• Title/Summary/Keyword: Activation Model

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Effects of Pahs and Pcbs and Their Toxic Metabolites on Inhibition of Gjic and Cell Proliferation in Rat Liver Epithelial Wb-F344 Cells

  • Miroslav, Machala;Jan, Vondracek;Katerina, Chramostova;Lenka, Sindlerova;Pavel, Krcmar;Martina, Pliskova;Katerina, Pencikova;Brad, Upham
    • Environmental Mutagens and Carcinogens
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    • v.23 no.2
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    • pp.56-62
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    • 2003
  • The liver progenitor cells could form a potential target cell population fore both tumor-initiating and -promoting chemicals. Induction of drug-metabolizing and antioxidant enzymes, including AhR-dependent CYP1A1, NQO-1 and AKR1C9, was detected in the rat liver epithelial WB-F344 "stem-like" cells. Additionally, WB-F344 cells express a functional, wild-type form of p53 protein, a biomarker of genotoxic events, and connexin 43, a basic structural unit of gap junctions forming an important type of intercellular communication. In this cellular model, two complementary assays have been established for detection of the modes of action associated with tumor promotion: inhibition of gap junctional intercellular communication (GJIC) and proliferative activity in confluent cells. We found that the PAHs and PCBs, which are AhR agonists, released WB-F344 cells from contact inhibition, increasing both DNA synthesis and cell numbers. Genotoxic effects of some PAHs that lead to apoptosis and cell cycle delay might interfere with the proliferative activity of PAHs. Contrary to that, the nongenotoxic low-molecular-weight PAHs and non-dioxin-like PCB congeners, abundant in the environment, did not significantly affect cell cycle and cell proliferation; however both groups of compounds inhibited GJIC in WB-F344 cells. The release from contact inhibiton by a mechanism that possibly involves the AhR activation, inhibition of GJIC and genotoxic events induced by environmental contaminants are three important modes of action that could play an important role in carcinogenic effects of toxic compounds. The relative potencies to inhibit GJIC, to induce AhR-mediated activity, and to release cells from contact inhibition were determined for a large series of PAHs and PCBs and their metabolites. In vitro bioassays based on detection of events on cellular level (deregulation of GJIC and/or proliferation) or determination of receptor-mediated activities in both ?$stem-like^{\circ}{\times}$ and hepatocyte-like liver cellular models are valuable tools for detection of modes of action of polyaromatic hydrocarbons. They may serve, together with concentration data, as a first step in their risk assessment.

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A Neuroprotective Action of Quercetin and Apigenin through Inhibiting Aggregation of Aβ and Activation of TRKB Signaling in a Cellular Experiment

  • Ya-Jen Chiu;Yu-Shan Teng;Chiung-Mei Chen;Ying-Chieh Sun;Hsiu Mei Hsieh-Li;Kuo-Hsuan Chang;Guey-Jen Lee-Chen
    • Biomolecules & Therapeutics
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    • v.31 no.3
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    • pp.285-297
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    • 2023
  • Alzheimer's disease (AD) is a neurodegenerative disease with progressive memory loss and the cognitive decline. AD is mainly caused by abnormal accumulation of misfolded amyloid β (Aβ), which leads to neurodegeneration via a number of possible mechanisms such as down-regulation of brain-derived neurotrophic factor-tropomyosin-related kinase B (BDNF-TRKB) signaling pathway. 7,8-Dihydroxyflavone (7,8-DHF), a TRKB agonist, has demonstrated potential to enhance BDNF-TRKB pathway in various neurodegenerative diseases. To expand the capacity of flavones as TRKB agonists, two natural flavones quercetin and apigenin, were evaluated. With tryptophan fluorescence quenching assay, we illustrated the direct interaction between quercetin/apigenin and TRKB extracellular domain. Employing Aβ folding reporter SH-SY5Y cells, we showed that quercetin and apigenin reduced Aβ-aggregation, oxidative stress, caspase-1 and acetylcholinesterase activities, as well as improved the neurite outgrowth. Treatments with quercetin and apigenin increased TRKB Tyr516 and Tyr817 and downstream cAMP-response-element binding protein (CREB) Ser133 to activate transcription of BDNF and BCL2 apoptosis regulator (BCL2), as well as reduced the expression of pro-apoptotic BCL2 associated X protein (BAX). Knockdown of TRKB counteracted the improvement of neurite outgrowth by quercetin and apigenin. Our results demonstrate that quercetin and apigenin are to work likely as a direct agonist on TRKB for their neuroprotective action, strengthening the therapeutic potential of quercetin and apigenin in treating AD.

Effects of topical application of Phospholipid derivatives on the secretion of sebum on the skin of the fuzzy rats

  • Y. A. Hwang;Park, W. K.;Park, C. Y.;Kim, J. W.;Park, C. S.
    • Proceedings of the SCSK Conference
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    • 2003.09a
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    • pp.578-589
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    • 2003
  • The fuzzy rat that expresses hypersecretion of sebum and hyperplastic sebaceous glands is a genetic mutant for the study of many pharmacological aspects especially human acne. Through this model, we examined the effects of several phospholipids on the secretion of sebum after topical application. The phospholipid derivatives were phosphatidylcholine (PC), hydrogenated phosphatidylcholine (HPC), phosphati dylserine (PS) and hydrogenated phosphatidylserine(HPS). All agents were dissolved into the vehicle (1, 3-Butanediol, ethanol and water) at 0.5% weight volume and applied on the dorsal area of the fuzzy rat. To observe histological changes, the skin biopsies were stained with Oil Red O and the size and morphology of sebaceous gland was observed under microscope. Topical treatment with PC and/or HPC showed a marked decrease in sebum excretion. Especially hydrogenated PC (HPC) appeared to have more predominant sebosuppressive function than any other treatment. The other agents such as PS and HPS showed a marginal effect on sebum secretion. With the sebosuppressive activity, HPC and PC seem to have a good potential application on acne treatment. In order to obtain more insights into possible mechanisms behind the above observations, effects of each phospholipid on the expression of peroxisome proliferator-activated receptor (PPAR) genes were investigated. Recently, it has been demonstrated that expression and activation of PPAR subtypes appear to modulate the accumulation of cytoplasmic fat droplets that characterizes the sebocyte differentiation(1). It was also previously suggested that PPAR${\gamma}$ antagonist would seem possible to interfere sebum production without side effects (2). In this study we examined the diverse effects of the tested phospholipids on the expression of several PPAR genes based on reverse transcription-polymerase chain reaction (RT-PCR) from the topically treated skin of fuzzy rats. The results and possible implications are discussed.

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Ginsenoside compound K reduces ischemia/reperfusion-induced neuronal apoptosis by inhibiting PTP1B-mediated IRS1 tyrosine dephosphorylation

  • Jing, Fu;Liang, Yu;Qian, Yu;Nengwei, Yu;Fei, Xu;Suping, Li
    • Journal of Ginseng Research
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    • v.47 no.2
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    • pp.274-282
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    • 2023
  • Background: Ginsenoside compound K (CK) stimulated activation of the PI3K-Akt signaling is one of the major mechanisms in promoting cell survival after stroke. However, the underlying mediators remain poorly understood. This study aimed to explore the docking protein of ginsenoside CK mediating the neuroprotective effects. Materials and methods: Molecular docking, surface plasmon resonance, and cellular thermal shift assay were performed to explore ginsenoside CK interacting proteins. Neuroscreen-1 cells and middle cerebral artery occlusion (MCAO) model in rats were utilized as in-vitro and in-vivo models. Results: Ginsenoside CK interacted with recombinant human PTP1B protein and impaired its tyrosine phosphatase activity. Pathway and process enrichment analysis confirmed the involvement of PTP1B and its interacting proteins in PI3K-Akt signaling pathway. PTP1B overexpression reduced the tyrosine phosphorylation of insulin receptor substrate 1 (IRS1) after oxygen-glucose deprivation/reoxygenation (OGD/R) in neuroscreen-1 cells. These regulations were confirmed in the ipsilateral ischemic hemisphere of the rat brains after MCAO/R. Ginsenoside CK treatment reversed these alterations and attenuated neuronal apoptosis. Conclusion: Ginsenoside CK binds to PTP1B with a high affinity and inhibits PTP1B-mediated IRS1 tyrosine dephosphorylation. This novel mechanism helps explain the role of ginsenoside CK in activating the neuronal protective PI3K-Akt signaling pathway after ischemia-reperfusion injury.

A study on activation functions of Artificial Neural Network model suitable for prediction of the groundwater level in the mid-mountainous area of eastern Jeju island (제주도 동부 중산간지역 지하수위 예측에 적합한 인공신경망 모델의 활성화함수 연구)

  • Mun-Ju Shin;Jeong-Hun Kim;Su-Yeon Kang;Jeong-Han Lee;Kyung Goo Kang
    • Proceedings of the Korea Water Resources Association Conference
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    • 2023.05a
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    • pp.520-520
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    • 2023
  • 제주도 동부 중산간 지역은 화산암으로 구성된 지하지질로 인해 지하수위의 변동폭이 크고 변동양상이 복잡하여 인공신경망(Artificial Neural Network, ANN) 모델 등을 활용한 지하수위의 예측이 어렵다. ANN에 적용되는 활성화함수에 따라 지하수의 예측성능은 달라질 수 있으므로 활성화함수의 비교분석 후 적절한 활성화함수의 사용이 반드시 필요하다. 본 연구에서는 5개 활성화함수(sigmoid, hyperbolic tangent(tanh), Rectified Linear Unit(ReLU), Leaky Rectified Linear Unit(Leaky ReLU), Exponential Linear Unit(ELU))를 제주도 동부 중산간지역에 위치한 2개 지하수 관정에 대해 비교분석하여 최적 활성화함수 도출을 목표로 한다. 또한 최적 활성화함수를 활용한 ANN의 적용성을 평가하기 위해 최근 널리 사용되고 있는 순환신경망 모델인 Long Short-Term Memory(LSTM) 모델과 비교분석 하였다. 그 결과, 2개 관정 중 지하수위 변동폭이 상대적으로 큰 관정은 ELU 함수, 상대적으로 작은 관정은 Leaky ReLU 함수가 지하수위 예측에 적절하였다. 예측성능이 가장 낮은 활성화함수는 sigmoid 함수로 나타나 첨두 및 최저 지하수위 예측 시 사용을 지양해야 할 것으로 판단된다. 도출된 최적 활성화함수를 사용한 ANN-ELU 모델 및 ANN-Leaky ReLU 모델을 LSTM 모델과 비교분석한 결과 대등한 지하수위 예측성능을 나타내었다. 이것은 feed-forward 방식인 ANN 모델을 사용하더라도 적절한 활성화함수를 사용하면 최신 순환신경망과 대등한 결과를 도출하여 활용 가능성이 충분히 있다는 것을 의미한다. 마지막으로 LSTM 모델은 가장 적절한 예측성능을 나타내어 다양한 인공지능 모델의 예측성능 비교를 위한 기준이 되는 참고모델로 활용 가능하다. 본 연구에서 제시한 방법은 지하수위 예측과 더불어 하천수위 예측 등 다양한 시계열예측 및 분석연구에 유용하게 사용될 수 있다.

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Performance Evaluation of ResNet-based Pneumonia Detection Model with the Small Number of Layers Using Chest X-ray Images (흉부 X선 영상을 이용한 작은 층수 ResNet 기반 폐렴 진단 모델의 성능 평가)

  • Youngeun Choi;Seungwan Lee
    • Journal of radiological science and technology
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    • v.46 no.4
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    • pp.277-285
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    • 2023
  • In this study, pneumonia identification networks with the small number of layers were constructed by using chest X-ray images. The networks had similar trainable-parameters, and the performance of the trained models was quantitatively evaluated with the modification of the network architectures. A total of 6 networks were constructed: convolutional neural network (CNN), VGGNet, GoogleNet, residual network with identity blocks, ResNet with bottleneck blocks and ResNet with identity and bottleneck blocks. Trainable parameters for the 6 networks were set in a range of 273,921-294,817 by adjusting the output channels of convolution layers. The network training was implemented with binary cross entropy (BCE) loss function, sigmoid activation function, adaptive moment estimation (Adam) optimizer and 100 epochs. The performance of the trained models was evaluated in terms of training time, accuracy, precision, recall, specificity and F1-score. The results showed that the trained models with the small number of layers precisely detect pneumonia from chest X-ray images. In particular, the overall quantitative performance of the trained models based on the ResNets was above 0.9, and the performance levels were similar or superior to those based on the CNN, VGGNet and GoogleNet. Also, the residual blocks affected the performance of the trained models based on the ResNets. Therefore, in this study, we demonstrated that the object detection networks with the small number of layers are suitable for detecting pneumonia using chest X-ray images. And, the trained models based on the ResNets can be optimized by applying appropriate residual-blocks.

Study of the Effect and Underlying Mechanism of Clove Extract on Monosodium Iodoacetate-Induced Osteoarthritis in Rats (정향(丁香) 추출물이 골관절염 흰쥐에 미치는 효과 및 기전 연구)

  • Jin A Lee;Min Ju Kim;Seong-Wook Seo;Mi-Rae Shin
    • The Journal of Internal Korean Medicine
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    • v.43 no.6
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    • pp.1089-1104
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    • 2022
  • Objective: The aim of this study was to identify the efficacy and underlying mechanism of cloves as an osteoarthritis (OA) treatment in a monosodium iodoacetate (MIA)-induced rat OA model. Osteoarthritis (OA) is nowadays one of the most prevalent degenerative joint diseases. Methods: Sprague-Dawley rats treated with MIA (50 μL; 80 mg/mL) were used as in vivo OA models. Cloves (100 and 200 mg/kg b.w.) were administered orally once daily for 2 weeks from 7 days after MIA injection. Changes in hindpaw weight distribution (HWD) were measured as a joint discomfort index. Activation markers related to inflammatory responses and cartilage degeneration in the right knee joints were evaluated by serum analysis and western blotting. Results: HWD decreased in the MIA control group but showed a dose-dependent elevation after clove treatment. Clove treatment inhibited inflammatory factors by PI3K/Akt/NF-κB signaling pathways, while also activating antioxidant factors through Sirt1/AMPK signaling pathways. Clove treatment also suppressed matrix metalloproteinase (MMP) overexpression and significantly increased the levels of tissue inhibitors of metalloproteinases (TIMPs). Conclusions: Treatment with cloves effectively reversed MIA-induced effects. Therefore, clove treatment could have the potential to protect against or treat OA.

FBR CFD Simulation of Steam Methanol Reforming Reaction using Intrinsic Kinetic Data of Copper-impregnated Hydrotalcite Catalyst (구리가 함침된 하이드로탈사이트 촉매의 고유 키네틱 데이터를 이용한 메탄올 수증기 개질반응의 고정층 반응기 CFD 시뮬레이션)

  • Jae-hyeok Lee;Dongil Shin;Ho-Geun Ahn
    • Journal of the Korean Institute of Gas
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    • v.27 no.1
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    • pp.78-85
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    • 2023
  • Fixed-bed reactor Computational Fluid Dynamics (CFD) simulation of methanol steam reforming reaction was performed using the intrinsic kinetic data of the copper-impregnated hydrotalcite catalyst. The activation energy of the copper hydrotalcite catalyst obtained from the previous study results was 97.4 kJ/mol, and the pre-exponential was 5.904 × 1010. Process simulation was performed using the calculated values and showed a similar tendency to the experimental results. And the conversion rate according to the change of the reaction temperature (200 - 450 ℃) and the molar ratio of methanol and water was observed using the intrinsic kinetic data. In addition, mass and heat transfer phenomena analysis of a commercial reactor (I.D. 0.05 - 0.1m, Length 1m) was predicted through axial 2D Symmetry simulation using the power law model of the above kinetic constants.

Estimation of two-dimensional position of soybean crop for developing weeding robot (제초로봇 개발을 위한 2차원 콩 작물 위치 자동검출)

  • SooHyun Cho;ChungYeol Lee;HeeJong Jeong;SeungWoo Kang;DaeHyun Lee
    • Journal of Drive and Control
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    • v.20 no.2
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    • pp.15-23
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    • 2023
  • In this study, two-dimensional location of crops for auto weeding was detected using deep learning. To construct a dataset for soybean detection, an image-capturing system was developed using a mono camera and single-board computer and the system was mounted on a weeding robot to collect soybean images. A dataset was constructed by extracting RoI (region of interest) from the raw image and each sample was labeled with soybean and the background for classification learning. The deep learning model consisted of four convolutional layers and was trained with a weakly supervised learning method that can provide object localization only using image-level labeling. Localization of the soybean area can be visualized via CAM and the two-dimensional position of the soybean was estimated by clustering the pixels associated with the soybean area and transforming the pixel coordinates to world coordinates. The actual position, which is determined manually as pixel coordinates in the image was evaluated and performances were 6.6(X-axis), 5.1(Y-axis) and 1.2(X-axis), 2.2(Y-axis) for MSE and RMSE about world coordinates, respectively. From the results, we confirmed that the center position of the soybean area derived through deep learning was sufficient for use in automatic weeding systems.

Anti-inflammatory Effects of Myrrh Ethanol Extract on Particulate Matter-induced Skin Injury (미세먼지로 인한 피부 각질 세포 손상에서 몰약 에탄올 추출물의 항염증 효과)

  • Young Hee Jung;Yeun Wha Roh;Myongsoo Chong
    • The Journal of Korean Medicine
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    • v.43 no.3
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    • pp.1-15
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    • 2022
  • Objectives: Myrrh have been used as a traditional remedy to treat infectious and inflammatory diseases. However, it is largely unknown whether myrrh ethanol extract could exhibit the inhibitory activities against particulate matter (PM)-induced skin injury on human keratinocytes, HaCaT cells. Therefore, this study was aimed to investigate the inhibitory activity of myrrh ethanol extract on PM-induced skin injury in HaCaT cells. Methods: To investigate the inhibitory effects of myrrh ethanol extract in HaCaT cells, the skin injury model of HaCaT cells was established under PM treatment. HaCaT keratinocyte cells were pre-treated with myrrh ethanol extract for 1 h, and then stimulated with PM. Then, the cells were harvested to measure the cell viability, reactive oxygen species (ROS), pro-inflammatory cytokines including interleukin (IL) 1-beta, IL-6, and tumor necrosis factor (TNF)-𝛼, hyaluronidase, collagen, MMPs. In addition, we examined the mitogen activated protein kinases (MAPKs) and inhibitory kappa B alpha (I𝜅-B𝛼) as inhibitory mechanisms of myrrh ethanol extract. Results: The treatment of myrrh ethanol extract inhibited the PM-induced cell death and ROS production in HaCaT cells. In addition, myrrh ethanol extract treatment inhibited the PM-induced elevation of IL-1beta, IL-6, and TNF-𝛼. Also, myrrh ethanol extract treatment inhibited the increase of hyaluronidase, MMP and decrease of collagen. Furthermore, myrrh ethanol extract treatment inhibited the activation of MAPKs and the degradation of I𝜅-B𝛼. Conclusions: Our result suggest that treatment of myrrh ethanol extract could inhibit the PM-induced skin injury via deactivation of MAPKs and nuclear factor (NF)-𝜅B in HaCaT cells. This study could suggest that myrrh ethanol extract could be a beneficial agent to prevent skin damage or inflammation.