 2.9 times, and biological oxygen demand (BOD) and electrical conductivity (EC) significantly decreased (p < 0.05). Also, the decrease of total phosphorus (TP) was also evident after the weir construction, but still hyper-eutrophic conditions, based on criteria by , were maintained. Multi-metric model of Index of Biological Integrity (IBI) showed that IBI values averaged 21.0 (range: 20-22; fair condition) in the Bwc, and 14.3 (range: 12-18; poor condition) in the Awc. The model values of IBI in Sj-W and Gj-W were significantly decreased after the weir construction. The model of Self-Organizing Map (SOM) showed that two groups (cluster I and cluster II) of Bwc and Awc were divided in the analysis based on the clustering map trained by the SOM. Principal Component Analysis (PCA) was similar to the results of the SOM analysis. Taken together, this research suggests that the weir construction on the river modified the discharge volume and the physical habitat structures along with distinct changes of some chemical water quality. These physical and chemical factors influenced the ecosystem health, measured as a model value of IBI.