• Title/Summary/Keyword: Cholesky decomposition

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On Computing a Cholesky Decomposition

  • Park, Jong-Tae
    • Communications for Statistical Applications and Methods
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    • v.3 no.2
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    • pp.37-42
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    • 1996
  • Maximum likelihood estimation of Cholesky decomposition is considered under normality assumption. It is shown that maximum liklihood estimation gives a Cholesky decomposition of the sample covariance matrix. The joint distribution of the maximum likelihood estimators is derived. The ussual algorithm for a Cholesky decomposition is shown to be equivalent to a maximumlikelihood estimation of a Cholesky root when the underlying distribution is a multivariate normal one.

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INFLUENCE ANALYSIS OF CHOLESKY DECOMPOSITION

  • Kim, Myung-Geun
    • Journal of applied mathematics & informatics
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    • v.28 no.3_4
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    • pp.913-921
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    • 2010
  • The derivative influence measure is adapted to the Cholesky decomposition of a covariance matrix. Formulas for the derivative influence of observations on the Cholesky root and the inverse Cholesky root of a sample covariance matrix are derived. It is easy to implement this influence diagnostic method for practical use. A numerical example is given for illustration.

A Cholesky Decomposition of the Inverse of Covariance Matrix

  • Park, Jong-Tae;Kang, Chul
    • Journal of the Korean Data and Information Science Society
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    • v.14 no.4
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    • pp.1007-1012
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    • 2003
  • A recursive procedure for finding the Cholesky root of the inverse of sample covariance matrix, leading to a direct solution for the inverse of a positive definite matrix, is developed using the likelihood equation for the maximum likelihood estimation of the Cholesky root under normality assumptions. An example of the Hilbert matrix is considered for an illustration of the procedure.

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Survey of Models for Random Effects Covariance Matrix in Generalized Linear Mixed Model (일반화 선형혼합모형의 임의효과 공분산행렬을 위한 모형들의 조사 및 고찰)

  • Kim, Jiyeong;Lee, Keunbaik
    • The Korean Journal of Applied Statistics
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    • v.28 no.2
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    • pp.211-219
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    • 2015
  • Generalized linear mixed models are used to analyze longitudinal categorical data. Random effects specify the serial dependence of repeated outcomes in these models; however, the estimation of a random effects covariance matrix is challenging because of many parameters in the matrix and the estimated covariance matrix should satisfy positive definiteness. Several approaches to model the random effects covariance matrix are proposed to overcome these restrictions: modified Cholesky decomposition, moving average Cholesky decomposition, and partial autocorrelation approaches. We review several approaches and present potential future work.

Bayesian modeling of random effects precision/covariance matrix in cumulative logit random effects models

  • Kim, Jiyeong;Sohn, Insuk;Lee, Keunbaik
    • Communications for Statistical Applications and Methods
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    • v.24 no.1
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    • pp.81-96
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    • 2017
  • Cumulative logit random effects models are typically used to analyze longitudinal ordinal data. The random effects covariance matrix is used in the models to demonstrate both subject-specific and time variations. The covariance matrix may also be homogeneous; however, the structure of the covariance matrix is assumed to be homoscedastic and restricted because the matrix is high-dimensional and should be positive definite. To satisfy these restrictions two Cholesky decomposition methods were proposed in linear (mixed) models for the random effects precision matrix and the random effects covariance matrix, respectively: modified Cholesky and moving average Cholesky decompositions. In this paper, we use these two methods to model the random effects precision matrix and the random effects covariance matrix in cumulative logit random effects models for longitudinal ordinal data. The methods are illustrated by a lung cancer data set.

Bayesian Modeling of Random Effects Covariance Matrix for Generalized Linear Mixed Models

  • Lee, Keunbaik
    • Communications for Statistical Applications and Methods
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    • v.20 no.3
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    • pp.235-240
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    • 2013
  • Generalized linear mixed models(GLMMs) are frequently used for the analysis of longitudinal categorical data when the subject-specific effects is of interest. In GLMMs, the structure of the random effects covariance matrix is important for the estimation of fixed effects and to explain subject and time variations. The estimation of the matrix is not simple because of the high dimension and the positive definiteness; subsequently, we practically use the simple structure of the covariance matrix such as AR(1). However, this strong assumption can result in biased estimates of the fixed effects. In this paper, we introduce Bayesian modeling approaches for the random effects covariance matrix using a modified Cholesky decomposition. The modified Cholesky decomposition approach has been used to explain a heterogenous random effects covariance matrix and the subsequent estimated covariance matrix will be positive definite. We analyze metabolic syndrome data from a Korean Genomic Epidemiology Study using these methods.

Comparison of the covariance matrix for general linear model (일반 선형 모형에 대한 공분산 행렬의 비교)

  • Nam, Sang Ah;Lee, Keunbaik
    • The Korean Journal of Applied Statistics
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    • v.30 no.1
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    • pp.103-117
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    • 2017
  • In longitudinal data analysis, the serial correlation of repeated outcomes must be taken into account using covariance matrix. Modeling of the covariance matrix is important to estimate the effect of covariates properly. However, It is challenging because there are many parameters in the matrix and the estimated covariance matrix should be positive definite. To overcome the restrictions, several Cholesky decomposition approaches for the covariance matrix were proposed: modified autoregressive (AR), moving average (MA), ARMA Cholesky decompositions. In this paper we review them and compare the performance of the approaches using simulation studies.

Adaptive Beamforming and Detection Algorithms Based on the cholesky Decomposition of the Inverse Covariance Matrix (역 공분산 행렬의 Cholesky 분할에 근거한 적응 빔 형성 및 검출 알고리즘)

  • 박영철;차일환;윤대희
    • The Journal of the Acoustical Society of Korea
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    • v.12 no.2E
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    • pp.47-62
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    • 1993
  • SMI 방법은 수치적인 불안정성과 아울러 많은 계산량을 갖는다. 본 논문에서는 역 공분산 행렬의 Cholesky 분할을 이용하여 SMI 방법보다 효율적인 방법을 제안한다. 제안한 방법에서는 적응 빔 형상과 검출이 하나의 구조로 실현되며 이에 피룡한 역 공분산 행렬의 Cholesky factor는 secondary 입력으로부터 GS 프로세서를 이용하여 추정한다. 제안한 구조의 중요한 특징은 공분산 행렬과 Cholesky factor를 직접 구할 필요가 없다는 점이며, 또한 GS 프로세서의 장점을 이용한 systolic 구조를 사용함으로써 효율적인 계산을 수행할 수 있다. 모의 실험을 통하여 제안한 방법의 성능과 SMI 방법의 성능을 서로 비교하였다. 또한 nonhomogeneous 환경에서 동작하기 위한 방법이 제시되었으며, 아울러 계산량이 많은 GS 구조의 단점을 극복하기 위해 lattice-GS 구조를 이용하는 방법을 제안하였다.

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Incomplete Cholesky Decomposition based Kernel Cross Modal Factor Analysis for Audiovisual Continuous Dimensional Emotion Recognition

  • Li, Xia;Lu, Guanming;Yan, Jingjie;Li, Haibo;Zhang, Zhengyan;Sun, Ning;Xie, Shipeng
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.13 no.2
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    • pp.810-831
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    • 2019
  • Recently, continuous dimensional emotion recognition from audiovisual clues has attracted increasing attention in both theory and in practice. The large amount of data involved in the recognition processing decreases the efficiency of most bimodal information fusion algorithms. A novel algorithm, namely the incomplete Cholesky decomposition based kernel cross factor analysis (ICDKCFA), is presented and employed for continuous dimensional audiovisual emotion recognition, in this paper. After the ICDKCFA feature transformation, two basic fusion strategies, namely feature-level fusion and decision-level fusion, are explored to combine the transformed visual and audio features for emotion recognition. Finally, extensive experiments are conducted to evaluate the ICDKCFA approach on the AVEC 2016 Multimodal Affect Recognition Sub-Challenge dataset. The experimental results show that the ICDKCFA method has a higher speed than the original kernel cross factor analysis with the comparable performance. Moreover, the ICDKCFA method achieves a better performance than other common information fusion methods, such as the Canonical correlation analysis, kernel canonical correlation analysis and cross-modal factor analysis based fusion methods.

An Efficient Adaptive Loop Filter Design for HEVC Encoder (HEVC 부호화기를 위한 효율적인 적응적 루프 필터 설계)

  • Shin, Seung-yong;Park, Seung-yong;Ryoo, Kwang-ki
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2014.10a
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    • pp.295-298
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    • 2014
  • In this paper, an efficient design of HEVC Adaptive Loop Filter(ALF) for filter coefficients estimation is proposed. The ALF performs Cholesky decomposition of $10{\times}10$ matrix iteratively to estimate filter coefficients. The Cholesky decomposition of the ALF consists of root and division operation which is difficult to implement in a hardware design because it needs to many computation rate and processing time due to floating-point unit operation of large values of the Maximum 30bit in a LCU($64{\times}64$). The proposed hardware architecture is implemented by designing a root operation based on Cholesky decomposition by using multiplexer, subtracter and comparator. In addition, The proposed hardware architecture of efficient and low computation rate is implemented by designing a pipeline architecture using characteristic operation steps of Cholesky decomposition. An implemented hardware is designed using Xilinx ISE 14.3 Vertex-6 XC6VCX240T FPGA device and can support a frame rate of 40 4K Ultra HD($4096{\times}2160$) frames per second at maximum operation frequency 150MHz.

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