• Title/Summary/Keyword: Gall

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Development of a SNP marker set related to crown gall disease in grapevines by a genome wide association study

  • Kim, Dae-Gyu;Jang, Hyun A;Lim, Dong Jun;Hur, Youn Young;Lee, Kyo-Sang;Min, Jiyoung;Oh, Sang-Keun
    • Korean Journal of Agricultural Science
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    • v.47 no.3
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    • pp.693-705
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    • 2020
  • Grapes (Vitis spp. L.) are the third most produced fruit in the world. Crown gall disease caused by Agrobacterium vitis forms galls in the stems of the grapevines and reduces the vitality of the fruit trees, resulting in reduced yields. This pathogen has occurred in vineyards worldwide and caused serious economic losses. It is a soil-borne disease, so Agrobacterium vitis can survive for several years in vineyards and is difficult to control. Additionally, since there is no effective chemical control method, the most effective control method is the breeding of resistant varieties. To make the resistant variety, marker-assisted selection (MAS) enables fast breeding with low cost. In this study, we applied a genome-wide association study (GWAS), by combining phenotyping and genotyping-by-sequencing (GBS), for the development of a single nucleotide polymorphism (SNP) marker set related to crown gall disease using 350 grapevine varieties. As a result of the GBS based genotyping analysis, about 58,635 SNPs were obtained. In addition, the phenotypic analysis showed 35.2% resistance, 73% moderate susceptibility and 16.4% highly susceptibility. Moreover, after confirmation, two genes (VvARF4 and VvATL6-like) were shown to be related to crown gall disease based on the results of GWAS analysis, using the phenotypic data, and GBS. High-resolution melting analysis (HRMA) was performed using the Luna® Universal Probe with real-time PCR to distinguish the melting peaks of the resistant and susceptible varieties. Our data show that these SNP markers are expected to be helpful in evaluating resistance against grapevine crown gall disease and in breeding.

Light and electron microscopic observations of Ceratomyxa sparusaurati (Myxosporea: Bivalvulida) from the gall bladder of rock bream (Oplegnathus fasciatus)

  • Cho, Jae Bum;Kim, Ki Hong
    • Journal of fish pathology
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    • v.29 no.1
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    • pp.7-12
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    • 2016
  • In a previous study on the parasites of cultured rock bream (Oplegnathus fasciatus), we reported the discovery of a new species, Ceratomyxa oplegnathus, obtained from the gallbladder. In the present study, we found another Ceratomyxa species, C. sparusaurati, also from the gallbladder of rock bream. The morphological and ultrastructural characteristics of C. sparusaurati were investigated using light and transmission electron microscopy (TEM).

A Study on the Fatty Acids during Metamorphosis of Chestnut Gall Wasp (한국산 밤나무흑벌의 변태에 따른 지방산에 관한 연구)

  • 이경로
    • The Korean Journal of Zoology
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    • v.8 no.2
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    • pp.15-18
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    • 1965
  • Fatty acid components of the Chestnut gall wasp (Dryocosmus kuriphilus YASUMATSU) were analyzed by the method of gas chromatogrphy at various developmental stages. 1. The fatty acids identified at each stage are as follows : Larva stage : acetic acid , benzoic acid and capric acid. Prepupa stage : acetic acid, benzoic acid and capric acid. Pupa stage : acetic acid, benzoic acid and capric acid. 2. Through the development of the wasp, there were large amount of acetic acid.

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Studies of Plant Tumor Induction (Pat 2) On the Study of Peroxidase Activities of Tumor Tissues Developed on Tomato Stem in Outdor Conditions. (식물의 암종유발에 관한 연구 2 (제 2 ) 에서 도마도 줄기에 유발된 의 Peroxidase Activitiy 에 대하여)

  • 이민재;홍순우;최영길
    • Korean Journal of Microbiology
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    • v.4 no.2
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    • pp.5-10
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    • 1966
  • The relationships between tumor score and peroxidase activities of tomato stems infected with Agrobacterium tumefaciens strain A6Kl, B6, T372 11BNV6, 11BV7 and wounded stem as a control were examined in relation to crown gall tumor development on purpose to study the lignification of tumor tissue which is affected to the development of crown gall tumor. As the previous paper has been mentioned the fact that the induction of tumor tissues were inhibited or limited in the lignified stem of host plant. It was presumed that the activities of peroxidase related to the development of lignification were decreased during the period of tumor development. But the experimental result in this experiment shows that the peroxidase activities of crown gall tumor-tissues infected with the A. tumefaciens strains which are already known as virulent are increasing during four weeks, however, in the strain 11BNV6 and wound the peroxidase activities are decreasing on the second week after the inoculation of the bacteria strains. These results could be explained on the basis of that possible regulatory agents of lignification which were accumulated in tumor tissues, IAA, ascorbic acid, glutathion(GSH) and caffeic acid esters, were postulated to act as antioxidants which has been suggested by Stafford. Total nitrogen contents in relation to crown gall tumor development were determined for the detection of protein synthesis related to the enzyme activities which are increasing in the time of plant growth. Generally six groups are contained the largest amount of nitrogen on the second week after the inoculation of the bacterium. Comparing to the tumor score, it is presumed that the all of enzyme activities including peroxidase in tumor tissues are increasing from the second week through the third week after the inoculation of bacterium and the protein synthesis is stimulated under the most appropriated temperature during the above periods.

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Monoterpene Composition in Needles of Pines in relation to the Resistance to Pine Gall Midges (소나무 침엽(針葉)의 Monoterpene 조성(組成)과 솔잎혹파리에 대한 저항성(抵抗性)에 관(關)하여)

  • Kim, J.S.;Park, R.D.;Park, C.K.;Lee, S.K.
    • Applied Biological Chemistry
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    • v.23 no.3
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    • pp.189-197
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    • 1980
  • Effect of monoterpene composition in pine needles on the susceptibility to pine gall midge (Thecodiplosis japonensis Uchida et Inouye) has been pursued. The pines studied include 5 susceptible and 2 resistant species. Also included were severely damaged or unaffected P. densiflora in the pine gall midge affected region. From the needles of the pine trees, 9 monoterpenes were identified by GLC. No correlationship, was found to hold in the monoterpene composition between pine gall midge susceptible and nonsusceptible pine species. Concentrations of limonene, however, gradually increased following oviposition in the unaffected P. densiflora while the concentrations of the monoterpene remained constant in the damaged P. densiflora. Effect of high limonene concentration in the needles of P. densiflora is discussed as a possible factor inducing resistance toward the pest in the unaffected Pinus densiflora.

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Prognostic Relevance of Human Telomerase Reverse Transcriptase (hTERT) Expression in Patients with Gall Bladder Disease and Carcinoma

  • Deblakshmi, Raj Kumari;Deka, Manab;Saikia, Anjan Kumar;Sharma, Bir Kumar;Singh, Nidhi;Das, NN;Bose, Sujoy
    • Asian Pacific Journal of Cancer Prevention
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    • v.16 no.7
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    • pp.2923-2928
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    • 2015
  • Background: Gallbladder carcinoma (GBC) has been stated as an Indian disease, with the highest number of cases being reported from certain districts of northeast India, which has an ethnically distinct population. Unfortunately there are no scientific reports on the underlying molecular mechanisms associated with the pathogenesis of the disease from this region. Aim: The present study evaluated the role of differential expression of human telomerase reverse transcriptase (hTERT) in the development of gall bladder anomalies. Materials and Methods: Blood and tissue samples were collected from patients undergoing routine surgical resection for clinically proven cases of gallbladder disease {cholelithiasis (CL, n=50), cholecystitis (CS, n=40) and GBC (n=30) along with adjacent histopathologically proved non-neoplastic controls (n=15)} with informed consent. Whole blood was also collected from age and sex matched healthy controls (n=25) for comparative analysis. Differential hTERT mRNA expression was evaluated by semi-quantitative rt-PCR and real-time PCR based analysis using ${\beta}$-actin as an internal control. Evaluation of differential hTERT protein expression was studied by Western blot analysis and immunoflourescence. Statistical analysis for differential expression and co-relation was performed by SPSSv13.0 software. Results: Gallbladder anomalies were mostly prevalent in females. The hTERT mRNA and protein expression increased gradiently from normal

Study on Muscular System about Gall Bladder Channel of Foot Soyang Muscle (족소양담경근(足少陽膽經筋)에 대한 근육학적 고찰)

  • Ryu, Hyung-Sun;Kang, Jung-Soo
    • Journal of Acupuncture Research
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    • v.22 no.5
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    • pp.29-36
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    • 2005
  • Objectives : This study is performed to understand the interrelation between 'Foot soyang muscle of the Gall bladder channel' and 'muscular system' on the basis of the link between meridian muscle theory and myofascial pain syndrome. Methods : We have researched some of oriental medical books about meridian muscle theory and western medical books about anatomical muscular system. Results & Conclusion : 1. Myofascial pain syndrome is the medical treatment which finds the start point of the pain in fascia and then treats it on the basis of object and concrete anatomical theory, so its application is needed for objectification of the oriental medicine. 2. There is a wide difference between myofascial pain syndrome and meridian muscle theory in that the former explains each muscle individually, while the latter classifies muscles systematically in the view of organism. 3. Foot soyang muscle contains Dorsal interosseous m, Extensor digitorum longus m, Musculus peroneus brevis, longus and, tertius, lliotibial tract, Vastus lateralis m, Gluteus m, Aximus m, Piriformis m, Tensor fasciae latae m, Gluteus minimus m, Obliquus internus & externus abdominis m, External & Internal intercostal m, Serratus anterior m, Pectoralis major m, Sternocleidomastoid m, Auricularis posterior m, Temporalis m, Masseter m, Orbicularis oculi m etc. on the basis of function and the nature of a disease reflected in muscle. 4. Foot soyang muscle keeps the balance of left md right of the body on the outside, while the Gall bladder keeps the balance of the JangBuKiHyeul(臟腑氣血) on the inside.

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Leaf Gall of Rhododendron indicum Caused by Exobasidium japonicum in Korea (Exobasidium japonicum에 의한 영산홍 떡병)

  • Kwon, Jin-Hyeuk;Chae, Yun-Seok
    • Research in Plant Disease
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    • v.12 no.3
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    • pp.284-286
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    • 2006
  • Leaf gall was occurred on Rhododendron indicum(L.) Sweet[=Azalea indica L.] in a farmer's garden located in Geumsan-myon, and along the walk way of Gangju pond in Jeongchon-myon, Jinju, Korea. The infected leaves was deformed into very conspicuous, pale, fleshy shapeless galls. Basidia were fusiform, $3{\sim}5$ sterigma, and $8{\sim}35{\times}3{\sim}6{\mu}m$ in size. Basidiospores were musiform, straight or curved and $10{\sim}22{\times}3{\sim}5{\mu}m$ in size. The causal organism was identified as Exobasidium japonicum Shirai based on the mycological characteristics of the fungus and pathogenicity. This is the first report on the leaf gall of R. indicum caused by E. japonicum in Korea.

Ultrasonographic Appearance of Liver and Duodenum in Relation to Growth in Native Korean Cattle (한우에서 성장에 따른 간장 및 십이지장의 초음파상)

  • 김명철;변홍섭;신상태;황광남;박명호;이경광;한용만;박경수
    • Journal of Veterinary Clinics
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    • v.14 no.1
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    • pp.11-18
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    • 1997
  • This study was performed to make fundamental data of ultrasonographic diagnosis for liver and duodenum disease in native Korean cattle. Ultrasonographic appearance of liver, caudal vena cava, portal vein, gall bladdr and duodenum according to the growth were determined from 6 to 13 months by monthly examinations in 9 native Korean cattle. The caudal vena cava was determined at 11th intercostal space by use of ultrasonography. The portal vein and gallbladder were determined at 10th intercostal space by use oof ultrasonography. The liver were determined at 12, 11 and 10 th intercostal space by use of ultrasonography. The liver, caudal vena cava, portal cein, gallbladder and duodenum were examinde in standing position. Ultrasonograms were obtainde with 3.5 or 5.0-MHz convex and 5.0-MHz sector transducer. The diameter of vena cava at the 6, 7, 8, 9, 10, 11, 12 and 13 months old age were 18.4, 20.6, 22.4, 25.1, 26.9, 27.3, 28.5 and 29.4 mm, respectively. The diameter of portal vein at the 6, 7, 8, 9, 10, 11, 12 and 13 months old age were 19.5, 20.6, 22.3, 24.5, 26.9, 28.1, 30.7 and 31.5 mm, respectively. The diameter of gall bladder at the 6, 7, 8, 9, 10, 11, 12 and 13 months old age were 63.2, 72.2, 75.1, 78.6, 80.5, 82.3, 84.4 and 91.1 mm, respectively. Cranial part of duodenum was identified near gall bladder by moving of hyperechoic ingesta. Descending duodenum paralleled with vertebrae is seen in the right upper flank and was adjacent to the abdominal wall, and was enveloped in the hyperechoic greater omentum, differentiating it from the jejunum and ileum. The diameter of cranial duodenum at the 6, 7, 8, 9, 10, 11, 12 and 13 months old age were 23.3, 27.9, 29.9, 32.2, 34.4, 34.5, 35.1 and 36.5 mm, respectively. The diameter of descending duodenum revealed smaller diameter than that of cranial duodenum. Calculi in gallbladder were observed by ultrasonography.

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Optimal Storage Condition of Clubroot Pathogen, Plasmodiophora brassicae for Artificial Inoculation (배추뿌리혹병균(Plasmodiophora brassicae)의 인공접종을 위한 효율적인 저장조건)

  • Yang, Seul Gi;Park, Ju Young;Seo, Mun Won;Kim, Hong Gi
    • The Korean Journal of Mycology
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    • v.43 no.4
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    • pp.286-289
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    • 2015
  • Clubroot, caused by the obligate parasite Plasmodiophora brassicae, is a severe soilborne disease of Brassicaceae. Storage of clubroot gall is important for studies on pathogenicity and race identification. As the current storage method has been used for more than 100 years, a new storage method should be developed and the most efficient way maintaining pathogenicity should be determined. Effects of storage conditions with different storage periods on pathogenicity in galls of kimchi cabbage were examined in a greenhouse. The experiments were performed under six conditions and four temperatures in order to determine the most effective storage conditions for maintenance of pathogenicity. The most effective conditions for clubroot gall storage was the storage of whole gall at $-70^{\circ}C$ or storage of filtrate at the same temperature through eight layers of gauze after homogenization of the galls.