• The Plant Pathology Journal
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• v.17 no.3
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• pp.184-188
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• 2001

Phytophthora-induced diseases on citrus in Jeju island have been considered of minor importance because of the use as root stock of trifoliate orange, which is immune to Phytophthora. However, brown rot on fruit, which severely occurred in 1998 and 1999, has become a great threat to citrus production in the island. About one-half of the surveyed orchards were infected in 1998 and 4 out of 19 infected fields showed over 20% fruit infection rate. The disease was less severe in 1999, with an estimated infected area and total fruit reduction of 3,155 ha and 15,300 tons, respectively. Typical gummosis was also occasionally observed on cv. Shiranugi, which is mostly cultivated under plastic film houses. Two types of Phytophthora were consistently isolated from various plant parts, identified as P. citrophthora and P. nicotianae. The former was isolated from the aerial parts of the fruit, young leaf, and shoot in the fields. Meanwhile, the latter was only isolated from the basal stem showing gummosis in plastic film houses.

• Proceedings of the Korean Society of Plant Pathology Conference
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• 1999.04a
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• pp.25.1-25
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• 1999

• Research in Plant Disease
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• v.10 no.2
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• pp.100-104
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• 2004

Two species of Phytophthora were isolated from a leaf blight disease found on castor bean plants growing at a residential area of Hwanggeum-dong in Daegu city. One species was producing conspicuously papillate, noncaducous, ovoid to obpyriform sporangia, 31.2-58.5 ${\times}$ 25.4-44.1 ${\mu}{\textrm}{m}$ in range with an average of 46.4 $\pm$ 6.5 ${\times}$ 35.9 $\pm$ 4.7 ${\mu}{\textrm}{m}$ on simple sympodial sporangiophores, was heterothallic with oogonia globose, 22.5-35.0 ${\mu}{\textrm}{m}$ with an average of 30 $\pm$ 3.3 ${\mu}{\textrm}{m}$ in diameter, oospores plerotic, 18.8-30.0 ${\mu}{\textrm}{m}$ in range averaging 25.4 $\pm$ 2.8 ${\mu}{\textrm}{m}$, and with antheridia amphigynous. This species was identified as P. nicotianae Breda de Haan. The other species produced papillate, caducous, ovoid to ellipsoid sporangia with pedicel, 21.5-54.6 ${\times}$ 17.6-34.3 ${\mu}{\textrm}{m}$ in range with an average of 41.7 $\pm$ 7.1 ${\times}$ 28.4 $\pm$ 4.0 ${\mu}{\textrm}{m}$, and was heterothallic with oogonia globose, 21.3-26.8 ${\mu}{\textrm}{m}$ with an average of 23.0 $\pm$ 1.6 ${\mu}{\textrm}{m}$ in diameter, oospores plerotic, 17.5-23.8 ${\mu}{\textrm}{m}$ in range averaging 20.2 $\pm$ 1.8 ${\mu}{\textrm}{m}$, and with antheridia amphigynous. This species was identified as P. palmivora (Butler) Butler. Both species produced chlamydospores. Pathogenicity of the 2 speices was confirmed by foliar inoculation of castor bean seedlings. Both species have been reported to infect castor bean plants in a few foreign countries but it is the first that a disease of castor bean plants caused by either or both of the species was found in Korea.

• Research in Plant Disease
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• v.12 no.3
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• pp.272-277
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• 2006

Recycled irrigation water is a primary inoculum source of Phytophthora spp. and is capable of spreading propagules throughout nursery cultivation. Ozonation is commonly used to disinfest the recycled irrigation water; however, ozone has not been fully researched as a disinfectant for this purpose. In this study, zoospores of four species of Phytophthora were exposed for $1{\sim}9$ min to free available ozone at $0.1{\sim}0.3,\;0.5{\sim}0.7,\;0.9{\sim}1.2,\;1.4{\sim}1.7\;and\;1.9{\sim}2.2mg/l$. Zoospores, mycelial fragments, and culture plugs of P. nicotianae also were exposed to ozone concentrations ranging from 0.1 to 2.2 mg/l for periods ranging from 1 to 9 min. In addition, ozonated water was assayed monthly in 2004 and 2005 at two commercial nurseries, and quarterly in the first year at two other nurseries in Suwon, for ozone and survival of pythiaceous species using a selective medium. No zoospores of any species tested survived endpoint free ozone at 1.4 mg/l while limited mycelial fragments of P. nicotianae survived at 1.9 mg/l, and mycelial plugs treated at the same level of ozone were able to produce few sporangia. Phytophthora spp. were recovered only from nursery irrigation water with levels of free ozone at 0.3 mg/l or lower. The results of this study are essential for improving current ozonation sterilization.

• The Korean Journal of Mycology
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• v.38 no.1
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• pp.40-47
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• 2010

To investigate genetic relationships either interspecies or intraspecies of 14 Korean Phytophthora species, sequence analyses of nuclear DNA (ypt gene and rDNA-IGS region) and mitochondrial DNA (Cox gene, $\beta$-tubuline gene, and EF1A gene) were performed. All of 14 Korean Phytophthora species clearly clustered into foreign isolates of each species. These Korean isolates in Phytophthora species also showed no correlation between molecular classification and morphological classification like as in case of foreigners. P. palmivora KACC 40167 reported previously from genetic groups of Phytophthora species in Korea was not consistent with the classification system, and therefore was required re-examination for the genetic group analysis. Korean isolates of P. drechsleri KACC 40195 showed very close relationship with P. cryptogea KACC 40161 above 94% bootstrap value in P. cryptogea-P. drechsleri complex group. Identification of these isolates is still unclear, because P. cryptogea and P. drechsleri were not differentiated in this study. On the other hand, it was required to unify species for these two species, since P. parasitica and P. nicotianae were clustered into a group on the level of 99 to 100% sequence homology. Comparing to the sequences of foreigners, Korean isolates were newly divided to ten groups in the phylogenic system. These results could be prepared useful informations to understand genetic diversity of Phytophthora species in Korea.

• Journal of Life Science
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• v.25 no.2
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• pp.237-242
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• 2015

The use of calcite-forming bacteria (CFB) in crack remediation and durability improvements in construction materials creates a permanent and environmentally-friendly material. Therefore, research into this type of application is stimulating interdisciplinary studies between microbiology and architectural engineering. However, the mechanisms giving rise to these materials are dependent on calcite precipitation by the metabolism of the CFB, which raises concerns about possible hazards to cement-based construction due to microbial metabolic acid production. The aim of this study was to determine target microorganisms that possibly can have bio-corrosive effects on cement mortar and to assess multi-functional CFBs for their safe application to cement structures. The chalky test was first used to evaluate the $CaCO_3$ solubilization feature of construction sites by fungi, yeast, bacterial strains. Not all bacterial strains are able to solubilize $CaCO_3$, but C. sphaerospermum KNUC253 or P. prolifica KNUC263 showed $CaCO_3$ solubilization activity. Therefore, these two strains were identified as target microorganisms that require control in cement structures. The registered patented strains Bacillus aryabhatti KNUC205, Arthrobacter nicotianae KNUC2100, B. thuringiensis KNUC2103 and Stenotrophomonas maltophilia KNUC2106, reported as multifunctional CFB (fungal growth inhibition, crack remediation, and water permeability reduction of cement surfaces) and isolated from Dokdo or construction site were unable to solubilize $CaCO_3$. Notably, B. aryabhatti KNUC205 and A. nicotianae KNUC2100 could not hydrolyze cellulose or protein, which can be the major constituent macromolecules of internal materials for buildings. These results show that several reported multi-functional CFB can be applied to cement structures or diverse building environments without corrosive or bio-deteriorative risks.

• Journal of the Korean Society of Tobacco Science
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• v.22 no.1
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• pp.7-12
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• 2000

This study was conducted to identify useful germ plasm sources of resistance to black shank, Phytophthora. parasitica, in Nicotiana tabacum and to characterize the interaction between host plant resistance to black shank and pathogen variability. The six internationally represen-tative set of black shank resistant and susceptible tobacco genotypes and four Korean lines were tested for black shank on the field infested with P. parasitica at Chonju Experiment Station, Korea Ginseng & Tobacco Research Institute during the 1992～1997 growing season. Almost 100% of the plants of the most susceptible genotype, Ky 14, did not survive. Complete survival of (MS Ky 14 x L8)F$_1$, which is resistant to reee 0 and ausceptible to reace 1, suggests that Race 0 is the only race of the P. parasitica in this bield. Coker 371 Gold and Beinhart 1000-1 having excellent resistance to black shank could be recommended as the parental cultivars for improving black shank resistance in Korea. Data of the diseased plants showed that KB 101 and KB 110 were medium high resistant and KB 103 and KB 108 being low resistant to black shank.

• Korean Journal Plant Pathology
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• v.14 no.5
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• pp.402-407
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• 1998

Phytophthora rot on jujube fruit has occurred at several cultivation areas in Kyung-buk and Kyung-nam provinces. Symptoms consisted of brownish to reddish rot on fruits resulting in early drop or mummification. The causal fungus isolated from infected fruits and adjacent leaf stalks was identified as Phytophthora citricola, which has never been reported in Korea. Sporangia were semi-papillate, noncaducous and highly variable in shapes. Plerotic oospores with paragynous antheridia were abundant is single cultures. Sporangia of two isolates were measured as 38-76$\times$20-40 ${\mu}{\textrm}{m}$ and averaged 51.4$\times$27.0 and 55.6$\times$36.0 ${\mu}{\textrm}{m}$. Oogonia were ranged from 26 to 36 ${\mu}{\textrm}{m}$ and averaged 31.3 and 32.0 ${\mu}{\textrm}{m}$. Colony pattern was slightly radiated with sparse aerial mycelia on common media. Minium, optimum and maximum temperatures for mycelial growth were recorded at 7, 25, and 32$^{\circ}C$, respectively. Among tested media, 10% V8A was the best and $25^{\circ}C$ was better than 15$^{\circ}C$ for oospore formation of the fungus. The jujube isolates of P. citricola were readily differentiated from other closely related species in the genus, namely; P. nicotianae, P. citrophthora, P. cactorum, P. capsici, and P. plalmivora on the basis of PCR-RFLP of r-DNA. The fungus showed strong pathogenicty to jujube, apple, pear, orange, persimmon and eggplant, and relatively weak to citron, tomato, pepper and cucumber. In this study, P. citrocola is firstly identified and jujube fruit rot caused by the fungus is recorded as a new disease in Korea.

• Research in Plant Disease
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• v.19 no.1
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• pp.12-20
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• 2013

To isolate antagonistic bacteria against sclerotinia rot of lettuce, caused by Sclerotinia sclerotiorum, soil samples were collected from the diseased greenhouse field in Namyangju city, Gyeong-gi province from 2007 to 2008. A total of 196 bacterial isolates were isolated using serial dilution method. In dual culture assay in vitro, 26 isolates showed more than 80% of inhibition rates of mycelial growth of S. sclerotiorum. Based on 16S rDNA sequence analysis, the 26 isolates were identified as Bacillus megaterium, B. cereus, B. subtilis, Arthrobacter nicotianae, A. ramosus, Pseudomonas filiscindens, Stenotrophomonas maltophilia, Brevibacterium frigoritolerans and Sphingobacterium faecium. The 26 isolates inhibited the mycelial growth of S. sclerotiorum up to 80% and the sclerotial germination 0-100%. In the greenhouse pot test of ten isolates conducted in summer, 2 isolates B. megaterium (DK6) and B. cereus (C210) showed control efficacy on sclerotia viability of S. sclerotiorum, 20% and 35%, respectively. In the greenhouse pot test in winter, the disease incidence of the control group was 80%, whereas those of 9 isolates among 26 were approximately 20%. From the result, the 9 isolates are expected as potentially antagonistic bacteria for biological control of sclerotinia rot of lettuce caused by S. sclerotiorum.

• Journal of Microbiology
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• v.41 no.3
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• pp.183-188
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• 2003

We isolated and cultured bacteria that inhabited marine biofilms, and identified them by phylogenetic analysis using 16S rDNA sequences. In the marine environment, biofilms cover most subtidal and intertidal solid surfaces such as rocks, ships, loops, marine animals, and algae. The bacteria in most biofilms are embedded in extracellular polymeric substances that comprise mainly of exopolysaccharides. The exopolysaccharides are excreted from multiple bacterial species; therefore, biofilms are a good source for screening exopolysaccharide-producing bacteria. Thirty-one strains were cultured, and a total of 17 unique strains were identified. Phylogenetic analysis using 16S rDNA sequences indicated that the 17 strains belonged to ${\alpha}$-Proteobacteria (Ochrobactrum anthropi, Paracoccus carotinifaciens); ${\gamma}$-Proteobacteria (Pseudoalteromonas agarovorans, P. piscicida, Pseudomonas aeruginosa, Shewanella baltica, Vibrio parahaemolyticus, V. pomeroyi); CFB group bacteria (Cytophaga latercula, Tenacibaculum mesophilum); high GC, Gram-positive bacteria (Arthrobacter nicotianae, Brevibacterium casei, B. epidermidis, Tsukamurella inchonensis); and low GC, Gram-positive bacteria (Bacillus macroides, Staphylococcus haemolyticus, S. warneri).