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Construction and Characterization of a cDNA Library from the Camelina sativa L. as an Alternative Oil-Seed Crop (신 바이오디젤 원료 작물인 Camelina의 cDNA library 제작 및 유전자 특성)

  • Park, Won;Jang, Young-Seok;Ahn, Sung-Ju
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.55 no.2
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    • pp.151-158
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    • 2010
  • Camelina sativa L., known as popular names "gold-of-pleasure" or "false flax" is an alternative oilseed crop that can be grown under different climatic and soil conditions. Up to date, however, the genomic information of Camelina has not been studied in detail. Therefore, a cDNA library was constructed and characterized from young leaves. The constructed cDNA library incorporated of 1334 cDNA clones and the size of the insertion fragments average was 736 base pair. We generated a total of 1269 high-quality expressed sequence tags (ESTs) sequences. The result of cluster analysis of EST sequences showed that the number of unigene was 851. According to subsequent analysis, the 476 (55.9%) unigenes were highly homologous to known function genes and the other 375 (44.1%) unigenes were unknown. Remaining 63 (7.4%) unigenes had no homology with any other peptide in NCBI database, indicating that these seemed to be novel genes expressed in leaves of Camelina. The database-matched ESTs were further classified into 17 categories according to their functional annotation. The most abundant of categories were "protein with binding function or cofactor requirement (27%)", "metabolism (11%)", "subcellular localization (11%)", "cellular transport, transport facilities and transport routes (7%)", "energy (6%)", "regulation of metabolism and protein function (6%)". Our result in this study provides an overview of mRNA expression profile and a basal genetic information of Camelina as an oilseed crop.

Effect of Mulching and Soil Conditioners on Yield and Flavonoids Content of Mungbean (녹두 수량과 Flavonoids 함량에 대한 멀칭과 토양개량제 효과)

  • Kim, Dong-Kwan;Chon, Sang-Uk;Lee, Kyung-Dong;Son, Dong-Mo;Rim, Yo-Sup;Kim, Kyong-Ho
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.53 no.4
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    • pp.353-358
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    • 2008
  • The purpose of this study was to examine the effects of black polyethylene film mulching and soil conditioners on the growth, yield, and flavonoids biosynthesis of mungbeans. The seedling stand rate, plant height, and pods per plant were 98%, 61 cm, and 15.1, respectively, when the mungbean grown black polyethylene film mulches. They were greater than these results when the without mulches was applied by 13%, 9 cm, and 1.8, respectively. Mungbean grown with black polyethylene film mulches ($243\;kg{\cdot}10a^{-1}$) exhibited 38% more seed yield than without mulches ($176\;kg{\cdot}10a^{-1}$). However, no significant difference in contents of vitexin and isovitexin of mungbeans between with black polyethylene film mulches and without mulches was observed. Among soil conditioners, standard fertilizer+oil cake and standard fertilizer+mineral powders increased number of pods. The standard fertilizer+oil cake showed the highest seed yield (119%) of mungbean when it mixed with standard fertilizers, and followed by mineral powders (115%). The mixed combinations of oil cake or mineral powders also seem to have affected the biosynthesis of vitexin and isovitexin, whose content in mungbeans was significantly more.

Analysis of the PTO Torque of a Transplanter by Planting Condition

  • Kim, Wan Soo;Chung, Sun Ok;Choi, Chang Hyun;Cho, Jong Seung;Choi, Dug Soon;Kim, Young Joo;Lee, Sang Dae;Hong, Soon Jung;Kim, Yong Joo;Koo, Seung Mo
    • Journal of Biosystems Engineering
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    • v.41 no.4
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    • pp.313-318
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    • 2016
  • Purpose: This study measured and analyzed the PTO (power take off) torque of a transplanter according to the planting conditions during field operation. Methods: A torque measurement system was constructed with torque sensors to measure the torque of a PTO shaft, a measurement device to acquire sensor signals, and a power controller to provide power for a laptop computer. The field operation was conducted at four planting distances (26, 35, 43, and 80 cm) and two planting depths using the transplanter on a field with similar soil conditions. One-way ANOVA with planting distance and Duncan's multiple range test at a significance level of 0.05 were used to analyze the PTO torque. The torque ratio was calculated based on the minimum torque using the average PTO torque measured under each planting condition. Results: The average torques on the PTO shaft for planting distances of 26, 35, 43, and 80 cm at a low planting depth were 11.05, 9.07, 7.04, and 3.75 Nm, respectively; the same for planting distances of 26, 35, 43, and 80 cm at a middle planting depth were 12.20, 9.86, 7.94, and 4.32 Nm, respectively. When the planting distance decreased by 43, 35, and 26 cm, the torque ratio at a low planting depth increased by 88, 142, and 195%, respectively. When the planting distance decreased by 43, 35, and 26 cm, the torque ratio at the middle planting depth increased by 84, 128, and 182%, respectively. Conclusions: PTO torque fluctuated by planting distance and depth. Moreover, the PTO torque increased for short planting distances. Therefore, farmers should determine the planting conditions of the transplanter by considering the load and durability of the machine. The results of this study provide useful information pertaining to the optimum PTO design of the transplanter considering the field load.

Methanol Extract of Alpinia katsumadai Hayata has Anti-viral Activity by Inhibition of α-glucosidase (초두구 추출물의 α-glucosidase 활성 억제에 의한 항바이러스 활성)

  • Lee, Doseung;Boo, Kyung Hwan;Kim, Young Cheon;Lee, Jin-Man;Kim, Seong Cheol;Lee, Wang Shik;Riu, Key Zung;Lee, Dong-Sun
    • Journal of Applied Biological Chemistry
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    • v.57 no.2
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    • pp.179-182
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    • 2014
  • In the present study, we investigated the effects of methanol extracts from Alpinia katsumadai Hayata against antiviral potential underlying mechanism in glucosidase inhibition. Syncytium formation in Newcastle disease virus (NDV)-infected baby hamster kidney (BHK) cell originates from the trafficking of viral glycoprotein into cell-surface. Methanol extracts inhibited not only syncytium formation, but also trafficking of glycoprotein, hemagglutinin-neuraminidase (HN), onto cell-surface. A. katsumadai extracts showed the inhibitory activities ($IC_{50}$ $25{\mu}g/mL$) against ${\alpha}$-glucosidase. These results suggested that blue chanterelle extracts inhibited the cell-surface expression of NDV-HN glycoprotein without significantly affecting HN glycoprotein synthesis in NDV-infected BHK cells.

Investigation of Single Nucleotide Polymorphisms in Porcine Candidate Gene for Growth and Meat Quality Traits in the Berkshire Breed (버크셔 품종의 돼지 성장과 육질관련 후보유전자의 단일염기 다형성에 관한 연구)

  • Kim, Sang-Wook;Jung, Ji-Hye;Do, Kyung-Tag;Kim, Kwan-Suk;Do, Chang-Hee;Park, Jun-Kyu;Joo, Young-Kuk;Kim, Tae-Suk;Choi, Bong-Hwan;Kim, Tae-Hun;Song, Ki-Duk;Cho, Byung-Wook
    • Journal of Life Science
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    • v.17 no.12
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    • pp.1622-1626
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    • 2007
  • This study was conducted to identify useful single nucleotide polymorphisms (SNPs) and determine their association with economically important traits in pig population. Four candidate gene analyses have identified important chromosomal regions and major genes associcated whit economic traits of the pig. For application of the chromosomal information to the pig industry using DNA technology, SNP markers were developed by comparative re-sequencing of polymerase chain reaction (PCR) products of 4 candidate genes (CSF2, IL4, MYOD, RIP140). PCR restriction fragment length polymorphism (PCR-RFLP) assays were developed for these 4 SNPs and used to genotype Berkshire pig populations in Korea.

Breeding of a New Pink Gerbera hybrida 'Party Time' with Strong Peduncle for Cut Flower (단단한 화경의 핑크색 절화용 거베라 신품종 '파티타임' 육성)

  • Chung, Yong Mo;Hwang, Ju Chean;Chin, Young Don;Lee, Jung Soo;Kim, Su Kyeong;Ro, Chi Woong;Yi, Young Byung;Kwon, Oh Chang
    • Horticultural Science & Technology
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    • v.31 no.1
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    • pp.128-132
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    • 2013
  • A new pink gerbera (Gerbera hybrida Hort.) cultivar 'Party Time' was developed from a cross between 'Hope' and 'Sunnyeo', followed by seedling and line selections at the Flower Research Institute of Gyeongnam Agricultural Research and Extension Services (GARES) in 2007. Detailed characteristics of the new cultivar were evaluated from 2005 to 2007. 'Party Time' has semi-double type large flowers in a good harmony with pink (RHS, 65-C) ray floret and brown center. It has a good, stable flower shape and strong peduncles, and its vase life was 12.7 days. The average flower yield of 'Party Time' was about 47.3 stems per plant a year in greenhouse yield trails carried out 2005 to 2007. 'Party Time' (Grant No. 2691) was registered to the Korea Seed and Variety Service (KSVS) for commercialization in 2009.

Use of Microsatellite Markers Derived from Genomic and Expressed Sequence Tag (EST) Data to Identify Commercial Watermelon Cultivars (수박 시판 품종의 식별을 위한 Genomic과 Expressed Sequence Tag (EST)에서 유래된 Microsatellite Marker의 이용)

  • Kwon, Yong-Sham;Hong, Jee-Hwa;Kim, Du-Hyun;Kim, Do-Hoon
    • Horticultural Science & Technology
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    • v.33 no.5
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    • pp.737-750
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    • 2015
  • This study was carried out to construct a DNA profile database for 102 watermelon cultivars through the comparison of polymorphism level and genetic relatedness using genomic microsatellite (gMS) and expressed sequence tag (EST)-microsatellite (eMS) markers. Sixteen gMS and 10 eMS primers showed hyper-variability and were able to represent the genetic variation within 102 watermelon cultivars. With gMS markers, an average of 3.63 alleles per marker were detected with a polymorphism information content (PIC) value of 0.479, whereas with eMS markers, the average number of alleles per marker was 2.50 and the PIC value was 0.425, indicating that eMS detects a lower polymorphism level compared to gMS. Cluster analysis and Jaccard's genetic distance coefficients using the unweighted pair group method with arithmetic average (UPGMA) based on the gMS, eMS, and combined data sets showed that 102 commercial watermelon cultivars could be categorized into 6 to 8 major groups corresponding to phenotypic traits. Moreover, this method was sufficient to identify 78 out of 102 cultivars. Correlation analysis with Mantel tests for those clusters using 3 data sets showed high correlation ($r{\geq}0.80$). Therefore, the microsatellite markers used in this study may serve as a useful tool for germplasm evaluation, genetic purity assessment, and fingerprinting of watermelon cultivars.

A New Spray Chrysanthemum Cultivar, 'Yellow Candy', with Vigorous, Pompon Flower Type and Yellow Petals for Cut Flowers

  • Lim, Jin Hee;Shin, Hak Ki;Park, Sang Kun;Cho, Hae Ryong;Rhee, Hye Kyung;Kim, Mi Seon;Joung, Hyang Young
    • FLOWER RESEARCH JOURNAL
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    • v.19 no.3
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    • pp.181-186
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    • 2011
  • A new spray chrysanthemum cultivar 'Yellow Candy' was released by National Institute of Horticultural & Herbal Science (NIHHS), Rural Development Administration (RDA), in 2008. The cross was made in 2003 between 'Restone' and 'Lollipop'. Trials were conducted from 2006 to 2008 for the evaluation and selection of this cultivar, including shading cultures in summer and retarding cultures in spring. The natural flowering time of 'Yellow Candy' is late October, but year-round flowering is possible by photoperiodic control. It has pompon flower type with yellow petals and yellowish red flower center. The growth of plant is very vigorous. The diameter of flower is 4.3 cm. Number of flowers per stem and petals per flower are 8 and 184, respectively. Days to flowering under the short day treatment is about 58.5 and its vase life is 18.5 days in autumn season. 'Yellow Candy' was applied as No. 2009-177 on Feb. 18, 2009 for variety protection and the plant variety protection rights have been registered as No. 3247 on August 3, 2010 at the Korea Seed and Variety Service.

Application of Information Flow Statistics to Micrometeorological Data to Identify the Ecosystem State (생태계의 상태 파악을 위한 정보 흐름 통계의 미기상학적 자료에의 적용)

  • Kim, Sehee;Yun, Juyeol;Kang, Minseok;Chun, Junghwa;Kim, Joon
    • Proceedings of The Korean Society of Agricultural and Forest Meteorology Conference
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    • 2013.11a
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    • pp.26-27
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    • 2013
  • 산림생태계의 에너지, 물질, 정보의 교환 과정과 그 변화를 이해하려면 먼저 생태계의 구조와 기능이 어떻게 상호작용하는지를 이해해야 한다. 생태계의 기능은 한, 두 가지의 특징에 의해서만 이루어지는 것이 아니다. 그렇기 때문에 그 기능을 파악하고 적절히 이용하거나 대응하기 위해서는 한 생태계와 주변 환경 전체를 바라볼 수 있는 시스템 사고가 필요하다. 이에 우리는 생태계의 '구조'를 파악함으로써 생태계의 '상태'를 이해하고자 한다. 본 연구에서는 Ruddell and Kumar (2009)의 접근법을 따라, 어떻게 한 생태계의 상태를 파악할 수 있는가라는 질문을 광릉활엽수림에 적용하여 답하고자 한다. 즉, 우리는 산림생태계가 열린 복잡계라고 가정하고, 생태계 내에서 다양한 프로세스들 간의 시시각각 변하는 네트워크의 구조가 각 시점의 시스템의 상태를 나타내는 지표가 될 수 있다고 가정하였다. 이 연구에서는 그 구조적 특징을 정량화하여 나타내는데 초점을 맞추었다. 각각의 프로세스를 대표하는 상태 변수들 간의 정보 흐름의 양과 방향, 시간 규모를 계산해냄으로써 네트워크 구조를 파악하고자 하였다. 온대 산악지형 활엽수림인 GDK의 2008년 순생태계교환량(NEE), 총일차생산량(GPP), 생태계호흡량(RE), 현열플럭스(H), 잠열플럭스(LE), 하향단파복사(Rg), 강수량(Precipitation), 기압(Pressure), 기온(T), 포차(VPD)의 시계열 자료를 월별로 나누어 최장 18 시간 규모의 정보 흐름을 계산하였다. 정보 흐름의 구조를 파악하기 위하여 변수들 간의 전이엔트로피(Transfer entropy)와 상호정보(Mutual Information)를 계산하는 방법을 사용하였다. 또한 시계열 자료를 이용함으로써 변수들 간에 정보가 전달되는 시간 규모의 특성을 파악할 수 있었다. 최종적으로, 계산한 정보 흐름을 시각화하여 프로세스 네트워크 구조를 나타내었다. 결과는 월별로 생태계의 정보 흐름의 종류, 방향과 시간 규모, 그에 따른 프로세스 간 상호 작용의 특징 등을 보여준다. 이를 통해 계절적 환경 변화에 따라 시스템의 네트워크 구조와 상태가 어떻게 변화하는지 이해할 수 있을 것이다. 이 연구는 추후 우리 연구실에서 생산한 8 년 자료에 적용함으로써 다양한 날씨 및 기후변화와 환경 변화에 따라 생태계의 구조와 상태가 어떻게 변화하는지 연구하는 시작점이 될 것이다. 이 접근법은 단위나 차원에 무관하게 다양한 종류의 자료에 적용할 수 있는 반면에, 일관성 있게 정의된 시스템의 상태 및 그 상태를 구성하는 주요 하부 시스템들의 네트워크 상태를 이해하는데 이용될 수 있다. 본 연구는 비평형 열역학과 복잡계의 관점에서 바라 본 시스템 사고를 적용하려 하는 여러 연구 분야에 새로운 도전을 촉발할 좋은 선행연구가 될 것이라 기대된다.

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Training Strategics for Future Farmers in Japan (농업인력증대를 위한 영농후계자 육성전략-일본의 사례를 중심으로-)

  • Sim, Jai-Sung
    • The Journal of Natural Sciences
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    • v.11 no.1
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    • pp.119-130
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    • 1999
  • As Japanese economy has been well developed, the manpower problem of farmland has also become one of the largest and the most crucial issues in the overall agricultural policy of the Japanese Government. Particularly, the energetic younger generation and a core of agricultural labor force, has drastically decreased, while the weak older generation has increased. The severity of manpower shortage in agricultural sector led to create a farmer training programs which had been vigorously begun by the Yamagata Prefecture, and a center for promoting local autonomy. The major purpose of education for enhancement of status of future farmers as well as the welfare of core farmhousehold is to provide them with technical of vocational education to give training to those who want to become agricultural technicians, rural leaders of practical farmers Educational program for future and young farmers put emphasis on practical trainings which are directly applied to proper farm management. As a supporting policy for promoting future farmers' activities, Prefecture-level supports were strengthened to develop technical capability, managerial and supervisory ability, and the ability to lead organized activity so that the farm youth may operate modern farms with higher efficiency and greater specialization. Political consideration was also made to develop a rich sense of farm management as well as the adaptability necessary to introduce technical and managerial innovations. Methological measurements on how the Korean government has to do for solving the problem of agricultural manpower facing in farmland in Korea were noted.

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