• KOREAN JOURNAL OF CROP SCIENCE
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• v.35 no.2
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• pp.132-136
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• 1990

This experiment was conducted to study the multiplication and spread of bacterial population in water exuded through the hydathode of infected leaf of Xanthomonas campestris pv. oryzae in resistant and susceptible rice cultivars to bacterial leaf blight. The results obtained are summarized as follows. The bacterial multiplication in resistant cultivars was almost constant from three days to twelve days after inoculation with population of 10$^3$-10$^4$cfu/$\textrm{cm}^2$, but the multiplication was increased as days after inoculation extended in susceptible cultivars. The speed of bacterial multiplication and the number of bacteria spread above and below the inoculated position were closely related with the resistance of rice cultivars to bacterial leaf blight. The bacterial multiplication and spread were observed throughout the all growing stages including seedling, maximum tillering and flag leaf stages. The bacterial populations in water exuded through the hydathode were dependent on the multiplication and spread, and the populations were also closely related with the resistance of rice cultivars.

• Journal of Microbiology and Biotechnology
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• v.23 no.1
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• pp.22-28
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• 2013

Xo2276 is a putative transcription activator-like effector (TALE) in Xanthomonas oryzae pv. oryzae (Xoo). Xo2276 was expressed with a TAP-tag at the C-terminus in Xoo cells to enable quantitative analysis of protein expression and secretion. Nearly all TAP-tagged Xo2276 existed in an insoluble form; addition of rice leaf extracts from a Xoosusceptible rice cultivar, Milyang23, significantly stimulated secretion of TAP-tagged Xo2276 into the medium. In a T3SS-defective Xoo mutant strain, secretion of TAPtagged Xo2276 was blocked. Xo2276 is a Xoo ortholog of Xanthomonas campestris pv. vesicatoria (Xcv) AvrBs3 and contains a conserved DNA-binding domain (DBD), which includes 19.5 tandem repeats of 34 amino acids. Xo2276- DBD was expressed in E. coli and purified. Direct in vitro recognition of Xo2276-DBD on a putative target DNA sequence was confirmed using an electrophoretic mobility shift assay. This is the first study measuring the homologous expression and secretion of Xo2276 in vitro using rice leaf extract and its direct in vitro binding to the specific target DNA sequence.

• The Plant Pathology Journal
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• v.24 no.2
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• pp.143-151
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• 2008

To define the functions of the rpf genes in Xanthomonas oryzae pv. oryzae (Xoo), which regulates pathogenicity factors in Xanthomonas campestris pv. campestris (Xcc), marker-exchange mutants of each rpf gene were generated. When the mutants were inoculated on a susceptible cultivar, the lesion lengths caused by the rpfB, rpfC, rpfF, and rpfG mutants were significantly smaller than those caused by the wild type, whereas those caused by the rpfA, rpfD, and rpfI mutants were not. Several virulence determinants, including extracellular polysaccharide (EPS) production, xylanase production, and motility, were significantly decreased in the four mutants. However, the cellulase activity in the mutants was unchanged. Complementation of the rpfB and rpfC mutations restored the virulence and the expression of the virulence determinants. Expression analysis of 14 virulence genes revealed that the expression of genes related to EPS production (gumG and gumM), LPS (xanA, xanB, wxoD, and wxoC), phytase (phyA), xylanase (xynB), lipase (lipA), and motility (pitA) were reduced significantly in the mutants rpfB, rpfC, rpfF, and rpfG. In contrast, the expression of genes related to cellulase (eglxob, clsA), cellobiosidase (cbsA), and iron metabolism (fur) was unchanged. The results of this study clearly show that rpfB, rpfC, rpfF, and rpfG are important for the virulence of Xoo KACC10859, and that virulence genes are regulated differently by the Rpfs.

• Journal of Applied Biological Chemistry
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• v.59 no.2
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• pp.149-154
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• 2016

An endophytic bacterial strain was isolated from kimchi, a Korean traditional fermented Brassica campestris and identified as Bacillus subtilis MJMP2 based on the 16S rRNA sequence. This strain showed strong antagonistic activity against Xanthomonas oryzae pv. oryzae (Xoo) KACC10331, the pathogen of bacterial rice blight disease, as well as activity against some other rice phytopathogenic fungi. The active compound was purified through size-exclusion chromatography and preparative High-performance liquid chromatography. The molecular weight was determined as m/z 1043 by mass spectroscopy, which is identical to that of iturin A. Furthermore, a crude extract from the culture supernatant of Bacillus subtilis MJMP2 showed inhibitory activity against rice blight disease in both a rice leaf explant assay and a pot assay. The crude extract also enhanced the length of roots of Arabidopsis thaliana. These results suggest that the strain Bacillus subtilis MJMP2 could be used as a biological agent to control rice blight disease.

• Mycobiology
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• v.43 no.3
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• pp.311-318
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• 2015

Culture filtrates of six different edible mushroom species were screened for antimicrobial activity against tomato wilt bacteria Ralstonia solanacearum B3. Hericium erinaceus, Lentinula edodes (Sanjo 701), Grifola frondosa, and Hypsizygus marmoreus showed antibacterial activity against the bacteria. Water, n-butanol, and ethyl acetate extracts of spent mushroom substrate (SMS) of H. erinaceus exhibited high antibacterial activity against different phytopathogenic bacteria: Pectobacterium carotovorum subsp. carotovorum, Agrobacterium tumefaciens, R. solanacearum, Xanthomonas oryzae pv. oryzae, X. campestris pv. campestris, X. axonopodis pv. vesicatoria, X. axonopodis pv. citiri, and X. axonopodis pv. glycine. Quantitative real-time PCR revealed that water extracts of SMS (WESMS) of H. erinaceus induced expressions of plant defense genes encoding ${\beta}$-1,3-glucanase (GluA) and pathogenesis-related protein-1a (PR-1a), associated with systemic acquired resistance. Furthermore, WESMS also suppressed tomato wilt disease caused by R. solanacearum by 85% in seedlings and promoted growth (height, leaf number, and fresh weight of the root and shoot) of tomato plants. These findings suggest the WESMS of H. erinaceus has the potential to suppress bacterial wilt disease of tomato through multiple effects including antibacterial activity, plant growth promotion, and defense gene induction.

• Korean Journal Plant Pathology
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• v.2 no.3
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• pp.150-157
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• 1986

Effects of presservation methods on viability and virulence of Xanthosmonas compestris pv. oryzae were investigated. The incidence of colony-type variants from freeze-dried and deep-frozen cultures was also determined. The suspending medium for freeze-dried cultures containing $10\%$ sucrose and $1\%$ gelatin showed the highest viability, and the virulence was well maintained in the suspending medium containing $2\%$ dextrin, $0.5\%$ ascorbic acid, 0.5% ammonium chloride, $0.5\%$ thiourea, and $0.85\%$ NaCl. Serially transferred cultures became attenuated. Rough colonies which had wrinkled surface occurred at a frequency of $1.9\%$ to $15.8\%$ during freeze-drying and freezing. The rough colonies consisted of nonseptated filamentous cells and rod-shaped cells. The virulence of rough colonies was weak as compared with the normal colony type.

• Korean journal of applied entomology
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• v.23 no.3 s.60
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• pp.147-152
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• 1984

Six hundred and twenty five isolates of Xanthomonas campestris pv. oryzae, cauing bacterial leaf blight (BLB) of rice, were classified into five pathotypes during $1979\~1983$ in Korea. Among them, 483 isolates$(77.3\%)$ were classified as pathotype I, 83 $(13.3\%)$ as pathotype II, 54$(8.6\%)$ as pathotype III, 3 $(0.5\%)$ as pathotype IV and 2$(0.3\%)$ as pathotype V. Pathotype I was the most prevalent throughout the country. Pathotype III was widely distributed in the western or southern parts of Korea, particularly in Jeonnam, Chungnam and Gyeongnam provinces. One isolate of pathotype IV was found in Gyeongnam in 1980, and two isolates were found in Jeonnam in 1981. Most of the isolates were obtained from Milyang 23 varietal group, while the isolates of pathotype III were collected from Yushin and Tongil varietal group.

• Korean journal of applied entomology
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• v.24 no.2 s.63
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• pp.97-101
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• 1985

Pathogenic variations of Xanthomonas campestris pv. oryzae were observed to Korean rice cultivars depending upon isolates in the same pathotype of the pathogen grouped by reactions of Japanese rice differentials. Using 201 Korean isolates of X. campestris pv oryzae 1,307 rice cultivars and promising lines were inoculated, and they were grouped into four varietal groups based on reactions. Of rice cultivars showing similar reactions to X. campestris pv. oryzae, five Korean rice cultivars Milyang 42, Hangangchalbyeo, Pungsanbyeo, Cheongcheongbyeo, and Milyang 23 were selected for classification of the pathogen into races The isolates only virulent to Milyang 23 were designated as race K1, the isolates virulent to Cheongcheongbyeo and Milyang 23 were designated as race K2, the isolates virulent to Pungsanbyeo, Cheongcheongbyeo and Milyang 23 were designated as race K3, the isolates virulent to Hangangchalbyeo, Pungsanbyeo, Cheongcheongbyeo and Milyang 23 were designated as race K4, and the isolates virulent to Milyang 42, Hangangchalbyeo, Pungsanbyeo, Cheongcheongbyeo and Milyang 23 were designated as race K5. Of 201 isolates tested, 114 isolates (56.7%) were classified as race K1, 47 isolates (23.4%) as race K2, 38 isolates (18.9%) as race K3, and 2 isolates (1.0%) as race K4. Reaction in each rice cultivar used as differentials in this test was also compared with that of rice differentials used for classification of X. campestris pv. oryzae into pathotypes in the previous work.

• Korean Journal of Agricultural Science
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• v.16 no.1
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• pp.36-43
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• 1989

Out of 826 isolates of Streptomyces isolated from different soils, their distribution and antibiotic productivity were investigated. Distribution of the organism in the soil was affected by the soil conditions and plants. The highest isolation frequency was occurred from Quercus forest, Robinia forest and grass field, while soils from orchards and cultivating fields showed low density of Streptomyces. More than 49% of the isolates showed antibacterial activity against Bacillus subtilis, Erwinia carotovora subsp. carotovora and Xantomonas campestris pv. oryzae and about 40% of the isolates showed antiyeasty activity against Saccharomyces cerevisiae but only a few isolates showed antibiotic activity against E. coli and Pseudomonas solanacearum. Forty isolates of the Streptomyces showed strong antifungal activity against Pyricularia oryzae. Rate of isolation of Streptomyces was the highest on starch agar among the eight media tested. Antibiotic productivity of the isolates was the highest on potato sucrose agar medium among the 5 media tested.

• Applied Biological Chemistry
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• v.50 no.4
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• pp.262-267
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• 2007

To access the natural product antibiotics produced by uncultured microorganisms, six cosmid libraries of DNA extracted directly from soil samples (environmental DNA, eDNA) were constructed and screened for the production of antibacterial active molecules. Of the approximately 60,000 clones screened, one antibacterial clone (YS92B) was detected. Ethyl acetate extracts of clone YS92B showed antibacterial activity against various pathogenic bacteria (Listeria monocytogenes, Bacillus subtilis, Pseudomonas syringae, Xanthomonas campestris pv. oryzae, Staphylococcus epidemis). Active constituents from cultures of YS92B were isolated and purified using a bioassay-guided fractionation against B. subtilis through a series of procedures (ethyl acetate extraction, Sephadex LH20 column chromatography, High Performance Liquid Chromatography). NMR (Nuclear Magnetic Resonance) spectral analysis of a major antibacterial active YS92B-VII indicated that it is a lauric acid linked to tyrosine. This report describes the characterization of antibacterially active long chain N-acyl derivatives of tyrosine that are produced by eDNA clones hosted in Escherichia coli from Korean soils.