• Korean Journal of Microbiology
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• v.41 no.4
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• pp.287-292
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• 2005

The cyanobacterial diversity was analyzed by restriction fragment length polymorphism (RFLP) of PCR-amplified rpcBA-Intergenic Spacer (IGS) genes and cpcBA-IGS gene sequencing with a sample collected at Chuso-ri in Daechung Reservoir on March 15, 2005, The Shannon-Weiner diversity index was 0.65, indicating that the cyanobacterial community structure was simple. PCR-RFLP profiles obtained were Phormidium spp. (58 clones), Anabaena spp. (14 clones), Microcystis spp. (4 clones), Spirulina sp. (1 clone) and uncultured cyanobacteria (2 clones). The PCR-RFLP of cpcBA-IGS revealed that Phormidium spp. and Anabaena spp. dominated in the invested sample. As a consequence, it seems that the analysis of functional genes such as cpcBA-IGS can be used for the species identification and community analysis of cyanobacteria.

• ALGAE
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• v.20 no.1
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• pp.43-52
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• 2005

A study on the seasonal changes in the phytoplankton community was carried out in four aquaculture ponds of Bangladesh over a period of 16 months from August 2000 to November 2001. Out of 45 phytoplankton species identified, 30 belong to Cyanophyceae, 7 to Chlorophyceae, 5 to Bacillariophyceae and 3 to Euglenophyceae. The highest phytoplankton abundance was observed in spring followed by early autumn, summer, and the lowest was in winter. The annual succession of Cyanophyceae was characterized by spring and early autumn period dominated by Microcystis sp. Anabaena sp. and Planktolymbya sp. with Microcystis sp. as the main blue-green algae represented. Chlorophyceae was characterized by rainy season domination of Chlorella vulgaris, Pediastrum sp. and Scenedesmus denticulatus with maximum abundance of Chlorella vulgaris. Whereas Bacillariophyceae was dominant during the winter period. Navicula angusta and Cyclotella meneghiniana were the most frequently occurring species of Bacillariophyceae throughout the study period. Euglenophyceae was dominant in late autumn and Euglena sp. was the dominant species. The effect of various physicochemical water quality parameters on the seasonal distribution and succession of the above mentioned phytoplankton population as well as the interaction and eutrophication are discussed.

• Korean Journal of Microbiology
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• v.38 no.4
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• pp.287-292
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• 2002

The composition of bacterial communities was detected in surface water of Cheonho Reservoir dominated by cyanobacteria, using fluorescent in situ hybridization (FISH) method. Total bacterial numbers were very high ranging from 0.6～$1.3{\times}10^7 \cells{\cdot}ml^-1$, whereas the ratio of Eubacteria to total bacteria was 29.8~45.8%, which was lower than that in other freshwater ecosystems. On average only 2.1% of DAPI-stained bacteria were detected by FISH with probes for $\alpha$, $\beta$, and $\gamma$-groups, respectively. Unknown eubacteria which was not bound to any probes except EUB 338, was relatively high. On the other hand, the Cytophaga-Flavobacterium group increased following the change of dominant species from Anabaena sp. to Microcystis sp. This result showed that bacterial communities could be affected by phytoplanktons, especially cyanobacteria.

• Journal of Microbiology and Biotechnology
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• v.31 no.5
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• pp.645-658
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• 2021

Porins are essential for the viability of Gram-negative bacteria. They ensure the uptake of nutrients, can be involved in the maintenance of outer membrane integrity and define the antibiotic or drug resistance of organisms. The function and structure of porins in proteobacteria is well described, while their function in photoautotrophic cyanobacteria has not been systematically explored. We compared the domain architecture of nine putative porins in the filamentous cyanobacterium Anabaena sp. PCC 7120 and analyzed the seven candidates with predicted OprB-domain. Single recombinant mutants of the seven genes were created and their growth capacity under different conditions was analyzed. Most of the putative porins seem to be involved in the transport of salt and copper, as respective mutants were resistant to elevated concentrations of these substances. In turn, only the mutant of alr2231 was less sensitive to elevated zinc concentrations, while mutants of alr0834, alr4741 and all4499 were resistant to high manganese concentrations. Notably the mutant of alr4550 shows a high sensitivity against harmful compounds, which is indicative for a function related to the maintenance of outer membrane integrity. Moreover, the mutant of all5191 exhibited a phenotype which suggests either a higher nitrate demand or an inefficient nitrogen fixation. The dependency of porin membrane insertion on Omp85 proteins was tested exemplarily for Alr4550, and an enhanced aggregation of Alr4550 was observed in two omp85 mutants. The comparative analysis of porin mutants suggests that the proteins in parts perform distinct functions related to envelope integrity and solute uptake.

• Korean Journal of Microbiology
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• v.47 no.1
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• pp.22-29
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• 2011

Rhodopsin is a membrane protein with seven transmembrane region which contains a retinal as its chromophore. Although there have been recently reports on various photo-biochemical features of rhodopsins by a wide range of purifying and measurement methods, there was no actual comparison related to the difference of biochemical characteristics according to their physical environment of rhodopsins. First, proteorhodopsin (PR) was found in marine proteobacteria whose function is known for pumping proton using light energy. Second one is Anabaena sensory rhodopsin (Nostoc sp.) PCC7120 (ASR) which belongs to eubacteria acts as sensory regulator since it is co-expressed with transducer 14 kDa in an operon. In this study, we applied two types of rhodopsins (PR and ASR) to various environmental conditions such as in Escherichia coli membranes, membrane in acrylamide gel, in DDM (n-dodecyl-${\beta}$-D-maltopyranoside), OG (octyl-${\beta}$-D-glucopyranoside), and reconstituted with DOPC (1,2-didecanoyl-sn-glycero-3-phosphocholine). According to the light-induced difference spectroscopy, rhodopsins in 0.02% DDM clearly showed photointermediates like M, and O states which respond to the different wavelengths, respectively and showed the best signal/noise ratio. The laser-induced difference spectra showed the fast formation and decay rate of photointermediates in the DDM solubilized samples than gel encapsulated rhodopsin. Each of rhodopsins seemed to be adapted to its surrounding environment.

• Korean Journal of Environmental Biology
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• v.31 no.4
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• pp.233-242
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• 2013

Cyanobacteria (blue-green algae) are not only the first oxygenic organisms on earth but also the foremost primary producers in aquatic environment. Massive growth of cyanobacteria, in eutrophic waters, usually changes the water colour to green and is called as algal (cyanobacterial) bloom or green tide. Cyanobacterial blooms are a result of high levels of primary production by certain species such as Microcystis sp., Anabaena sp., Oscillatoria sp., Aphanizomenon sp. and Phormidium sp. These cyanobacterial species can produce hepatotoxins or neurotoxins as well as malodorous compounds like geosmin and 2-methylisoborneol (MIB). In order to solve the nationwide problem of hazardous cyanobacterial blooms in Korea, the following technically and strategically sound approaches need to be developed. 1) As a long-term strategy, reduction of the nutrients such as phosphorus and nitrogen in our water bodies to below permitted levels. 2) As a short term strategy, field application of combination of already established bloom remediation techniques. 3) Development of emerging convergence technologies based on information and communication technology (ICT), environmental technology (ET) and biotechnology (BT). 4) Finally, strengthening education and creating awareness among students, public and industry for effective reduction of pollution discharge. Considering their ecological roles, a complete elimination of cyanobacteria is not desirable. Hence a holistic approach mentioned above in combination to addressing the issue from a social perspective with cooperation from public, government, industry, academic and research institutions is more pragmatic and desirable management strategy.

• Journal of Korean Society of Water and Wastewater
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• v.19 no.4
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• pp.437-445
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• 2005

Zeta potential is a key parameter of double layer repulsion for individual particles and can usually be used to interpret the trend of coagulation efficiency. This study focused on the measurement of zeta potential of algae and clay under various experimental conditions including water characteristics (pure water, stream water, reservoir water) and coagulant dose (10~50 mg/L). Results showed that the variation of zeta potential was highly sensitive depending on the water characteristics and coagulation conditions. Zeta potential of two genera of algae (anabaena sp. and microcystis sp.) were changed highly with coagulant dosage, especially. On the basis of trajectory analysis, bubble-floc collision efficiency simulated in terms of zeta potential was fitted well with removal efficiency of chlorophyll-a from algae particles. It was found that the control of zeta potential was important for effective removal of algae particles.

• ALGAE
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• v.19 no.3
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• pp.227-234
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• 2004

A study on the dynamics of phytoplankton community and the physico-chemical environmental factors was performed biweekly from April 1998 to March 1999 in Youngchun Dam. A total 72 phytoplankton taxa was identified and dominant taxa were blue-green algae and diatoms. The highest value of phytoplankton standing crop (24,826cells·ml$^{-1}$) was observed in September 7, 1998, the blooming period of blue-green algae Phormidium sp., while the lowest (318cells·ml$^{-1}$) was measured in June 18, 1999. The phytoplankton communities were dominated by blue-green algae of Anabaena planktonica, Microcystis aeruginosa and Phormidium sp. during the summer and autumn periods and were dominated by diatoms of Synedra acus and Aulacoseira spp. during the spring and winter periods. Secchi disc transparency, chlorophyll-a, total nitrogen, total phosphorus and silicate concentration were varied in the ranges of 0.4-2.5 m, 2.4-32.2mg·m$^{-1}$, 0.845-2.352mg·l$^{-1}$, 0.005-0.093mg·l$^{-1}$, 0.2-15.7mg·l$^{-1}$, respectively. The trophic status of Youngchun Dam were estimated eutrophic according to Lake Trophic States Index (LTSI).

• Journal of Microbiology and Biotechnology
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• v.23 no.2
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• pp.260-266
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• 2013

Rhodococcus sp. strain p52, a previously isolated dibenzofuran degrader, could effectively inhibit the growth of cyanobacteria, including species of Microcystis, Anabaena, and Nodularia. When strain p52 was inoculated at the concentration of $7.7{\times}10^7$ CFU/ml, 93.5% of exponentially growing Microcystis aeruginosa ($7.3{\times}10^6$ cells/ml initially) was inhibited after 4 day. The threshold concentration for its algicidal activity against M. aeruginosa was $7.7{\times}10^6$ CFU/ml. Strain p52 exerted algicidal effect by synthesizing extracellular substances, which were identified as trans-3-indoleacrylic acid, DL-pipecolic acid, and L-pyroglutamic acid. The effective concentrations of trans-3-indoleacrylic acid and DL-pipecolic acid against M. aeruginosa were tested to be 0.5 mg/l and 5 mg/l, respectively.

• Journal of Microbiology and Biotechnology
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• v.29 no.1
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• pp.59-65
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• 2019

Fusaricidin analogs, produced by Paenibacillus polymyxa, were tested for selective control of a major bloom-forming cyanobacterium, Microcystis sp. Fusaricidin (A and B mixtures) and four analogs were isolated from P. polymyxa E681 and investigated for their inhibition of cyanobacterial cell growth. Among the four fusaricidin analogs, fraction 915 Da (designated as Fus901) showed growth inhibition activity for Microcystis aeruginosa but not for Anabaena variabilis and Scenedesmus acutus. Microcystin concentration decreased up to 70% and its content per cell also decreased over 50% after 3 days. Fusaricidin exhibited growth inhibition against Gram-positive bacteria but Fus901 did not. Molecular weights of fusaricidin A and B were 883 Da and 897 Da, whereas that of Fus901 was 915 Da. Structure analysis by a ring-opening method revealed a linear form for Fus901. Expression of the pod gene related to oxidative stress was increased 2.1-fold by Fus901 and that of mcyD decreased up to 40%. These results indicate that Fus901 exerts oxidative stress against M. aeruginosa. Thus, Fus901 can be used as a selective cyanobactericide without disturbing the ecological system and could help in decreasing the microcystin concentration.