• 미생물학회지
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• 제41권4호
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• pp.287-292
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• 2005

대청호에서 수화 발생이 빈번한 추소리 수역에서 2005년 3월 15일에 채취한 시료를 대상으로 유전자 분식에 의한 cyanobacteria의 다양성을 조사하였다. rpcBA-Intergenic Spacer (IGS)는 cyanobacteria에 특징적 색소인 phycocyanin을 합성하는 유전자와 유전자 사이의 부분으로, 환경시료에서 cyanobacteria의 다양성을 조사하기에 매우 유용한 기능 유전자이다. cpcBA-IGS를 이용하여 restriction fragment length polymorphism (RELP)으로 cyanobacteria의 다양성을 분석한 결과 Phomidium 속은 58 clones, Anabaena 속은 14 clones, Microcyxtis 속은 4 clones, Spirulina 속은 1 clone 그리고 uncultured cyanobacteria 2 clones가 존재하였다. 전반적으로 Phormidium 속이 우점하였으며, 여름철에 수화를 일으키는 Anabaena 속과 Microcystis 속도 많이 분포하였다. 따라서 cyanobacteria는 cpcBA-IGS와 같은 기능 유전자에 의한 종 동정 및 군집분석이 가능함을 보였다.

• ALGAE
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• 제20권1호
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• pp.43-52
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• 2005

A study on the seasonal changes in the phytoplankton community was carried out in four aquaculture ponds of Bangladesh over a period of 16 months from August 2000 to November 2001. Out of 45 phytoplankton species identified, 30 belong to Cyanophyceae, 7 to Chlorophyceae, 5 to Bacillariophyceae and 3 to Euglenophyceae. The highest phytoplankton abundance was observed in spring followed by early autumn, summer, and the lowest was in winter. The annual succession of Cyanophyceae was characterized by spring and early autumn period dominated by Microcystis sp. Anabaena sp. and Planktolymbya sp. with Microcystis sp. as the main blue-green algae represented. Chlorophyceae was characterized by rainy season domination of Chlorella vulgaris, Pediastrum sp. and Scenedesmus denticulatus with maximum abundance of Chlorella vulgaris. Whereas Bacillariophyceae was dominant during the winter period. Navicula angusta and Cyclotella meneghiniana were the most frequently occurring species of Bacillariophyceae throughout the study period. Euglenophyceae was dominant in late autumn and Euglena sp. was the dominant species. The effect of various physicochemical water quality parameters on the seasonal distribution and succession of the above mentioned phytoplankton population as well as the interaction and eutrophication are discussed.

• 미생물학회지
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• 제38권4호
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• pp.287-292
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• 2002

봄철 cyanobarteria가 우점하는 천호지에서 fluorescent in situ hybridization (FISH) 방법을 이용하여 세균군집구조를 조사하였다. 조사기간동안 총세균수는 0.6～$1.3{\times}10^7 \cells{\cdot}ml^-1$ 의 범위로 매우 높게 나타났다. 또, 총세균수에 대한 eubacterial group이 차지하는 비율의 경우 29.8～45.8%로 작은 분포를 차지하였다. 세균군집구조를 분석한 결과, $\alpha$-group은 1.4～l2.5%, $\beta$-group은 0.9～4.9%, $\gamma$-group은 0.6～8.3%, $\circledcirc$Cytophaga-Flavobacteruim group은 1.0～8.3%를 나타내어 본 연구에서 조사된 각 group이 차지하는 비율은 낮고 상대적으로 unknown eubacteria의 비율이 높았다. 이러한 군집구조는 일반적으로 다른 담수호에서 나타나는 세균의 군집구조와는 다른 군집구조 이며 특히, aggregates에 부착한 세균 군집구조와 비슷한 양상이었다. 또, cyanobacteria의 조성 이 Anabaena속에서 Microcystis속으로 천이가 일어난 시기에 Cytophaga-Flavobacteruim group이 크게 증가하는 것으로 나타나 세균군집의 크기는 식물플랑크톤의 영향을 받는 것으로 확인되었다.

• Journal of Microbiology and Biotechnology
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• 제31권5호
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• pp.645-658
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• 2021

Porins are essential for the viability of Gram-negative bacteria. They ensure the uptake of nutrients, can be involved in the maintenance of outer membrane integrity and define the antibiotic or drug resistance of organisms. The function and structure of porins in proteobacteria is well described, while their function in photoautotrophic cyanobacteria has not been systematically explored. We compared the domain architecture of nine putative porins in the filamentous cyanobacterium Anabaena sp. PCC 7120 and analyzed the seven candidates with predicted OprB-domain. Single recombinant mutants of the seven genes were created and their growth capacity under different conditions was analyzed. Most of the putative porins seem to be involved in the transport of salt and copper, as respective mutants were resistant to elevated concentrations of these substances. In turn, only the mutant of alr2231 was less sensitive to elevated zinc concentrations, while mutants of alr0834, alr4741 and all4499 were resistant to high manganese concentrations. Notably the mutant of alr4550 shows a high sensitivity against harmful compounds, which is indicative for a function related to the maintenance of outer membrane integrity. Moreover, the mutant of all5191 exhibited a phenotype which suggests either a higher nitrate demand or an inefficient nitrogen fixation. The dependency of porin membrane insertion on Omp85 proteins was tested exemplarily for Alr4550, and an enhanced aggregation of Alr4550 was observed in two omp85 mutants. The comparative analysis of porin mutants suggests that the proteins in parts perform distinct functions related to envelope integrity and solute uptake.

• 미생물학회지
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• 제47권1호
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• pp.22-29
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• 2011

Chromophore로 레티날(vitamin A)을 사용하는 막 단백질인 로돕신은 7개의 막 단백질로 이루어진다. 최근 광화학/생물리학 측정 방법이 다양해지면서, 그에 따른 새로운 특성도 함께 다양하게 보고되고 있다. 하지만, 다양한 측정 환경에 따른 그 광화학/생물리학 특성의 차이점에 대한 비교연구는 없는 상태이다. 첫째, 빛 에너지를 이용하여 수소 이온 펌프 역할 하는 것으로 잘 알려져 있는 roteorhodopsin (PR)은 해양 proteobacteria에서 발견 되었다. 둘째, 한 오페론에서 14 kDa 전달자와 같이 발현되면서 신호 전달 기능을 하는 Anabaena sensory rhodopsin (ASR)이 있다. 이에 본 연구에서는 이 두 미생물 로돕신을 이용하여 다양한 조건에서 그 차이를 살펴보았다. 각 단백질이 막에 끼어 있는 상태(membrane state), polyacrylamide gel에 고정되어 있는 상태, nonionic detergent일종인 DDM (n-dodecyl-${\beta}$-D-maltopyranoside)과, OG (octyl-${\beta}$-D-glucopyranoside)에 녹아 있는 상태, 좀더 자연상태와 유사한 환경을 위해 단백질만 깨끗하게 정제한 다음 다시 Escherichia coli의 지질인 DOPC (1,2-didecanoyl-sn-glycero-3-phosphocholine)에 재조립한 상태, 이렇게 5가지 조건에서 각각의 광화학/생물리학 특징을 흡수스펙트럼(absorption spectrum), 빛-어둠 차이 흡수스펙트럼(light-induced difference spectrum), 포토사이클(photocycle)을 측정하였다. 그 결과 DDM에 녹아 있는 PR과 ASR에서 각 다른 파장에서 M과 O state와 같은 선명한 photointermediate를 가지고, 가장 signal/noise 비율이 좋았다. 본 연구를 통해 막단백질의 다양한 측정 환경에 대한 그 특성의 차이점을 살펴봄으로써 앞으로 다양한 종류의 로돕신 연구에 기초 기반이 될 것으로 사료된다.

• 환경생물
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• 제31권4호
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• pp.233-242
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• 2013

Cyanobacteria (blue-green algae) are not only the first oxygenic organisms on earth but also the foremost primary producers in aquatic environment. Massive growth of cyanobacteria, in eutrophic waters, usually changes the water colour to green and is called as algal (cyanobacterial) bloom or green tide. Cyanobacterial blooms are a result of high levels of primary production by certain species such as Microcystis sp., Anabaena sp., Oscillatoria sp., Aphanizomenon sp. and Phormidium sp. These cyanobacterial species can produce hepatotoxins or neurotoxins as well as malodorous compounds like geosmin and 2-methylisoborneol (MIB). In order to solve the nationwide problem of hazardous cyanobacterial blooms in Korea, the following technically and strategically sound approaches need to be developed. 1) As a long-term strategy, reduction of the nutrients such as phosphorus and nitrogen in our water bodies to below permitted levels. 2) As a short term strategy, field application of combination of already established bloom remediation techniques. 3) Development of emerging convergence technologies based on information and communication technology (ICT), environmental technology (ET) and biotechnology (BT). 4) Finally, strengthening education and creating awareness among students, public and industry for effective reduction of pollution discharge. Considering their ecological roles, a complete elimination of cyanobacteria is not desirable. Hence a holistic approach mentioned above in combination to addressing the issue from a social perspective with cooperation from public, government, industry, academic and research institutions is more pragmatic and desirable management strategy.

• 상하수도학회지
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• 제19권4호
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• pp.437-445
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• 2005

Zeta potential is a key parameter of double layer repulsion for individual particles and can usually be used to interpret the trend of coagulation efficiency. This study focused on the measurement of zeta potential of algae and clay under various experimental conditions including water characteristics (pure water, stream water, reservoir water) and coagulant dose (10~50 mg/L). Results showed that the variation of zeta potential was highly sensitive depending on the water characteristics and coagulation conditions. Zeta potential of two genera of algae (anabaena sp. and microcystis sp.) were changed highly with coagulant dosage, especially. On the basis of trajectory analysis, bubble-floc collision efficiency simulated in terms of zeta potential was fitted well with removal efficiency of chlorophyll-a from algae particles. It was found that the control of zeta potential was important for effective removal of algae particles.

• ALGAE
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• 제19권3호
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• pp.227-234
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• 2004

A study on the dynamics of phytoplankton community and the physico-chemical environmental factors was performed biweekly from April 1998 to March 1999 in Youngchun Dam. A total 72 phytoplankton taxa was identified and dominant taxa were blue-green algae and diatoms. The highest value of phytoplankton standing crop (24,826cells·ml$^{-1}$) was observed in September 7, 1998, the blooming period of blue-green algae Phormidium sp., while the lowest (318cells·ml$^{-1}$) was measured in June 18, 1999. The phytoplankton communities were dominated by blue-green algae of Anabaena planktonica, Microcystis aeruginosa and Phormidium sp. during the summer and autumn periods and were dominated by diatoms of Synedra acus and Aulacoseira spp. during the spring and winter periods. Secchi disc transparency, chlorophyll-a, total nitrogen, total phosphorus and silicate concentration were varied in the ranges of 0.4-2.5 m, 2.4-32.2mg·m$^{-1}$, 0.845-2.352mg·l$^{-1}$, 0.005-0.093mg·l$^{-1}$, 0.2-15.7mg·l$^{-1}$, respectively. The trophic status of Youngchun Dam were estimated eutrophic according to Lake Trophic States Index (LTSI).

• Journal of Microbiology and Biotechnology
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• 제23권2호
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• pp.260-266
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• 2013

Rhodococcus sp. strain p52, a previously isolated dibenzofuran degrader, could effectively inhibit the growth of cyanobacteria, including species of Microcystis, Anabaena, and Nodularia. When strain p52 was inoculated at the concentration of $7.7{\times}10^7$ CFU/ml, 93.5% of exponentially growing Microcystis aeruginosa ($7.3{\times}10^6$ cells/ml initially) was inhibited after 4 day. The threshold concentration for its algicidal activity against M. aeruginosa was $7.7{\times}10^6$ CFU/ml. Strain p52 exerted algicidal effect by synthesizing extracellular substances, which were identified as trans-3-indoleacrylic acid, DL-pipecolic acid, and L-pyroglutamic acid. The effective concentrations of trans-3-indoleacrylic acid and DL-pipecolic acid against M. aeruginosa were tested to be 0.5 mg/l and 5 mg/l, respectively.

• Journal of Microbiology and Biotechnology
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• 제29권1호
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• pp.59-65
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• 2019

Fusaricidin analogs, produced by Paenibacillus polymyxa, were tested for selective control of a major bloom-forming cyanobacterium, Microcystis sp. Fusaricidin (A and B mixtures) and four analogs were isolated from P. polymyxa E681 and investigated for their inhibition of cyanobacterial cell growth. Among the four fusaricidin analogs, fraction 915 Da (designated as Fus901) showed growth inhibition activity for Microcystis aeruginosa but not for Anabaena variabilis and Scenedesmus acutus. Microcystin concentration decreased up to 70% and its content per cell also decreased over 50% after 3 days. Fusaricidin exhibited growth inhibition against Gram-positive bacteria but Fus901 did not. Molecular weights of fusaricidin A and B were 883 Da and 897 Da, whereas that of Fus901 was 915 Da. Structure analysis by a ring-opening method revealed a linear form for Fus901. Expression of the pod gene related to oxidative stress was increased 2.1-fold by Fus901 and that of mcyD decreased up to 40%. These results indicate that Fus901 exerts oxidative stress against M. aeruginosa. Thus, Fus901 can be used as a selective cyanobactericide without disturbing the ecological system and could help in decreasing the microcystin concentration.