• 환경생물
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• 제17권1호
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• pp.1-9
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• 1999

산업활동의 부산물인 chlorofluorocarbons(CFCs)와 같은 물질들의 대기권 유입으로 오존층의 파괴가 극심해짐에 따라 자외선의 지표유입량이 증가되는 추세를 보이는데, 특히 중파자외선의 증가는 DNA, 단백질, 지질 등에 의한 흡수를 통하여 생물학적 폐해를 야기할 수 있다는 점에서 주목된다. 최근 측정 결과 우리나라 동해안에서 해수표면에 도달되는 중파자외선 광량의 1%가 수심 l0 m까지 침투하는 것으로 나타났는데, 이는 해양생태계 생산성의 대부분이 해양 수심의 상위 2.5%에 해당되는 투광대에 의존한다는 점을 감안할 때 자외선에 의한 막대한 생태학적 폐해를 예견하게 해준다. 실내배양실험 연구에서 중파자외선은 대형해조류의 생장 및 광합성을 억제하고 광합성 색소를 파괴하는 등의 생물독성학적 효과를 보였다. 반면, 자외선의 피해로부터 해조류를 보호해 주는 몇 가지 기작이 밝혀진 바 있는데, 어린시기의 갈조류 다시마는 청색광에 의한 광재활성화 능력을 함유한 것으로 보이고, 한국산 녹조 구멍갈파래와 홍조 도박류에서는 자외선을 강하게 차단하는 흡수물질이 형성됨을 알 수 있었다. 그러나 이러한 적응기능들이 해조류에서 보편적으로 나타나는 것인지에 대해서는 좀 더 연구가 필요하다. 해양생태계는 대기 중 CO$x_2$를 이용하여 1년에 약 100 Gt의 유기물질을 생산해내고, 인류가 소비하는 식품의 30%를 제공한다는 점에서 자외선에 의한 생물량의 감소는 해조류 뿐만 아니라 먹이망에 의해서 복잡한 연결구조를 지닌 생태계 전체의 붕괴를 야기할 수 있는 심각한 사안이라고 할 수 있다. 따라서, 자외선에 대한 피해를 연구 평가하여 전략을 세우고 이를 예측하는 예보시스템을 개발할 필요성이 절실히 부각된다.

• 한국미생물학회:학술대회논문집
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• 한국미생물학회 2008년도 International Meeting of the Microbiological Society of Korea
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• pp.23-25
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• 2008

Serum complement proteins comprise an important system that is responsible for several innate and adaptive immune defence mechanisms. There were three well described pathways known to lead to the generation of a C3 convertase, which catalyses the proteolysis of complement component C3, and leads to the formation of C3 opsonins (C3b, iC3b and C3d) that fix to bacteria. A pivotal step in the complement pathway is the assembly of a C3 convertase, which digests the C3 complement component to form microbial-binding C3 fragments recognized by leukocytes. The spleen clears microorganisms from the blood. Individuals lacking this organ are more susceptible to Streptococcus pneumoniae. Innate resistance to S. pneumoniae has previously been shown to involve complement components C3 and C4, however this resistance has only a partial requirement for mediators of these three pathways, such as immunoglobulin, factor B and mannose-binding lectin. Therefore it was likely that spleen and complement system provide resistance against blood-borne S. pneumoniae infection through unknown mechanism. To better understand the mechanisms involved, we studied Specific intracellular adhesion molecule-grabbing nonintegrin (SIGN)-R1. SIGN-R1, is a C-type lectin that is expressed at high levels by spleen marginal-zone macrophages and lymph-node macrophages. SIGN-R1 has previously been shown to be the main receptor for bacterial dextrans, as well as for the capsular pneumococcal polysaccharide (CPS) of S. pneumoniae. We examined the specific role of this receptor in the activation of complement. Using a monoclonal antibody that selectively downregulates SIGN-R1 expression in vivo, we show that in response to S. pneumoniae or CPS, SIGN-R1 mediates the immediate proteolysis of C3 and fixation of C3 opsonins to S. pneumoniae or to marginal-zone macrophages that had taken up CPS. These data indicate that SIGN-R1 is largely responsible for the rapid C3 convertase formation induced by S. pneumoniae in the spleen of mice. Also, we found that SIGN-R1 directly binds C1q and that C3 fixation by SIGN-R1 requires C1q and C4 but not factor B or immunoglobulin. Traditionally C3 convertase can be formed by the classical C1q- and immunoglobulin-dependent pathway, the alternative factor-B-dependent pathway and the soluble mannose-binding lectin pathway. Furthermore Conditional SIGN-R1 knockout mice developed deficits in C3 catabolism when given S. pneumoniae or its capsular polysaccharide intravenously. There were marked reductions in proteolysis of serum C3, deposition of C3 on organisms within SIGN-$R1^+$ spleen macrophages, and formation of C3 ligands. The transmembrane lectin SIGN-R1 therefore contributes to innate resistance by an unusual C3 activation pathway. We propose that in the SIGN-R1 mediated complement activation pathway, after binding to polysaccharide, SIGN-R1 captures C1q. SIGN-R1 can then, in association with several other complement proteins including C4, lead to the formation of a C3 convertase and fixation of C3. Therefore, this new pathway for C3 fixation by SIGN-R1, which is unusual as it is a classical C1q-dependent pathway that does not require immuno globulin, contributes to innate immune resistance to certain encapsulated microorganisms.

• Journal of Ginseng Research
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• 제44권2호
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• pp.282-290
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• 2020

Background: Ginseng is a commonly used herbal medicine in treating various medical conditions. Chronic gut inflammation is a recognized factor for the development of colorectal cancer (CRC). In this project, Asian ginseng berry polysaccharide preparations were used to assess their effects on CRC and related immune regulation mechanisms. Methods: Ginseng berry polysaccharide extract (GBPE) and purified ginseng berry polysaccharide portion (GBPP) were used to evaluate their activities on human HCT-116 and HT-29 CRC cell proliferation. Interleukin-8 secretion analysis was performed on HT-29 cells. Naive CD4 cell isolation and T-helper cell differentiation were performed and determined using flow cytometry for Th1 and Treg in addition to cell cycle and apoptotic investigation. Results: GBPE and GBPP significantly inhibited interleukin-8 secretion and cancer cell proliferation, inhibited CD4⁺IFN-γ⁺ cell (Th1) differentiation, and decreased CD4⁺FoxP3⁺ cell (Treg) differentiation. Compared to the GBPE, GBPP showed more potent antiinflammatory activities on the malignant cells. This is consistent with the observation that GBPP can also inhibit Th1-cell differentiation better, suggesting that it has an important role in antiinflammation, whereas Treg cells hinder the body's immune response against malignancies. Supported by cell cycle and apoptosis data, GBPE and GBPP, at various degrees, remarkably enhanced the anticancer activities of 5-fluorouracil. Conclusion: Data from this project suggested that Asian ginseng berry potentially has clinical utility in managing enteric inflammation and suppressing CRC through immunomodulation mechanisms.

• Animal Bioscience
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• 제37권1호
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• pp.28-38
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• 2024

Objective: Tibetan chickens, which have unique adaptations to extreme high-altitude environments, exhibit phenotypic and physiological characteristics that are distinct from those of lowland chickens. However, the mechanisms underlying hypoxic adaptation in the liver of chickens remain unknown. Methods: RNA-sequencing (RNA-Seq) technology was used to assess the differentially expressed genes (DEGs) involved in hypoxia adaptation in highland chickens (native Tibetan chicken [HT]) and lowland chickens (Langshan chicken [LS], Beijing You chicken [BJ], Qingyuan Partridge chicken [QY], and Chahua chicken [CH]). Results: A total of 352 co-DEGs were specifically screened between HT and four native lowland chicken breeds. Gene ontology and Kyoto encyclopedia of genes and genomes enrichment analyses indicated that these co-DEGs were widely involved in lipid metabolism processes, such as the peroxisome proliferator-activated receptors (PPAR) signaling pathway, fatty acid degradation, fatty acid metabolism and fatty acid biosynthesis. To further determine the relationship from the 352 co-DEGs, protein-protein interaction network was carried out and identified eight genes (ACSL1, CPT1A, ACOX1, PPARC1A, SCD, ACSBG2, ACACA, and FASN) as the potential regulating genes that are responsible for the altitude difference between the HT and other four lowland chicken breeds. Conclusion: This study provides novel insights into the molecular mechanisms regulating hypoxia adaptation via lipid metabolism in Tibetan chickens and other highland animals.

• 한국응용곤충학회지
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• 제42권4호
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• pp.367-381
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• 2003

곤충의 분산다형성이란 비상능력과 관련된 다형성으로 그 구체적 내용으로는 시다형성, 비상근다형성 그리고 비상행동변이성 등과 이들과는 별개로 개체군 밀도의존적인 상변이성이 있다. 분산다형성은 시간적으로나 공간적으로 이질적인 서식처 환경에 대응하기 위하여 이동형인 “유시형이나 장시형”과 정주형인 “무시형이나 단시형”을 생활사에 적절히 짜넣은 적응적 형질이다. 점변태곤충류에서는 유충과 성충의 생태학적지위가 중복되여 있어 유충과 성충이 생활공간과 그 밖의 요구조건을 달리하고 있는 완전변태류나 반변태류에 비하여 분산다형성의 예가 대단히 많다. 무시형 또는 단시형곤충은 같은 종의 유시형 또는 장시형곤충에 비하면 초산연령이 빠르고 총산란수도 많은 것이 보통이여서 자연증가율(r)이 크다. 단시형과 관련된 환경요인으로는 서식처의 시간적 영속성이나 공간적 이질성, 먹이조건, 개체군밀도, 온도, 일장 기타 여러 가지가 알려지고 있다 서식처의 환경조건에 대한 분산다형성발현상은 종에 따라 다를 뿐 아니라 암수간에도 차가 있고 같은 종에서도 계통간에 차가 있는 극히 탄력적인 현상이다. 분산다형성의 문제는 생리학, 유전학 그리고 생태학등에 걸친 폭넓은 학문분야로 특히 생태유전학이나 정량유전학분야치 연구는 분산다형성의 유전적본질 구명에 중요하다 하겠다.

• 한국인터넷방송통신학회논문지
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• 제18권4호
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• pp.19-26
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• 2018

최근 몇 년 동안, 인구 평균 연령의 급격히 증가하면서 다른 연령대의 사람들과 비교할 때 고령자가 더 많아지고 있다. 그 결과 산업계와 학계 모두 노인에게 건강하고 안전한 생활 방식을 제공하기 위한 여러 가지 해결 방법개발에 집중하고 있다. 전천후 생활보조 접근법은 혁신적인 기술과 서비스를 개발함으로써 노인들의 삶의 질을 향상시키고 건강 상태를 모니터링 하는 방법이다. 전천후 생활보조 기술은 또한 노인을 위한 더 많은 안전을 제공하고 응급대응 메커니즘, 추락 탐지 솔루션 및 비디오 감시 시스템을 제공할 수 있다. 불행히도 전천후 생활보조 데이터의 민감한 특성으로 인해, 전천후 생활보조 시스템은 무결성, 기밀성, 가용성, 익명 성 등과 같은 보안 요구 사항을 충족해야한다. 본 논문에서는 전천후 생활보조 시스템을 위한 적응형 인증 프로토콜을 제안한다. 제안된 인증 프로토콜은 전천후 생활보조 시스템에 필수적인 몇 가지 중요한 보안 요구 사항을 지원할 뿐만 아니라 다양한 유형의 공격으로부터 안전하다. 또한 보안 분석 결과를 통해 제안된 인증 프로토콜이 기존 프로토콜보다 더 효율적이고 안전하다는 것을 보여준다.

• 한국정보과학회논문지:정보통신
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• 제30권4호
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• pp.461-473
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• 2003

멀티미디어 어플리케이션은 문자 위주의 어플리케이션과는 달리 데이타의 연속성 때문에 QoS(Quality of Service)에 매우 민감하다. 셀룰러 이동망에서 고속으로 이동중인 사용자의 멀티미디어 어플리케이션에 대해 QoS를 지속적으로 제공하기 위해서는 효율적인 호 수락 기법이 필요하다. 본 논문은 우선순위를 이용한 호 수락 제어를 통해 MH(Mobile Host)에게 지속적인 QoS를 제공하는 2SCA(2-Step Call Admission) 기법을 제시한다. 본 논문에서는 셀의 크기가 작고, 서로 중첩되어 있는 셀 구조를 가정하였으며, MH의 호를 신규호, 핸드오프호 및 QoS 상향조정호로 분류하여 각각 다른 처리 기법을 적용하였다. 2SCA 기법은 기본 호 수락제어와 응용 호 수락제어로 구성되어 있다. 전자는 셀의 가용 대역폭에 따라 호 수락을 결정하며, 후자는 기본 호 수락제어에서 블록킹된 호를 대상으로 각 호의 종류에 따라 DTT(Delay Tolerance Time), PQueue(Priority Queue), UpQueue(Upgrade Queue) 알고리즘을 적용하여 호 수락을 결정한다. 본 논문에서 제시된 2SCA 기법의 성능을 평가하기 위해, 신규호 블록킹률, 핸드오프호 드롭핑률, 대역폭 이용률을 측정하였다. 시뮬레이션 결과, 본 논문의 호 수락 기법이 CSP(Complete Sharing Policy), GCP(Guard Channel Policy) 그리고 AGCP(Adaptive Guard Channel Policy) 등과 같은 기존의 메커니즘보다 우수함을 알 수 있었다.

• International Journal of Control, Automation, and Systems
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• 제6권6호
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• pp.809-817
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• 2008

Program plagiarism is widespread due to intelligent software and the global Internet environment. Consequently the detection of plagiarized source code and software is becoming important especially in academic field. Though numerous studies have been reported for detecting plagiarized pairs of codes, we cannot find any profound work on understanding the underlying mechanisms of plagiarism. In this paper, we study the evolutionary process of source codes regarding that the plagiarism procedure can be considered as evolutionary steps of source codes. The final goal of our paper is to reconstruct a tree depicting the evolution process in the source code. To this end, we extend the well-known bioinformatics approach, a local alignment approach, to detect a region of similar code with an adaptive scoring matrix. The asymmetric code similarity based on the local alignment can be considered as one of the main contribution of this paper. The phylogenetic tree or evolution tree of source codes can be reconstructed using this asymmetric measure. To show the effectiveness and efficiency of the phylogeny construction algorithm, we conducted experiments with more than 100 real source codes which were obtained from East-Asia ICPC(International Collegiate Programming Contest). Our experiments showed that the proposed algorithm is quite successful in reconstructing the evolutionary direction, which enables us to identify plagiarized codes more accurately and reliably. Also, the phylogeny construction algorithm is successfully implemented on top of the plagiarism detection system of an automatic program evaluation system.

• Asian Pacific Journal of Cancer Prevention
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• 제15권6호
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• pp.2911-2916
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• 2014

Oxaliplatin is a first-line therapy for colorectal cancer, but cancer cell resistance to the drug compromises its efficacy. To explore mechanisms of drug resistance, we treated colorectal cancer cells (HCT116 and SW620) long-term with oxaliplatin and established stable oxaliplatin-resistant lines (HCT116-OX and SW620-OX). Compared with parental cell lines, $IC_{50}$s for various chemotherapeutic agents (oxaliplatin, cisplatin and doxorubicin) were increased in oxaliplatin-resistant cell lines and this was accompanied by activation of nuclear factor erythroid-2 p45-related factor 2 (Nrf2) and NADPH quinone oxidoreductase 1 (NQO1). Furthermore, luteolin inhibited the Nrf2 pathway in oxaliplatin-resistant cell lines in a dose-dependent manner. Luteolin also inhibited Nrf2 target gene [NQO1, heme oxygenase-1 (HO-1) and $GST{\alpha}1/2$] expression and decreased reduced glutathione in wild type mouse small intestinal cells. There was no apparent effect in Nrf2-/- mice. Luteolin combined with other chemotherapeutics had greater anti-cancer activity in resistant cell lines (combined index values below 1), indicating a synergistic effect. Therefore, adaptive activation of Nrf2 may contribute to the development of acquired drug-resistance and luteolin could restore sensitivity of oxaliplatin-resistant cell lines to chemotherapeutic drugs. Inhibition of the Nrf2 pathway may be the mechanism for this restored therapeutic response.

• 한국자원식물학회지
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• 제23권6호
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• pp.526-534
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• 2010

Genomes of clusters of related eukaryotes are now being sequenced at an increasing rate. In this paper, we developed an accurate, low-cost method for annotation of gene prediction and exon-intron structure. The gene prediction was adapted for delta 1-pyrroline-5-carboxylate-synthetase (p5cs) gene from China wild-type of the halophytic Leymus chinensis (Trin.), naturally adapted to highly-alkali soils. Due to complex adaptive mechanisms in halophytes, more attentions are being paid on the regulatory elements of stress adaptation in halophytes. P5CS encodes delta 1-pyrroline-5-carboxylate-synthetase, a key regulatory enzyme involved in the biosynthesis of proline, that has direct correlation with proline accumulation in vivo and positive relationship with stress tolerance. Using analysis of reverse transcription-polymerase chain reaction (RT-PCR) and PCR, and direct sequencing, 1076 base pairs (bp) of cDNA in length and 2396 bp of genomic DNA in length were obtained from direct sequencing results. Through gene prediction and exon-intron structure verification, the full-length of cDNA sequence was divided into eight parts, with seven parts of intron insertion. The average lengths of determinated coding regions and non-coding regions were 154.17 bp and 188.57 bp, respectively. Nearly all splice sites displayed GT as the donor sites at the 5' end of intron region, and 71.43% displayed AG as the acceptor sites at the 3' end of intron region. We conclude that this method is a cost-effective way for obtaining an experimentally verified genome annotation.