• 제목/요약/키워드: TEF $1-{\alpha}$

검색결과 42건 처리시간 0.02초

콩 시들음병에 관여하는 Fusarium균의 다양성 및 병원학적 특성 (Diversity and Pathogenic Characteristics of Fusarium Species isolated from Wilted Soybeans in Korea)

  • 최효원;김승노;홍성기
    • 한국균학회지
    • /
    • 제48권3호
    • /
    • pp.297-312
    • /
    • 2020
  • 2014년부터 2016년까지 국내 콩 재배 포장에서 시들음 증상을 보이는 시료에서 진균을 분리한 결과, Fusarium spp., Colletotrichum spp., Rhizoctonia spp., Macrophomina sp., Phytophthora spp., Calonectria ilicicola가 분리되었고, Fusarium균이 79.1%로 가장 많이 분리되었다. 53개의 Fusarium균을 균학적 특성에 의해 동정한 결과, F. solani, F. oxysporum, F. graminearum, F. fujikuroi 등 4개의 종 복합체(species complex)로 동정되었다. 염기서열분석을 통한 종 동정을 위해 translation elongation factor 1 alpha (TEF) 유전자 부위를 계통분석한 결과, F. solani, F. oxysporum, F. commune, F. asiaticum, F. fujikuroi 등 5종으로 확인되었다. 44개 Fusarium균주의 병원성을 확인하기 위하여 콩 3개 품종을 대상으로 유묘 침지 접종한 결과, F. asiaticum은 병원성이 없거나 미미한 것으로 나타났다. 병원성이 있는 10개 균주를 선발하여 기주범위를 조사한 결과, F. solani, F. oxysporum, F. commune은 콩에만 병원성이 있었고, F. fujikuroi는 콩, 강낭콩, 황동부콩, 흑동부콩 및 팥에 병원성을 보였다. 또한 13개 콩 품종을 대상으로 저항성 검정을 수행한 결과, F. commune과 F. fujikuroi는 모든 품종에 병을 일으켰다. 장기콩, 풍산나물콩, 소청자콩은 Fusarium에 의한 시들음병에 비교적 저항성이 것으로 나타났고, 황금올콩, 참올콩은 감수성 품종으로 확인되었다.

Diaporthe taoicola and D. siamensis, Two New Records on Citrus sinensis in China

  • Cui, Meng Jiao;Wei, Xin;Xia, Peng Liang;Yi, Ji Ping;Yu, Zhi He;Deng, Jian Xin;Li, Qi Li
    • Mycobiology
    • /
    • 제49권3호
    • /
    • pp.267-274
    • /
    • 2021
  • Two Diaporthe species isolated from fruit of Citrus sinensis in China were characterized based on morphology and multilocus phylogeny of ITS, tef1, and tub2 gene sequences. The phylogeny indicated that the two species match Diaporthe taoicola and D. siamensis. A critical examination of phenotypic characteristics confirmed the phylogenetic results. Diaporthe taoicola was morphologically characterized by producing Alpha conidia with tapering toward both ends. Meanwhile, D. siamensis produced cylindrical or ellipsoidal Alpha conidia with two oil drops. Pathogenicity tests revealed that both species were pathogenic to fruit of C. sinensis. To our knowledge, the two species were firstly reported on Citrus sinensis in China.

Pestalotiopsis kaki sp. nov., a Novel Species Isolated from Persimmon Tree (Diospyros kaki) Bark in Korea

  • Das, Kallol;Lee, Seung-Yeol;Jung, Hee-Young
    • Mycobiology
    • /
    • 제49권1호
    • /
    • pp.54-60
    • /
    • 2021
  • During the screening of Korean microflora, a fungal strain (KNU-PT-1804) belonging to the genus Pestalotiopsis was isolated from persimmon tree (Diospyros kaki) bark collected from North Gyeongsang Province, Korea. The strain, KNU-PT-1804, produced smaller conidia compared with related species P. kenyana, P. neglecta, and P. telopeae. The novelty of the strain was confirmed based on phylogenetic analysis using molecular datasets of internal transcribed spacer (ITS) regions, β-tubulin (TUB2), and translation elongation factor 1-alpha (TEF1α) genes. Molecular phylogeny strongly supports that the strain is distinct from previously known Pestalotiopsis species, and we proposed the novel species, Pestalotiopsis kaki sp. nov., and provide a detailed description and illustration.

Diaporthe eleutharrhenae sp. nov. Associated with a Critically Endangered Liana in China

  • Song, Shijie;Landrein, Sven
    • Mycobiology
    • /
    • 제50권2호
    • /
    • pp.99-103
    • /
    • 2022
  • A new fungus isolated from the leaves of Eleutharrhena macrocarpa in southern Yunnan, China is described using morphological and molecular evidence. Phylogenetic trees based on the combined nuclear ribosomal DNA internal transcribed spacer (ITS), translation elongation factor-1α (TEF1), and β-tubulin gene (TUB2) sequences showed that Diaporthe eleutharrhenae sp. nov. is sister to Diaporthe chinensis N.I. de Silva, Lumyong & K.D. Hyde and morphologically differs in shorter alpha conidia (5-8.5× 1.5-2 ㎛) and the presence of beta conidia. This study also resolves a nomenclatural problem, as two taxa were published using the same name. To avoid confusion, the unrelated D. chinensis H. Dong, J. W. Xia & X. G. Zhang is here renamed as D. dongii (H. Dong, J. W. Xia & X. G. Zhang) S. J. Song & Landrein, sp. nov. in honor of the author that described this species. Study and description of fungi associated with threatened tropical species could help to understand their ecology as well as the potential spread of fungi onto cultivated crop species.

First Report of Apple Decline Caused by Botryosphaeria sinensis in Korea

  • Lee, Seung-Yeol;Ten, Leonid N.;Back, Chang-Gi;Jung, Hee-Young
    • 한국균학회지
    • /
    • 제49권3호
    • /
    • pp.417-423
    • /
    • 2021
  • Apple decline symptoms were frequently observed on cv. Fuji apple orchards located in Gyeonggi, Gyeongbuk, and Gangwon provinces during surveys conducted from May until the end of September 2020. Three fungal strains were isolated from the margins of internal lesions of diseased apple trees, and their morphological characteristics were considered similar to Botryosphaeria sinensis. Phylogenetic analysis using internal transcribed spacer (ITS) regions, translation elongation factor 1-alpha (tef1), beta-tubulin (tub2), and the second largest subunit of RNA polymerase II (rpb2) gene sequences confirmed the closest relationship of isolates with B. sinensis at the species level. According to a pathogenicity test, the appearance of dark-brown discolorations and vascular necrosis on apple branches inoculated with the isolated strain KNUF-20-014 was observed. To the best of our knowledge, this is the first report of B. sinensis as the causal agent of apple disease in Korea.

Morphology and Molecular Phylogeny of Pseudocercospora fatouae Associated with Hypophyllous Leaf Mold on Fatoua villosa in Korea

  • Kui-Jae Lee;In-Young Choi;Lamiya Abasova;Joon-Ho Choi;Jung-Hee Park;Hyeon-Dong Shin
    • 한국균학회지
    • /
    • 제51권2호
    • /
    • pp.147-153
    • /
    • 2023
  • Dark brown leaf molds growing in a vein-limited pattern have been continuously observed on the lower leaf surface of Fatoua villosa in Korea. Fifteen samples deposited in the Korea University herbarium were examined for fungal morphological characterization. Two monoconidial isolates were obtained in 2022, and molecular analysis was performed based on a combined multigene dataset of the internal transcribed spacer (ITS) region and partial actin (actA), translation elongation factor 1-alpha (tef1), and DNA-directed RNA polymerase II second-largest subunit (rpb2). Based on morphological features and molecular phylogenetic analysis, the fungus Pseudocercospora fatouae was identified. To the best of our knowledge, it is the first study reporting the presence of P. fatouae on F. villosa in Korea.

Report on a New Truffle Species, Tuber koreanum sp. nov., from Korea

  • Park, Hyeok;Gwon, Ju-Hui;Lee, Jong-Chul;Eom, Ahn-Heum
    • Mycobiology
    • /
    • 제49권6호
    • /
    • pp.527-533
    • /
    • 2021
  • The truffle and ectomycorrhizal roots formed by Tuber sp. were collected from the rhizosphere of Quercus aliena in Korea. The morphological characteristics of the ascoma, and molecular phylogenetic analysis using sequences from the internal transcribed spacer (ITS) and large subunit (LSU) of ribosomal DNA, translation elongation factor 1-alpha (TEF), and RNA polymerase second largest subunit (RPB2) regions confirmed the distinct morphology of the truffle. This truffle belongs to a monophyletic clade among the other Tuber species in the phylogeny. This study describes the truffle, Tuber koreanum, as a new species reported from Korea.

Re-Examination of Several Elsinoë Species Reported from Japan

  • Anysia Hedy Ujat;Tsuyoshi Ono;Yukako Hattori;Chiharu Nakashima
    • Mycobiology
    • /
    • 제51권3호
    • /
    • pp.122-138
    • /
    • 2023
  • Elsinoë are plant pathogenic fungi that cause scabs, spotted anthracnose, and some morphological distortions on various plants, including woody plants, economically important crops, and ornamental plants. Taxonomical reexamination of Elsinoë species in Japan has not yet been conducted based on the modern species criteria. In this study, several Japanese isolates were reexamine based on the morphological and molecular-phylogenetic analysis of the internal transcribed spacer region (ITS), large subunit gene (LSU)m and protein-coding gene such as RNA polymerase II subunit (rpb2) and Translation elongation factor 1-alpha (tef). Japanese isolates were divided into four clades and three new species, Elsinoë hydrangeae, E. sumire, and E. tanashiensis were proposed. One species, Sphaceloma akebiae, was transferred to the genus Elsinoë.

Acrodontium burrowsianum and Pestalotiopsis humicola: Two Previously Unrecorded Fungal Species Isolated from Conifer Leaves in Korea

  • Jae-Wook Choi;Jung-Min Lee;Seok-Yong Park;Ahn-Heum Eom
    • 한국균학회지
    • /
    • 제50권4호
    • /
    • pp.311-318
    • /
    • 2022
  • Endophytic fungal strains were isolated from the leaves of two conifer species (Juniperus rigida and Pinus densiflora) in Korea and identified on the basis of their morphological and molecular characteristics. Internal transcribed spacer and large subunit regions of rDNA were used for the phylogenetic analysis, and the translation elongation factor 1-alpha (TEF) and RNA polymerase II second largest subunit (RPB2) genes were analyzed depending on the species. Two fungal species that were previously unrecorded in Korea were identified: Acrodontium burrowsianum and Pestalotiopsis humicola. Their morphological and phylogenetic characteristics are described herein.

Performance of Fusarium oxysporum EKT01/02 isolate in cyanide biodegradation system

  • Akinpelu, Enoch Akinbiyi;Adetunji, Adewole Tomiwa;Ntwampe, Seteno Karabo Obed;Nchu, Felix;Mekuto, Lukhanyo
    • Environmental Engineering Research
    • /
    • 제23권2호
    • /
    • pp.223-227
    • /
    • 2018
  • This study reports a cyanide resistant and/or tolerant fungus, isolated from the rhizosphere of Zea mays contaminated with cyanide-based pesticides. The isolate was characterised using molecular biology. The effect of free cyanide and heavy metals on the growth of isolate in a synthetic gold mine wastewater was examined. The molecular analyses identified the isolate as Fusarium oxysporum EKT01/02 (KU985430/KU985431). The isolate had a free cyanide degradation efficiency of 77.6%. The results indicated greater growth impairment in culture containing Arsenic (optical density 1.28 and 1.458) and cyanide (optical density 1.315 and 1.385). Higher growth was observed in all cultures supplemented with extracellular polymeric substance. This study showed that the isolate possesses wide substrate utilisation mechanism that could be deployed in environmental engineering applications.