• 제목/요약/키워드: RS4

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각종 작물에서 분리한 R. solani 균주들의 RAPD를 이용한 종내 그룹의 유전적 유연관계 분석 및 AGs 신속 간이동정 (Analyses of Genetic Relationships of Rhizoctonia solani Isolates from Various Crop Species and Rapid Identification of Anastomosis Groups with RAPD Method)

  • 이윤수;최혜선;김경수;우수진;강원희;김명조;심재욱;이민웅
    • 한국균학회지
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    • 제26권3호통권86호
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    • pp.373-379
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    • 1998
  • Rhizoctonia solani의 종내 그룹의 분류에는 균사융합군과 배양형태가 많이 이용되고 있으며, 이미 20종 이상의 R. solani가 생태학적, 형태학적, 효소학적, hyphal anastomosis 등에 의해 이미 구분되어졌다. Anastomosis group은 R. solani를 분리하는데 유용하지만 R. solani의 생물학적과 병리학적 연구를 위한 유전적 특성과 동정의 직접적인 방법이 요구되어진다. RAPD는 특별한 DNA 절편을 증폭하고 이를 genetic mapping, identification of isolates에 유용하게 적용될 수 있으며, 또한 genetic variation 조사에도 사용될 수 있다. Dendrogram을 작성한 결과 크게 5 group으로 나뉘어졌고, 5개의 group은 AG group의 subgroup과 동일하게 나뉘어졌다. AG group에 구분되지 않은 species들도 RAPD결과 AG tester들과 grouping 되어졌다. RS-1은 AG-5 group에 속하며, RS-4, RS-14, RS-17, RS-16은 AG-2-2(III B)에 속하였다. RS-13은 AG-4에 속하였으며, RS-8과 RS-10은 AG-1(I B)에, RS-7과 RS-21은 AG-2-2(IV)에 속하였다. RS-19는 AG-1-1(I C)에 속하고, RS-3, RS-5, RS-18, RS-6, RS-15는 AG-1에 속하였다. RAPD 결과 AG group의 subgroup간의 차이를 볼 수 있었고, 이에 AG group 되어 있지 않은 species의 AG grouping이 이루어졌다. 또한 subgroup 간의 유전적 차이를 확인 할 수 있는 marker를 개발하거나 subgroup의 특별한 primer를 제작하는 SCAs기법을 이용하여 식물체 병반 또는 토양에서 분리된 R. solani를 간이 동정에 이용할 수 있을 것으로 기대한다.

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저항전분, 통호밀 및 프락토올리고당을 첨가한 식빵의 개발과 Glycemic index 감소 효과 (Glycemic Index Lowering Effects of Breads Supplemented with Resistant Starch, Whole Rye Grain and Fructooligosaccharide)

  • 박민아;이정원;신말식;이선영
    • 대한지역사회영양학회지
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    • 제12권2호
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    • pp.189-197
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    • 2007
  • Low glycemic index (GI) foods have been reported to be very important in the control of blood glucose levels in diseases such as diabetes mellitus and obesity, which are becoming more prevalent in Korea. Bread consumption at breakfast and as a snack is also on the rise. To provide low GI alternatives, breads supplemented with dietary fibers-fructooligosaccharide (FOS), ground whole rye, and 2 types of resistance starch (RS2 and RS4)-were developed. The GIs for these breads were evaluated with 13 healthy college students (M6, F7) and sensory tests were done. Four kinds of breads were made through the modification of a basic recipe for white bread (the control, B) as follows: for Bf, the entire amount of sugar was replaced with FOS. For Ryef, 50% of the white wheat flower was replaced with roughly ground wholerye (20 mesh: 12-20 mesh = 1 : 3) in addition to replacing sugar with FOS. For RS2f and RS4f, 20% of the white wheat flower was replaced with RS2 or RS4, in addition to replacing sugar with FOS. The overall preference score of Bf was similar to that of B, while those of Ryef, RS2f and RS4f were lower than that of B, but showed the acceptable degree of the overall preference. The glycemic indices of Ryef and RS2f were 46.1 and 45.9 respectively, which were significantly lower than the GI of B, 67.8. The GIs of Bf and RS4f were, however, 66.7 and 80.5 respectively, showing no significant difference compared to B. The glycemic loads for a 30 g serving were 9.5, 5.9, 6.2, 11.0 and 9.0 for B, Bf, Ryef, RS2f and RS4f, respectively. In conclusion, addition of RS2 or roughly ground whole rye to the dough formula significantly lowered the GI. Since the preferences shown for those two breads were acceptable, they may be recommended as a substitute for white bread fir persons who need blood glucose management. More studies on the bread making process are required to improve preference and acceptance. Although GI lowering effects for F and RS4 were not found in this study, further studies are needed to verify their effects.

100Gb/s급 광통신시스템을 위한 3-병렬 Reed-Solomon 기반 FEC 구조 설계 (Three-Parallel Reed-Solomon based Forward Error Correction Architecture for 100Gb/s Optical Communications)

  • 최창석;이한호
    • 대한전자공학회논문지SD
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    • 제46권11호
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    • pp.48-55
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    • 2009
  • 본 논문에서는 차세대 100-Gb/s급 광통신 시스템을 위한 3-병렬 Reed-Solomon (RS) 디코더 기반의 고속 Forward Error Correction (FEC) 구조를 제안한다. 제안된 16채널 RS기반 FEC 구조는 4개의 신드롬 계산 블록이 1개의 Key Equation Solver (KES) 블록을 공유하는 3-병렬 4채널 RS 기반 FEC 구조 4개로 구성되어 있다. 제안하는 100-Gb/s RS 기반 FEC는 1.2V의 공급전압의 $0.13{\mu}m$ CMOS 공정을 이용하여 구현하였다. 구현 결과 제안된 RS기반 FEC 구조는 300MHz의 동작 주파수에서 115-Gb/s 의 데이터 처리율을 가지며, 기존의 RS 기반 FEC 구조에 비해 높은 데이터 처리율과 낮은 하드웨어 복잡도를 보여주고 있다.

Induction of Defense Response Against Rhizoctonia solani in Cucumber Plants by Endophytic Bacterium Bacillus thuringiensis GS1

  • Seo, Dong-Jun;Nguyen, Dang-Minh-Chanh;Song, Yong-Su;Jung, Woo-Jin
    • Journal of Microbiology and Biotechnology
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    • 제22권3호
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    • pp.407-415
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    • 2012
  • An endophytic bacterium, Bacillus thuringiensis GS1, was isolated from bracken (Pteridium aquilinum) and found to have maximal production of chitinase (4.3 units/ml) at 5 days after culture. This study investigated the ability of B. thuringiensis GS1 to induce resistance to Rhizoctonia solani KACC 40111 (RS) in cucumber plants. Chitinase activity was greatest in RS-treated plants at 4 days. ${\beta}$-1,3-Glucanase activity was highest in GS1-treated plants at 5 days. Guaiacol peroxidase (GPOD) activity increased continuously in all treated plants for 5 days. Ascorbate peroxidase (APX) activity in RS-treated plants was increased 1.5-fold compared with the control at 4 days. Polyphenol oxidase (PPO) activity in RS-treated plants was increased 1.5-fold compared with the control at 3 days. At 5 days after treatment, activity staining revealed three bands with chitinase activity (Ch1, Ch2, and Ch3) on SDS-PAGE of cucumber plants treated with GS1+RS, whereas only one band was observed for RS-treated plants (Ch2). One GPOD isozyme (Gp1) was also observed in response to treatment with RS and GS1+RS at 4 days. One APX band (Ap2) was present on the native-PAGE gel of the control, and GS1- and GS1+RS-treated plants at 1 day. PPO bands (Po1 and Po2) from RS- and GS1+RS-treated plants were stronger than in the control and GS1-treated plants upon native-PAGE at 5 days. Taken together, these results indicate that the induction of PR proteins and defense-related enzymes by B. thuringiensis GS1 might have suppressed the damping-off caused by R. solani KACC 40111 in cucumber plants.

ALK 유전자 다형성과 뇌출혈과의 상관성 연구 (Association between polymorphism of ALK receptor tyrosine kinase(ALK) gene and risk of intracerebral hemorrhage)

  • 김수강
    • 사물인터넷융복합논문지
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    • 제4권2호
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    • pp.21-28
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    • 2018
  • 본 연구에서는 ALK receptor tyrosine kinase (ALK) 유전자의 단일염기다형성이 뇌출혈의 발병에 관여하는 지를 연구하였다. 156명의 뇌출혈 환자와 425명의 정상인를 모집하였으며 네 개의 단일염기다형성에 대하여 상관성을 살펴보았다. 통계분석에서는 SNPstats, SPSS22.0, Haploview 프로그램을 활용하였다. Odd ratio, 95% 신뢰구간에서는 genotype 모델 및 allele 모델에서 계산하였다. 통계분석결과, rs1881421, rs1881420, rs3795850, rs2246745 의 단일염기다형성이 뇌출혈과 관련하여 유의성을 보였다. (rs1881421, OR=2.02, 95% CI=1.54-2.64, p<0.001; rs1881420, OR=0.53, 95% CI=1.16-2.01, p=0.003; rs3795850, OR=1.54, 95% CI=1.17-2.02, p=0.002; rs2246745, OR=1.95, 95% CI=1.46-2.60, p<0.001 in each allele analysis). CC, GT, and GC haplotypes 빈도 역시 유의성을 보였다. 네 개의 단일염기다형성의 minor allele 가 뇌출혈의 발병을 증가시키는데 기여하였다. 이러한 연구 결과는 ALK 유전자가 뇌출혈의 위험성과 관련 있음을 시사한다.

Replicated Association Study for Metabolic Syndrome of the Gene Cluster in Chromosome 11q23.3

  • Kim, Sung-Soo;Park, Sangjung;Jin, Hyun-Seok
    • 대한의생명과학회지
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    • 제26권4호
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    • pp.368-375
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    • 2020
  • Metabolic syndrome (MetS) is a disease that is accompanied by various metabolic related problems and refers to a disease in which various adult diseases occur along with obesity. These metabolic syndromes appear according to the individual's genetic background. APOA5-ZPR1-BUD13, a gene cluster belonging to chromosome 11q23.3, is well known for its risk of plasma triglycerides and coronary artery disease. Recently, the GWAS results for metabolic syndrome were published in Koreans. The results included the APOA5-ZPR1-BUD13, and the SNPs that first appeared in Koreans in the ZPR1 and BUD13 were also discovered. In this study, the reproducibility was investigated for the newly discovered ZPR1 (rs964184) and BUD13 (rs2075295, rs1558861) using The Health Examinees (HEXA) cohort and showed significance. In addition, BUD13 (rs117548857, rs10488698, rs149527022, rs10790162), ZPR1 (rs2075290, rs145796806, rs201247587), APOA5 (rs12791103, rs1263173, rs7396835, rs17520254) were additionally discovered and significant results were obtained. For the SNPs that showed significant results, the effect on protein expression and the effect of expression quantitative trait loci (eQTL) were also confirmed. This study is expected to contribute to the prevention and treatment of diseases with differences in onset based on individual genetic patterns as well as presenting the effect of genetic mutations in the APOA5-ZPR1-BUD13 on metabolic syndrome and blood lipid levels.

Genetic Variations in XRCC4 (rs1805377) and ATF6 (rs2070150) are not Associated with Hepatocellular Carcinoma in Thai Patients with Hepatitis B Virus Infection

  • Makkoch, Jarika;Praianantathavorn, Kesmanee;Sopipong, Watanyoo;Chuaypen, Natthaya;Tangkijvanich, Pisit;Payungporn, Sunchai
    • Asian Pacific Journal of Cancer Prevention
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    • 제17권2호
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    • pp.591-595
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    • 2016
  • The liver is one of the most common sites of cancer in the world, hepatocellular carcinoma (HCC) predominating. Chronic hepatitis B virus infection (CHB) is considered as an important potential risk factors for HCC. Different people have diverse responses to HBV infection regarding the likelihood of HCC development, and host factors such as single nucleotide polymorphisms (SNPs) might account for this. The present study was conducted to evaluate any association between SNP frequencies in two genes, XRCC4 (rs1805377) and ATF6 (rs2070150), and the risk of CHB and HCC development in Thai patients. The study covered 369 subjects including 121 HCC patients, 141 with chronic hepatitis B virus infection (CHB) and 107 healthy controls. With TaqMan real-time PCR, the results showed that no significant association between XRCC4 (rs1805377) and ATF6 (rs2070150) and risk of HCC in the Thai population. From this first study of the 2 polymorphisms and HCC in Thailand it can concluded that rs1805377 and rs2070150 polymorphisms may not be applicable as genetic markers in the Thai population for HCC assessment.

Seven New Ginsenosides From a New Processed Ginseng

  • Park, Jeong-Hill;Kim, Jong-Moon;Han, Sang-Beom;Kim, Na-Young;Lee, Seung-Ki;Kim, Nak-Doo;Park, Man-Ki;Han, Byung-Hoon
    • 한국응용약물학회:학술대회논문집
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    • 한국응용약물학회 1998년도 Proceedings of UNESCO-internetwork Cooperative Regional Seminar and Workshop on Bioassay Guided Isolation of Bioactive Substances from Natural Products and Microbial Products
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    • pp.175-175
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    • 1998
  • We reported a new processed ginseng with increased biological activities which is named as “sun ginseng (SG)”. Study on the saponin constituents of SG led to the isolation of seven new ginsenosides named as ginsenoside Rk$_1$, Rk$_2$, Rk$_3$, Rs$_4$, Rs$\_$5/, Rs$\_$6/ and Rs$\_$7/. Ginsenoside Rk$_1$, Rk$_2$ and Rk$_3$ were the Δ$\^$20(21),24(25)/-diene dammarane compounds, while ginsenoside Rs$_4$, Rs$\_$5/, Rs$\_$6/ and Rs$\_$7/ were mono-acetylated compounds. Many other ginsenosides which were reported as minor constituents of red ginseng were also isolated, which include 20(S)-Rg$_3$, 20(R)-Rg$_3$, Rg$\_$5/, Rg$\_$6/, F$_4$, Rh$_4$, 20(S)-Rs$_3$ and 20(R)-Rs$_3$. The major ginsenosides of SG were 20(S)-Rg$_3$, 20(R)-Rg$_3$, Rk$_1$ and Rg$\_$5/.

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저전력 무선 센서 네트워크를 위한 RS 코드의 성능 분석 (Performance Analysis of RS codes for Low Power Wireless Sensor Networks)

  • 정경권;최우승
    • 한국컴퓨터정보학회논문지
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    • 제15권4호
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    • pp.83-90
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    • 2010
  • 무선센서네트워크에서는센서노드로부터전송된데이터는채널의노이즈등의요인으로 오류가 일어나기 쉽다. 센서 네트워크는 엄격한 에너지 제안이 있기 때문에 에너지가 효율적인 오류 정정 방법을 사용하는 것이 중요하다. 본 논문에서는 낮은 전송 전력으로 전송한 데이터를 RS 코드를 적용하는 방식을 제안하고, 시뮬레이션과 실험을 수행한다. RS 코드는 데이터에 추가한 리던던시로 동작한다. 인코드 데이터는 저장되거나 전송될 수 있다. 오류가 발생했을 때 인코드된 데이터는 복원된다. 추가된 리던던시는 디코더에서 수신된 데이터에서 오류가 있는 부분을 감지하고 정정하는 데에 사용된다. RS 코드가 정정할 수 있는 오류의 수는 추가되는 리던던시에 의해 결정된다. 실험 결과 저전력 통신에서의 높은 안정성을 확인하였다. 1분마다 32바이트를 전송할 경우 RS(15,13)은 173.7일, RS(31,27)은 169.1일, RS(63,57)은 163.9일, RS(127,115)는 150.7일, RS(255,239)는 149.7일의 수명을 예측할 수 있었다. 패킷 수신 확률(PRR) 실험에 RS(255,239)를 적용하여 약 3m 전송거리가 증가함을 확인하였다.

역병에 대한 Enterobacter asburiae ObRS-5 처리의 유도저항성 발현 (Induction of systemic resistance against Phytophthora blight by Enterobacter asburiae ObRS-5 with enhancing defense-related genes expression)

  • 김다연;전용희;안재형;안시현;윤영건;박인철;박진우
    • 환경생물
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    • 제38권4호
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    • pp.724-732
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    • 2020
  • 본 연구에서는 기 선발한 Enterobacter asburiae ObRS-5 균주를 1×108 cfu mL-1 농도로 고추에 관주 처리했을 때 Phytophthora capsici에 의한 고추역병을 74.6% 방제하는 효과가 있었다. E. asburiae ObRS-5 균주에 의한 고추역병 방제 메커니즘을 확인하기 위해 고추의 PR1, PR4 및 PR10 유전자를 특이적으로 증폭하는 프라이머를 이용하여 quantitative PCR을 수행하였다. 그 결과 E. asburiae ObRS-5 균주를 처리한 고추에서 대조구와 비교하여 상기 세 가지 유전자의 발현이 모두 높은 수준을 유지하였다. 또한 E. asburiae ObRS-5 균주는 고추의 생육을 억제하지 않으면서 ISR 반응을 유도하는 것으로 나타났다. 이러한 결과를 통하여 P. capsici이 침입할 때 E. asburiae ObRS-5 균주가 매개하는 ISR 메커니즘을 통해 Phytophthora 역병의 제어가 가능한 것으로 사료된다.