• Title/Summary/Keyword: CoRi

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Function and Molecular Ecology Significance of Two Catechol-Degrading Gene Clusters in Pseudomonas putida ND6

  • Shi, Sanyuan;Yang, Liu;Yang, Chen;Li, Shanshan;Zhao, Hong;Ren, Lu;Wang, Xiaokang;Lu, Fuping;Li, Ying;Zhao, Huabing
    • Journal of Microbiology and Biotechnology
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    • v.31 no.2
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    • pp.259-271
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    • 2021
  • Many bacteria metabolize aromatic compounds via catechol as a catabolic intermediate, and possess multiple genes or clusters encoding catechol-cleavage enzymes. The presence of multiple isozyme-encoding genes is a widespread phenomenon that seems to give the carrying strains a selective advantage in the natural environment over those with only a single copy. In the naphthalene-degrading strain Pseudomonas putida ND6, catechol can be converted into intermediates of the tricarboxylic acid cycle via either the ortho- or meta-cleavage pathways. In this study, we demonstrated that the catechol ortho-cleavage pathway genes (catBICIAI and catBIICIIAII) on the chromosome play an important role. The catI and catII operons are co-transcribed, whereas catAI and catAII are under independent transcriptional regulation. We examined the binding of regulatory proteins to promoters. In the presence of cis-cis-muconate, a well-studied inducer of the cat gene cluster, CatRI and CatRII occupy an additional downstream site, designated as the activation binding site. Notably, CatRI binds to both the catI and catII promoters with high affinity, while CatRII binds weakly. This is likely caused by a T to G mutation in the G/T-N11-A motif. Specifically, we found that CatRI and CatRII regulate catBICIAI and catBIICIIAII in a cooperative manner, which provides new insights into naphthalene degradation.

Characteristics of Chemical Compositions and Weathering of Glass Beads excavated from Andong Tumulus in Gildu-ri, Goheung (고흥 길두리 안동고분 출토 유리구슬의 화학조성 및 풍화특성)

  • Han, Min-Su;Lee, Han-Hyoung;Moon, Eun-Jung
    • Journal of Conservation Science
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    • v.27 no.3
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    • pp.323-332
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    • 2011
  • Microtexture and components of 7 glass bead fragments excavated from Andong tumulus in Gildu-ri, Goheung have been analyzed to determine the characteristics of their weathered condition as well as chemical compositions. Firstly, status of microtexture shows that there is a large quantity of pollutants which were presumably transferred from the buried environment into the surface and the gap of the cracks. The examination has displayed that there are less amount of alkali metal components such as sodium (Na) and potasium (K) in the gap of the cracks than on the surface. The chemical compositions analysis has confirmed that two samples belongs to potash glass group ($K_2O-SiO_2$), four to soda glass group ($Na_2O-SiO_2$), and one to the mixed alkali glass group. Chromophoric elements of the glass varies by different colours: blue and navy are cobalt (Co); greenish blue is copper (Cu) and iron (Fe); and light brown is Fe respectively. Such kind of scientific analysis of the excavated glass beads will contribute to the understanding of interchange between various local cultures and arts within the southwest region of Korean Peninsula during the 4th and the 5th centuries.

Effect of Dropwort (Oenanthe javanica) Extracts on Memory Improvement in Alzheimer's Disease Animal Model, Tg2576 mice (알츠하이머질병 모델동물인 Tg2576 마우스를 이용한 미나리 알코올추출물의 기억력 개선 효능)

  • Won, Beom Young;Shin, Ki Young;Ha, Hyun Jee;Chang, Keun-A;Yun, Yeo Sang;Kim, Ye Ri;Park, Yong Jin;Lee, Hyung Gun
    • Korean Journal of Food Science and Technology
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    • v.47 no.6
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    • pp.779-784
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    • 2015
  • This study was conducted to investigate the effect of herbs on memory improvement by focusing on their cholinergic functions in Tg2576 mice. Seven herbs were used to obtain extracts by using alcohol and water. In screening test for cholinergic activities of the extracts, acetylcholinesterase (AChE) activity was highly inhibited in Oenanthe javanica alcohol extract (OJAE, 18.76%) as compared with the others. The OJAE-treated Tg2576 (Tg-OJAE) groups showed the statistically significant increases of latency time in passive avoidance test. Also, it was found that the concentration of $A{\beta}1-42$ was significantly reduced in Tg-OJAE groups compared to non-treated Tg2576 groups. In the additional enzyme test, it was found that $IC_{50}$ of OJAE was $991.77{\mu}g/mL$ and OJAE acted as an uncompetitive inhibitor of AChE. Therefore, it seemed that OJAE can be used for the development of processed foods for memory improvement.

Changes in Nutritional Composition of Dropwort (Oenanthe javanica) Ethanol Extracts (에탄올 농도에 따른 미나리 추출물의 영양성분 변화)

  • Won, Beom Young;Shin, Ki Young;Ha, Hyun Jee;Yun, Yeo Sang;Kim, Ye Ri;Lee, Hyung Gun
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.44 no.6
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    • pp.882-887
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    • 2015
  • This study evaluated the nutritional compositions of dropwort (Oenanthe javanica) extracts depending on the ethanol concentrations. Extractions were performed with hot water, 50% ethanol, 80% ethanol, and 95% ethanol for 4 hours. Changes in yield, as well as total carbohydrate, crude protein, crude fat, total dietary fiber, free sugar, and mineral (Na, Fe, and Ca) contents were investigated. The highest extraction yield of ethanol extracts was 44.67% in 50% ethanol extract of dropwort. Crude protein content reached a maximum of 6.70% while carbohydrate content was highest at 19.6%, in 50% ethanol extract of dropwort. Crude fat content irregularly increased according to ethanol concentration as compared with hot water extract. Total dietary fiber content decreased in ethanol extract, but these changes were not concentration-related. Total sugar contents were highest in hot water and 80% ethanol extracts. Vitamin A content of ethanol extract was higher than that of hot water extract. Mineral (Na, Ca, and Fe) contents were significantly reduced in ethanol extract according to concentration of ethanol, whereas mineral contents were higher in ethanol extract than in hot water extract. Based on this study, ethanol extract of dropwort is more efficient for development of desirable processed foods.

Studies on Ecological Environments and Indoor-rearing Conditions of the Common Grass Yellow Butterfly, Eurema hecabe (남방노랑나비(Eurema hecabe)의 생태환경 및 실내사육 조건에 관한 연구)

  • Lee, Sang-Hyun;Kim, Se-Gwon;Nam, Gyoung-Pil;Son, Jai-Duk;Lee, Jin-Gu;Park, Young-Kyu;Choi, Young-Cheol;Lee, Young-Bo
    • Journal of Sericultural and Entomological Science
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    • v.50 no.2
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    • pp.133-139
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    • 2012
  • The Aims of this study are to investigate ecological environments and indoor-rearing conditions of Eurema hecabe for artificial rearing. Two different nesting site, a open area nearby small river(A area; Daejin-ri, Gonyang-myeon, Sachun-si, Gyoungsangnam-do) and a foot of a hill area(B area; Noryang-ri, Seolcheon-myeon, Namhae-gun, Kyoungsangnam-do), selected for investigation of ecological habitat environment, and investigated two times per month, during six month, from June to November in 2010. In result, the number of butterflies, Eurema hecabe, at the hill area(B area) was 6 times more than the open area(A area). We observed the number of eggs, larvae and puapae in the B area more times compared to those in the A area. In the B area, Lespedeza cuneata was higher preference than the other host plant, Lespedeza pilosa and Albizia julibrissin. For development of indoor-rearing conditions, common grass yellow butterfly, Eurema hecabe, was reared in a room condition. As a result of oviposition preference experiment, 100-mated-female laid significantly higher number of eggs $104.9{\pm}19.6$ on Lespedeza cuneata plant, whereas the number of eggs was $12.7{\pm}4.5$ on Cassia obtusifolia plant. Moreover, the eggs hatched within $5.1{\pm}0.9$ days from the day of oviposition and procent of egg hatchability was 53.7% on host plant. The headwidth of each developmental larval stage were $0.36{\pm}0.02$(1st), $0.61{\pm}0.02$(2nd), $0.93{\pm}0.05$(3rd), $1.46{\pm}0.08$(4th), $2.25{\pm}0.11$(5th). The larval period was $12.1{\pm}0.9$ days under high temperature, long day condition($25^{\circ}C$, 16L : 8D), showing 81.0% pupal ratio. The pupal period was $6.9{\pm}0.7$ days, and the emergence rate was 79.6%. Based on above experiment, artificial rearing system of common grass yellow butterfly, Eurema hecabe was completed in indoor condition.

Flexural performance evaluation of fiber reinforced segments with GFRP plate (GFRP plate를 적용한 섬유보강세그먼트의 휨성능 평가)

  • Oh, Ri-On;Park, Sung-Ki;Sung, Sang-Kyung;Lee, Jae-Young;Kim, Hwang-Hee
    • Journal of Korean Tunnelling and Underground Space Association
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    • v.20 no.5
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    • pp.839-854
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    • 2018
  • This study was performed to evaluate the performance of GFRP plate reinforced segments for TBM tunnel support. Recently, the SFRC segment has been applied to prevent local damage such as reduction of the amount of reinforcing bars of the segment, crack control and breakage. However, the steel fiber used in the SFRC segment has a problem of durability deterioration due to fiber corrosion. Compared with the RC segment, the maximum flexural load reduction of the SFRC segment hinders the broad application range of the TBM tunnel segment. Therefore, GFRP plate was considered as a stiffener for the maximum load increase of SFRC segment, and structural synthetic fiber without corrosive concern was used as a substitute for steel fiber. The flexural performance of the segment was evaluated by using the type of reinforcing fiber and GFRP plate thickness as the main parameters. As a result, the maximum load and the flexural toughness were increased by 21.78~23.03% and 0.5~7.96%, respectively, as compared with the segments reinforced with reinforcing fiber and GFRP plate of 3 mm thickness.

Effect of Smilax china L. Rhizome Extract on Heavy Metal Contents in Rats (청미래 덩굴 뿌리 추출물 투여가 실험동물의 체내 중금속 함량에 미치는 영향)

  • Kang, Hye-Sook;You, Han-Choon;Choi, Yu-Ri;Kim, Hoo-Kyung;Jo, Seon-Mi;Yoon, Byung-Jae
    • The Korean Journal of Food And Nutrition
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    • v.24 no.2
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    • pp.233-238
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    • 2011
  • Smilax china L. rhizome extract(SCE), called 'Tobokreung' in Korean traditional medicine was investigated the influence on heavy metal contents(particularly Pb, Cd, As, and Hg) in Sprague-Dawley rats for 3 weeks. The test groups were divided into 4 group, normal, control, and SCE feeding groups, SC1(13 mg/kg) and SC2(26 mg/kg), respectively. The three group except normal group, were fed heavy metal such as Pb, Cd, As, and Hg. Body weight gain and the weight of target organs (liver and kidney) were determined and had not shown significant differences. Pb, Cd, and As contents in the kidney of SCE feeding groups were tended to decrease after 3 weeks, and SC2 group showed remarkably decrease of them. In the liver, the 3 heavy metal contents except Cd of SC2 group, were decreased rather than that of control group. Pb contents in the serum and the hair of the SC2 group showed significantly decreasing. All the taken together, we investigated the effect of SCE on the 4 heavy metal contents in rats for 3 weeks, and found out that more dosage of SCE made lower heavy metal contents in vivo, for the first time.

Experimental Studies for Analyzing Direct Contamination Pathway $^{54}Mn,\;^{57}Co,\;^{85}Sr,\;^{103}Ru$ and $^{134}Cs$ in Rice (벼에 대한 $^{54}Mn,\;^{57}Co,\;^{85}Sr,\;^{103}Ru,\;^{134}Cs$의 직접오염 경로분석 실험)

  • Choi, Yong-Ho;Lim, Kwang-Muk;Park, Hyo-Guk;Lee, Won-Yun;Lee, Chang-Mi
    • Journal of Radiation Protection and Research
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    • v.25 no.1
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    • pp.21-30
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    • 2000
  • For analyzing the direct contamination pathway of radionudides in rice plants, a Solution containing $^{54}Mn,\;^{57}Co,\;^{85}Sr,\;^{103}Ru$ and $^{134}Cs$ was applied to the aboveground Parts of the between RI application and harvest. Its highest observed value was 0.94. The fractions of the initial plant deposition that remained in rice plants at harvest were in the range of $19{\sim}47%,\;17{\sim}43%,\;19{\sim}42%,\;23{\sim}61%$ and $11{\sim}69%$ for $^{54}Mn,\;^{57}Co,\;^{85}Sr,\;^{103}Ru$ and $^{134}Cs$, respectively, when no decay was assumed. The translocation factors of those radionuclides in hulled seeds were in the range of $6.9{\times}10^{-4}3.8{\times}10^{-2},\;3.6{\times}10^{-3}{\sim}1.6{\times}10^{-1},\;5.8{\times}10^{-4}{\sim}3.2{\sim}10^{-2},\;1.6{\times}10^{-4}{\sim}7.6{\times}10^{-3}$ and $3.2{\times}10^{-2}{\sim}2.0{\times}10^{-1}$, respertively, and were highest when they were applied at the stage of active seed development. It was indicated that the remaining percentage and translocation factor would not be greatly affected by the difference in the rain frequency if it is within a factor of 2. These results can be utilzed for predicting the radionuclide concentrations in rice seeds when an accidental deposition of those radionuclides occurs during the rice-growing season.

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Use of Oil Red O Staining Method in Non-Comedogenic Test for Cosmetics (화장품의 면포 비유발 평가에서 오일 레드 오 염색법의 응용)

  • Lee, Sun Hwa;Lee, Jung Im;Kim, Yoo-Ri;Lee, Bum Chun;Kang, Min Ji;Choi, Kwang Seong;Moon, Tae Kee
    • Journal of the Society of Cosmetic Scientists of Korea
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    • v.39 no.3
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    • pp.215-224
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    • 2013
  • It has been reported that certain ingredients added to cosmetics clog the skin pores and this can cause outbreaks of comedones which are the primary sign of acne leading to inflammatory acne. This research aims to establish objective evaluation criteria for non-comedogenic cosmetics suitable for acne prone skin. The research has been carried out to examine non-comedogenic test performed in foreign clinical institutions and to establish the evaluation method for detecting comedones outbreaks through repetitive closed back-patch test, Also, usability evaluation on face skin is performed additionally to the same subjects. The analysis of the comedones collected through repetitive closed back-patch test confirmed that the test products, moisturizer and sunscreen product, did not cause comedones. These results had no correlation with the analysis result of the comedones collected from face skin or visual evaluation of acne by Global Acne Grading System (GAGS) in face usability test. Additionally, Oil red O staining was performed on the collected comedones specimen for easy distinction of comedones from hair follicle in image analysis. The analysis result of stained specimen showed higher precision than that of non-stained specimen. This study established a new version of non-comedogenic test for cosmetics, whose objectivity and reliability were improved by inclusion of comedones staining step.

Generation of calibration standard gases using capillary gas divider: uncertainty measurement and method validation (다중 모세관을 이용한 교정용 표준가스의 제조: 불확도와 유효성 평가)

  • Lee, Sangyun;Hwang, Eun-Jin;Jung, Hye-Ja;Lee, Kwang-Woo;Chun, Ki-Joon
    • Analytical Science and Technology
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    • v.19 no.5
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    • pp.369-375
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    • 2006
  • Calibration gas mixtures were prepared using dynamic volumetric method according to ISO 6145-5 and the uncertainty was evaluated. Ten identical capillaries with 0.25 mm in inner diameter and 50 cm in length were applied in this system. Dilution ratio of parent gas was determined by the number of capillaries that passes parent gas and that passes balance gas through. Capillaries were made of Teflon which had good chemical stability against adsorption of gaseous substances. Mechanical valves were introduced in this system in order to minimize the thermal effect of solenoid valves. Concentration of prepared gases were compared with master grade standard gases in cylinders made by RiGAS Co. and calibration of the instrument were completed using comparison method according to ISO 6143. Experimental results showed that the coefficient of variance of diluted oxygen standard gases showed less then 0.2% in most dilution range, that of diluted hydrogen sulfide standard gases showed less then 1.0%. Therefore, it is proven that the standard gases prepared by this system are appropriate to be used as a calibration standards in ambient monitoring, etc.