• Title/Summary/Keyword: Isolated

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Diversity of Pigment-Producing Halophilic Bacteria Isolated from Coastal Seawater and Solar Saltern in Korea (한국 근해와 염전에서 분리한 색소 생성 호염성 세균의 다양성)

  • Yong Hae-Young;Park Jin-Sook
    • Korean Journal of Microbiology
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    • v.40 no.4
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    • pp.302-306
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    • 2004
  • A total of forty strains of pigment-producing halophilic bacteria were isolated from the solar saltern and coastal seawater in Korea. The diversity of those bacteria were determined on the basis of PCR-RFLP and 16S rDNA sequences. The isolated strains were clssified into nine genera: Pseudoalteromonas, Photobacterium, Vibrio, Halobacillus, Bacillus, Paracoccus, Salinicoccus, Tenacilbaculum, and Flavobacterium. While more than $80\%$ of the pigment-producing halophilic bacteria isolated from the coastal seawater were classified as gram-negative Pseudolateromonas, most of the strains isolated from the solar saltern were classified into gram-positive Halo­bacillus. The other strain was KK7, which may be identified as novel species belonging to the genus, Salini­coccus.

Pounding-involved response of isolated and non-isolated buildings under earthquake excitation

  • Mahmoud, Sayed;Jankowski, Robert
    • Earthquakes and Structures
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    • v.1 no.3
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    • pp.231-252
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    • 2010
  • Previous research on pounding between seismically isolated buildings during earthquakes has been focused on impacts at the bases of structures and the effect of simultaneous interactions at the bases and at the superstructures has not been studied in details. In this paper, the seismic responses of adjacent buildings supported on different or similar base systems considering impacts between bases and superstructures are numerically investigated. The study is carried out in three parts for the two types of adjacent buildings: (i) both structures have fixed bases; (ii) one structure has fixed base and the other is seismically isolated and (iii) both structures have base isolation systems. The results of the study indicate that the pounding-involved responses of the buildings depend mainly on the type of structural base systems and on the structural parameters of both buildings. For the base-isolated building, the variation of the peak accelerations and displacements of the storeys have been found to be relatively low. On the other hand, significant differences have been observed for the fixed base building. The results of the parametric study conducted for different values of the gap size between colliding structures show the reduction in the peak base displacements as the gap distance decreases.

Numerical assessment of seismic safety of liquid storage tanks and performance of base isolation system

  • Goudarzi, Mohammad Ali;Alimohammadi, Saeed
    • Structural Engineering and Mechanics
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    • v.35 no.6
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    • pp.759-772
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    • 2010
  • Seismic isolation is a well-known method to mitigate the earthquake effects on structures by increasing their fundamental natural periods at the expense of larger displacements in the structural system. In this paper, the seismic response of isolated and fixed base vertical, cylindrical, liquid storage tanks is investigated using a Finite Element Model (FEM), taking into account fluid-structure interaction effects. Three vertical, cylindrical tanks with different ratios of height to radius (H/R = 2.6, 1.0 and 0.3) are numerically analyzed and the results of response-history analysis, including base shear, overturning moment and free surface displacement are reported for isolated and non-isolated tanks. Isolated tanks equipped by lead rubber bearings isolators and the bearing are modeled by using a non-linear spring in FEM model. It is observed that the seismic isolation of liquid storage tanks is quite effective and the response of isolated tanks is significantly influenced by the system parameters such as their fundamental frequencies and the aspect ratio of the tanks. However, the base isolation does not significantly affect the surface wave height and even it can causes adverse effects on the free surface sloshing motion.

Anti-ischemic Effect of Polygala Tenuifolia in Isolated Rat Heart

  • Kang, Chang-Won;Kim, Jong-Hoon
    • The Korean Journal of Physiology and Pharmacology
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    • v.11 no.3
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    • pp.89-95
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    • 2007
  • Polygala tenuifolia (PT) is one of the most well-known traditional herbal medicines in Korea which is commonly used for the treatment of cardiovascular symptoms. The anti-ischemic effects of PT in isolated rat heart was investigated by analyzing changes in blood pressure, aortic flow, coronary flow, and cardiac output. And, its underlying mechanism was examined by quantitating intracellular calcium content in rat neonatal cardiomyocytes. Rats were divided into two groups: an ischemia-induced group without any treatment, and an ischemia-induced group treated with PT. Ischemia of isolated heart was induced by stopping the supply of oxygen and buffer for 10 min. The isolated heart was exposed to PT for the first 5 min of 10 min ischemia. PT treatment significantly prevented the decreases of perfusion pressure, aortic flow, coronary flow, and cardiac output under ischemic conditions. In addition, hemodynamics (except heart rate) of the PT-treated group was significantly recovered 60 min after reperfusion compared to the control group (systolic aortic pressure: 83.3% vs. 64.9%, aortic flow volume: 69.5% vs. 48.7%, coronary flow volume: 77.7% vs. 58.4%, and cardiac output: 71.6% vs. 51.2%, p < 0.01). As for the underlying mechanism, PT significantly prevented intracellular calcium increase which was induced by isoproterenol (p < 0.01), suggesting that the anti-ischemic effect of PT is mediated by inhibition of intracellular calcium increase.

Characterization of Chloroanilines-degrading Bacteria Isolated from Seaside Sediment (연안 갯벌에서 분리한 Chloroaniline 화합물 분해 미생물의 특징)

  • Kang, Min-Seung;Kim, Young-Mog
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.40 no.5
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    • pp.282-287
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    • 2007
  • Chloroanilines are aromatic amines used as intermediate products in the synthesis of herbicides, azo-dyes, and pharmaceuticals. 3,4-dichloroaniline (DCA) is the degradation product of some herbicides (diuron, propanil, and linuron) and of trichlorocarbanilide, a chemical used as an active agent in the cosmetic industry. The compound, however, is considered a potential pollutant due to its toxicity and recalcitrant property to humans and other species. With the increasing necessity for bioremediation, we sought to isolate bacteria that degraded 3,4-DCA. A bacterium capable of growth on 3,4-DCA as the sole carbon source was isolated from seaside sediment using a dilution method with a culture enriched in 3,4-DCA. The isolated strain, YM-7 was identified to be Pseudomonas sp. The isolated strain was also able to degrade other chloroaniline compounds. The isolated strain showed a high level of catechol 2,3-dioxygenase activity on exposure to 3,4-DCA, suggesting that this enzyme is an important factor in 3,4-DCA degradation. The activity toward 4-methylcatechol was 53.1% that of catechol, while the activity toward 3-methylcatechol, 4-chlorocatechol and 4,5-chlorocatechol was 18.1, 33.1, and 6.9%, respectively.

Molecular Characterization of Quinolone Antibiotic Resistance in Escherichia coli Isolated from Retail Meat in Seoul (서울시내 시판 식육에서 분리한 대장균의 퀴놀론계 항생제 내성 기전 분석)

  • Park, Ji Min;Choi, Sung Sook
    • YAKHAK HOEJI
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    • v.60 no.1
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    • pp.1-7
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    • 2016
  • The aim of this study was to investigate the prevalence of quinolone resistant E. coli from retail meat and to characterize the resistant determinants. Determination of minimum inhibitory concentration, the sequence analysis of gyrA, gyrB, parC, and parE quinolone resistance determining regions (QRDR), the presences of plasmid mediated quinolone resistance (PMQR) and the expression of efflux pump genes were investigated. Of the total 277 retail meat samples, 67 coli form bacteria were isolated. 15 of 67 isolates showed nalidixic acid resistance and 7 of 15 nalidixic acid resistant isolates were also resistant to ciprofloxacin, moxifloxacin and levofloxacin. 11 of 15 nalidixic acid resistant strains were isolated from chicken, 2 of 15 were isolated from beef and 2 of 15 were isolated from pork samples. 11 of 15 nalidixic acid resistant strains have single mutation at codon 87 (D87N or D87G) in gyrA, 2 of 11 gyrA mutants have double mutations at codon 86 and 87 (L86A and L87I) in parC with mutations at codon 434+445+465 or 429 in gyrB. 2 of 15 resistant isolates harbored qnrS, a PMQR determinant. Over expression of the acrB gene, efflux pump gene (3.93~16.53 fold), was observed in 10 of 15 resistant isolates.

The Antimicrobial Activity of Samhwangsasimtang against pseudomonas aeruginosa 38 isolated from an acne patient (여드름 환자에서 분리된 pseudomonas aeruginosa 38에 대한 삼황사심탕(三黃瀉心湯)의 효과)

  • Kwon, Do-Kyong;Seo, Bu-Il;Park, Ji-Ha;Roh, Seong-Soo;Kim, Seong-Mo;Koo, Jin-Suk;Lee, Eun-Sook
    • The Korea Journal of Herbology
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    • v.25 no.2
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    • pp.11-19
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    • 2010
  • Objective : I want to examine the antimicrobial activity of Samhwangsasimtang against pseudomonas aeruginosa 38 isolated from an acne patient. Method : Antimicrobial activity was assayed through the hot water extract from Samhwangsasimtang against pseudomonas aeruginosa 38 isolated from an acne patient. Result : The size of inhibition zone of Samhwangsasimtang extract was $12.6\;{\pm}\;0.04\;mm$. The optimal pH and temperature for the growth of isolated pseudomonas aeruginosa 38 were 6.0 and $37^{\circ}C$, respectively. The minimum inhibitory concentration of Samhwangsasimtang extract was $10\;{\pm}\;0.06\;{\mu\ell}$ and the antimicrobial activity of Samhwangsasimtang extract was not destroyed by the heat ($121^{\circ}C$ for 15 min) and not affected by pH. Conclusion : Reviewing this experimental result, it appeared that Samhwangsasimtang had efficacy against pseudomonas aeruginosa 38 isolated from an acne patient.

Diversity of Endophytic Fungi Associated with the Roots of Four Aquatic Plants Inhabiting Two Wetlands in Korea

  • You, Young-Hyun;Park, Jong Myong;Park, Jong-Han;Kim, Jong-Guk
    • Mycobiology
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    • v.43 no.3
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    • pp.231-238
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    • 2015
  • A total of 4 aquatic plants, Eleocharis kuroguwai Ohwi, Hydrocharis dubia Backer, Salvinia natans All., and Zizania latifolia Turcz., were sampled from representative two wetlands of South Korea. A total of 38 endophytic fungal strains were isolated from aquatic plants native to the Daepyeong wetland, and 27 strains were isolated from the Jilnal wetland. The internal transcribed spacer regions of fungal isolates were sequenced and a phylogenetic analysis was performed. In addition, endophytic fungal diversity from each wetland and host plant species was deduced. A total of 25 fungal genera were purely isolated, and 16 fungal genera were isolated from each of the two wetlands. Commonly isolated genera from both wetlands were Aspergillus, Cladosporium, Clonostachys, Fusarium, Leptosphaeria, Penicillium, and Talaromyces. This study revealed that fungal diversity varied with environmental conditions and by host plant in representative two wetlands.

A New Report on Phialocephala piceae Isolated from Leaf of Diospyros kaki in Korea (감나무 잎에서 분리한 Phialocephala piceae에 대한 보고)

  • Park, Sangkyu;Lee, Seung-Yeol;Lee, Jae-Jin;Kang, In-Kyu;Lee, Hyang Burm;Jung, Hee-Young
    • The Korean Journal of Mycology
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    • v.44 no.3
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    • pp.188-192
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    • 2016
  • A previously unrecorded fungus was isolated from the persimmon (Diospyros kaki) leaf phyllosphere in Korea. The isolated fungus was characterized by morphological and phylogenetic analyses. The typical morphological characteristics of Phialocephala piceae, including dark brown colonies and short, thick conidiophores, were observed on the isolated fungus. A phylogenetic analysis based on the internal transcribed spacer (ITS) region and RNA polymerase II largest subunit (RPB1) also confirmed the identification of the isolated fungal species as P. piceae. Therefore, this is the first report of P. piceae in Korea.

Neuroprotective Activity of Phytosterols Isolated from Artemisia apiacea (청호의 Phytosterol 성분 분리 및 뇌세포 보호 활성)

  • Lee, Jiwoo;Weon, Jin Bae;Ma, Choong Je
    • Korean Journal of Pharmacognosy
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    • v.45 no.3
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    • pp.214-219
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    • 2014
  • Artemisia apiacea is a traditional herbal medicine using treatment of eczema and jaundice in Eastern Asia including China, Korea, and Japan. In this study, the three phytosterol constituents were isolated and identified from the hexane fraction of 80% aqueous methanol extract of A. apiacea. Compounds were isolated using open column chromatography (silica gel). Their chemical structures were also established using $^1H$-NMR and $^{13}C$-NMR. Moreover, neuroprotective activity of each compound against glutamate-induced neurotoxicity in hippocampal HT-22 cell line was evaluated by 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay. Furthermore, Inhibition of reactive oxygen species (ROS) and calcium ion ($Ca^{2+}$) accumulation were measured for elucidation of neuroprotective mechanism of isolated compounds. They showed that stigmasterol had neuroprotective activity against the glutamate-induced toxicity by inhibition of ROS and $Ca^{2+}$ production. In conclusion, isolated compound of A. apiacea might be useful for therapeutic agent against neurodegenerative diseases.