• The Journal of the Convergence on Culture Technology
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• v.5 no.3
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• pp.339-344
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• 2019

Global sequence alignment in search of similarity or homology favors larger size of the sequence because it keeps looking for more similar section between two sequences in the hope that it adds up scores for matched part in the rest of the sequence. If a substantial size of mismatched section exists in the middle of the sequence, it greatly reduces the total alignment score. In this case a whole sequence would be better to be divided into multiple sections. Overall alignment score over the multiple sections of the sequence would increase as compared to global alignment. This method is called multiple local alignment. In this paper, we implement a multiple local alignment algorithm, an extension of Smith-Waterman algorithm and show the experimental results for the algorithm that is able to search for sub-optimal sequence.

• Proceedings of the Korea Information Processing Society Conference
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• 2003.05b
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• pp.1019-1022
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• 2003

두 서열을 비교하여 유사성(similarity)이나 상동성(homology)를 찾기 위한 서열 정렬 방법 중에서 지역 정렬에 많이 사용되는 Smith-Waterman 알고리즘의 제한점인 Mosaic effect와 Shadow effect를 극복하기 위한 효율적인 방법을 살펴보고, 하나의 최대 값이 아닌 다수개의 최대 값을 찾아 다수개를 정렬함으로써 서열내에 존재 할 수 있는 다수개의 지역 정렬을 찾고 Normalized sequence alignment 알고리즘을 이용하여 서열 정렬된 결과들의 우선 순위를 매겨본다.

• Proceedings of the Korea Information Processing Society Conference
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• 2000.10a
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• pp.191-194
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• 2000

본 논문에서는 기존의 정렬 알고리즘의 성능을 향상시키기 위하여 정보블록 전처리 알고리즘(IBPA)이라는 전처리알고리즘을 제안한다. IBPA는 정렬될 리스트(list)에 있는 데이터에 관한 정보를 생성하고, 생성된 정보를 이용하여 각 데이터를 재배치하며, 실제적인 정렬은 기존의 정렬 알고리즘을 그대로 이용하여 이루어진다. IBPA의 성능을 측정해본 결과, 2백만개의 랜덤데이터를 정렬한 경우, O($N^2$)의 평균시간복잡도를 갖는 정렬알고리즘의 0.003%, O(NlogN) 의 평균시간복잡도를 갖는 정렬알고리즘의 52%, 그리고 O(N)의 평균시간복잡도를 갖는 정렬알고리즘의 89%정도의 비교회수만으로도 정렬할 수 있음을 보여주었다.

• Proceedings of the Korea Information Processing Society Conference
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• 2000.10a
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• pp.195-198
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• 2000

본 논문에서는 정보블록알고리즘(IBPA; Information Block Preprocessing Algorithm)을 이용한 정보블록 정렬알고리즘(IBSA; Information Block Sort Algorithm)을 제안하고 그 성능을 평가하였다. IBSA의 시간복잡도는 O(N)이며, 데이터의 분포상태에 영향을 받지 않는다. IBPA의 성능을 측정해본 결과, 2백만개의 랜덤데이터를 정렬한 경우, 중복 값 허용의 경우(a)는 퀵 정렬의 32.42%, 기수정렬의 9%정도의 비교회수만으로도 정렬할 수 있음을 보여주었으며, 중복 값이 없는 경우(b)는 퀵 정렬의 53.12%, 기수정렬의 12.79%정도의 비교회수만으로도 정렬할 수 있음을 보여주었다.

• Proceedings of the Korean Information Science Society Conference
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• 2003.10b
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• pp.847-849
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• 2003

단백질들의 복수서열정렬은 단백질 서열간의 관계를 유추할 수 있는 유용한 도구이다. 최적화된 복수서열 정렬을 얻기 위해 사용되는 가장 유용한 방법인 dynamic programming은 특정한 비용함수를 사용할 수 없기 때문에 특별한 경우 최적의 복수서열정렬을 제공하지 못하는 문제점이 있어 이를 해결하기 위하여 이 논문에서는 부분정렬 개선 기법을 사용한 알고리즘을 제안하였으며, 서열정렬을 하는 사용자가 윈도우 시스템의 GUI환경을 사용하여 서열정렬을 보다 편하게 할 수 있도록 우리가 제안한 알고리즘과 다양한 서열정렬 알고리즘을 및 여러 개의 서열포맷형식을 하나의 프로그램으로 통합한 서열정렬 및 편집 프로그램을 Visual C++ 사용하여 개발하였다.

• Journal of the Korea Institute of Information and Communication Engineering
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• v.21 no.7
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• pp.1327-1334
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• 2017

The Bubble sort graph is node symmetric, and can be used in the data sorting algorithm. In this research we propose and analyze that Half Bubble sort graph that improved the network cost of Bubble sort graph. The Half Bubble sort graph's number of node is n!, and its degree is ${\lfloor}n/2{\rfloor}+1$. The Half Bubble sort graph's degree is $${\sim_=}0.5$$ times of the Bubble sort, and diameter is $${\sim_=}0.9$$ times of the Bubble sort. The network cost of the Bubble sort graph is $${\sim_=}0.5n^3$$, and the network cost of the half Bubble sort graph is $${\sim_=}0.2n^3$$. We have proved that half bubble sort graph is a sub graph of the bubble sort graph. In addition, we proposed a routing algorithm and analyzed the diameter. Finally, network cost is compared with the bubble sort graph.

• The Journal of Society for e-Business Studies
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• v.9 no.3
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• pp.113-128
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• 2004

Up to the present, most of the previous works, related to the alignment of organizations, have been focused on the alignment between business and information technology. Also these works have been done with single element, e.g., view rather than with overall elements such as view, scope, and perspective for enterprise-wide integrated alignment. Meanwhile, an enterprise architecture is a blueprint that represents the structure of components of organizations and their interrelationships. Nowadays, many organizations attempt to make enterprise-wide alignment of business and information technology based on enterprise architecture. Unfortunately, the enterprise-wide alignment is still in a stage of not only conceptual level but also abstract level. Hence, this paper proposes a structured enterprise-wide alignment model to overcome the limitations of existing alignment models. We survey the existing works and propose the conceptual, the logical, and the physical models for enterprise-wide alignment which includes 3-dimensional elements such view, scope, and perspective based on enterprise architecture. Finally, we have shown that the proposed model is better than existing ones through comparing the characteristics of models.

• Journal of the Korea Computer Industry Society
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• v.5 no.2
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• pp.325-330
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• 2004

The Big O notation of a sorting algorithm analysis is an asymptotic algorithm analysis which gives information of a rough mathematical function with an infinite increase of a sample size, without any specification of a probabilistic model. Hence. in an application with a limited finite number of data, it is necessary to test efficiencies of sorting algorithms. I estimated probabilistic models which analyze the number of exchanges varying input sizes to sort. The estimated models to explain the relationship of sorting efficiency on the sample size (N of the sample size and S of the number of exchange of elements) are S=0.9305 $N^{1.339}$ for Quick sort algorithm with O(nlogn) time complexity, and S=0.2232 $N^{2.0130}$ for Insertion sort algorithm with O( $n^2$) time complexity. Furthermore, there are strongly supports that more than 99% of the above relationship could be explained by the estimated models (p＜0.001). These findings suggest it is necessary to analyze sorting algorithm efficiency in applications with a finite number of data or a newly developed sorting algorithm.

• Journal of The Korean Association of Information Education
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• v.22 no.6
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• pp.671-679
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• 2018

Sorting algorithms are the basic building blocks that computer science students need to learn. In recent years, sorting algorithms also have begun to be taught in K-12 classrooms using "the educational sorting game" described in CSUnplugged. However, although the educational sorting game was developed for students aged 8 and up, it is hard for K-12 teachers to play with their students because it is difficult for teachers to understand all of the algorithms and some popular algorithms do not work well in the educational sorting game. In this paper, we discuss what teachers should know, and experimentally analyze the performance of the existing algorithms when applied to the educational sorting game.

• Journal of Industrial Technology
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• v.10
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• pp.73-76
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• 1990

본 논문은 대용량 주기억장치를 갖는 컴퓨터 상에서 효율적으로 수행 될 수 있는 외부 합병정렬 방법에 대하여 기술한다. 제시된 정렬 방법은 주기억 장치의 용량이 정렬될 화일 크기의 제곱근보다 크다는 조건하에서, 주기억 장치를 최대로 이용하여 외부 합병정렬에 소요되는 외부 합병의 횟수를 최소화 함으로써 외부 합병정렬의 성능에 가장 큰 영향을 미치는 입출력 시간을 크게 줄일수 있음을 보였다.