• Title/Summary/Keyword: 유전다양성

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Breeding System and Allozyme Genetic Diversity of Deutzia paniculata Nakai, an Endemic Shrub in Korea (고유종 꼬리말발도리의 생식특성과 동위효소 유전다양성)

  • Chang, Chin-Sung;Kim, Hui
    • Journal of Korean Society of Forest Science
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    • v.103 no.4
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    • pp.519-527
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    • 2014
  • Deutzia paniculata is an endemic species, which is geographically restricted within southern part of Korea. Four populations of D. paniculata were sampled across its natural range, from the smallest population, Mt. Dalum, which held less than 100 individuals, to the largest, Mt. Unmum, over 3,500 individuals. Artificial pollination study showed that D. paniculata had an obligate outcross breeding system. Major pollinators were two bee species, Lasioglossum exiliceps and Allograpta balteata (de Geer). The breeding system and patterns of allozyme variation of D. paniculata were investigated to understand the population biology and to explain on reserve designs and management proposals relevant to this species. D. paniculata held relatively low genetic variation at the eight allozyme loci surveyed. Measures of genetic variation in this species alleles per locus ($A_s=1.33$), proportion of polymorphic loci (P=23.85%), and expected heterozygosity ($H_{es}=0.110$) were similar to values reported for endemic species. Mt. Dalum population (DAL) was composed with one clone based on allozyme data. Individuals of D. paniculata were frequently included in root connected clusters. Population genetic structure between and within four populations was probably the result of shrinking effective population size and the extinctions of intervening populations. For the conservation of genetic diversity, maximum number of different genotype need to be protected based on genetic structure and mating system.

KISTI 생물다양성 DB 구축 현황

  • An, Bu-Yeong
    • Journal of Scientific & Technological Knowledge Infrastructure
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    • s.10
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    • pp.26-49
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    • 2002
  • 생물다양성은 육상 생태계, 해양과 기타 수생 생태계와 이들의 복합 생태계를 포함하는 모든 원천에서 발생한 생물체의 다양성을 말하며, 종내.종간 및 생태계의 다양성을 포함한다. 즉, 생물다양성이란 생물종(Species)의 다양성, 생물이 서식하는 생태계(Ecosystem)의 다양성, 생물이 지닌 유전자(Gene)의 다양성을 총체적으로 지칭하는 말이다. 종다양성(Species diversity)은 한 지역내의 종의 다양성 정도를 말하는 것으로서 분류학적 다양성을 지칭하며, 생태계 다양성(Ecosystem diversity)은 한 생태계에 속하는 모든 생물과 무생물의 상호작용에 관한 다양성을 말한다. 또한 유전적 다양성(Genetic diversity)은 종내의 유전자 변이를 말하는 것으로 같은 종내의 여러 집단들을 의미하거나 한 집단내 개체들 사이의 유전적 변이를 의미한다.

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Genetic diversity of Forsythia ovata Nakai (Oleaceae) based on inter-simple sequence repeats (ISSR) (ISSR 자료에 기초한 만리화(물푸레나무과)의 유전적 다양성)

  • Kim, Sang-Yong;Kim, Young-Dong;Kim, Jin-Seok;Yang, Byeong-Hoon;Kim, Sung-Hee;Lee, Byung-Chun
    • Korean Journal of Plant Taxonomy
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    • v.39 no.1
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    • pp.48-54
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    • 2009
  • We investigated the genetic diversity of an endemic rare species, Forsythia ovata Nakai by examining 93 ISSR amplicons in 84 individuals distributed among five populations. The overall percentage of polymorphic ISSR amplicons was 54.8% and mean number of amplicons per ISSR primer was 6.6. The amount of genetic diversity was relatively lower than other shrub species. The Mt. Seokbyeong and Mt. Seorak B populations had the highest level of genetic diversity. Although the Seokgae-jae population had the lowest level of genetic diversity, the population was genetically the most distinctive from the other populations. About 30.6% of the total variation was allocated between five populations, which was slightly higher than other shrub species. Such a pattern of genetic variation may have resulted from the limited distribution and small population sizes of F. ovata. The UPGMA dendrogram based on Nei's genetic distance showed some decisive geographic patterns. These results suggest that, in addition to the preservation of the natural stands, the conservation of larger number of populations with small number of individuals per population is more effective for the dynamic ex situ conservation and for maintaining the genetic diversity of F. ovata than smaller number of populations with large number of individuals.

Genetic Diversity and Phylogenetic Relationship of Genus Phyllostachys by RAPD Markers (RAPD분자 마커를 이용한 왕대속 대나무의 유전적 다양성 및 계통 관계)

  • Lee, Song-Jin;Huh, Man-Kyu;Shin, Hyun-Cheol;Huh, Hong-Wook
    • Journal of Life Science
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    • v.20 no.6
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    • pp.819-824
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    • 2010
  • Genus Phyllostachys is a long-lived woody species primarily distributed throughout South East Asia. Many species of this genus has been regarded as medically and ecologically important in the world. We evaluated representative samples of the four taxa with RAPD to estimate genetic relationships within the genus Phyllostachys. The percentages of polymorphic loci were 8.9-33.3% at the species level. P. bambusoides was found to show lower genetic diversity (H=0.018) than other species. Total genetic diversity ($H_T$) was 0.315, genetic diversity within populations ($H_S$) was 0.043, the proportion of total genetic diversity partitioned among populations ($G_{ST}$) was 0.659 and the gene flow (Nm) was 0.0263. As some Korean populations were isolated and patchily distributed, they exhibited low levels of genetic diversity. The four taxa of the genus Phyllostachys analyzed were distinctly related to a monophyletic. P. nigra var. henonis. Stapf was found to be more closely related to P. pubescens than to P. nigra. P. bambusoides was quite distinct from the remaining species.

Changing Methodologies and Reshaping Concepts in Biodiversity Science: A Historical Review of Research on Human Genetic Diversity (생물학 연구 방법론 변화에 따른 생물다양성 개념의 전환: 인간 유전다양성 연구 사례)

  • Hyun, Jaehwan
    • Korean Journal of Environmental Biology
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    • v.32 no.4
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    • pp.413-425
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    • 2014
  • In order to shed some light on the historical change of biodiversity concepts, this paper reviews the science and technology studies (STS) literature on the history of biological research on human genetic diversity. By doing that, I show how the notion of genetic diversity in the human population - from "race" to "population" to "biogeographical ancestry" - has changed with methodologies and techniques over the last hundred years. In the meantime, I point out contexts and situations, despite conceptual and methodological developments, that show that current human genetic diversity research is slipping into the past mistakes of scientific racism. This article offers biodiversity researchers an opportunity to consider their own scientific practices on classifying species more reflectively.

Genetic diversity of Millettia japonica in Korea as revealed by ISSR analysis (ISSR 분석으로 살펴본 애기등의 유전적 다양성)

  • Kim, Na-Rae;Kim, Yong-In;Lee, Jung-Hoon;Kim, Young-Dong
    • Korean Journal of Plant Taxonomy
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    • v.43 no.4
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    • pp.267-273
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    • 2013
  • This study employed inter-simple-sequence repeat (ISSR) to assess genetic variation among 189 individuals representing 10 populations (nine in Korea and one in Japan) of Millettia japonica, which has recently been lifted from the endangered species of Korea. The calculated Shannon's information index value (I = 0.2689) of the species was appreciable and was higher than other endangered leguminous woody taxa. Gochang (I = 0.2968), Namhae (I = 0.2951), and Mt. Toham (I = 0.2823) populations showed relatively high genetic diversity, whereas the Kyushu (in Japan) population (I = 0.2487) exhibited the lowest. The results of an analysis of molecular variance indicated that 86.49% of the diversity was attributed to within populations, and 13.51% to differences among populations, suggesting that M. japonica populations do not have significant geographic differentiation and that the gene flow between populations exists to some extent (Nm = 1.8446). Continuous habitat monitoring should be conducted to conserve genetic diversity of M. japonica, particularly for those populations with relatively high genetic diversity. Selection of many individuals from the populations in Gochang, Namhae, and Mt. Toham is thought to be an appropriate strategy for ex situ conservation of M. japonica in Korea.

Genetic Variability of Farmed Olive Flounder (Paralichthys olivaceus) Populations Managed with no Consideration of Genetic Diversity (유전적 다양성이 고려되지 않은 어미 관리에 의한 양식 넙치(Paralichthys olivaceus)의 유전적 다양성의 변화)

  • Noh, Jae Koo;Kim, Hyun Chul;Park, Choul Ji;Lee, Jeong-Ho;Kim, Jong-Hyun;Lee, Mi-Sug;Kim, Woo-Jin;Kim, Kyung-Kil;Myeong, Jeong-In
    • Korean Journal of Ichthyology
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    • v.20 no.4
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    • pp.248-254
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    • 2008
  • Olive flounder (Paralichthys olivaceus) is one of the most popular farmed fish in Korea. Genetic variability of the fish was investigated by means of microsatellite DNA markers. All of the 8 microsatellite loci were analyzed in this study. For the confirmation of genetic variation during a shift in generation, microsatellite variability was compared within the same hatchery strains but produced in different spawning years. When genetic variability of farmed flounders produced in 2006 and 2007 was compared with that of 2003, a marked reduction of genetic variability was observed in the 2006 and 2007 populations. Mean number of alleles per locus and expected mean heterozygosity decreased from 9.75 and 0.796 (in 2003 population) to 7.78 and 0.785 (in 2006 population), respectively. Moreover, we have observed the distortion of allele frequency. These results show that reduced genetic variability of farmed olive flounder in processed generation has lower numbers of alleles and genetic variability than these of wild fish. Our results suggest that to have a sustainable aquaculture of this species, there is need for scientific broodstock management based on genetic variation and more intensive breeding practices to improve genetic diversity and to avoid detrimental inbreeding effects.

Genetic Diversity of High-Quality Rice Cultivars Based on SSR Markers Linked to Blast Resistance Genes (도열병 저항성 유전자와 연관된 SSR 마커를 이용한 양질미 품종의 유전적 다양성)

  • Huhn-Pal Moon
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.49 no.3
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    • pp.251-255
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    • 2004
  • The epidemics of rice blast which occurred in south parts of Korea during the period from 1999 to 2001 and damaged several high quality rice cultivars developed using "Milyang 95" and/or "Milyang 96" as a parent. Genetic diversity of 23 rice cultivars including "Milyang 95" and it's relatives was assessed using 54 simple sequence repeats (SSR) markers reported to be linked to major blast resistance genes. Fifty-four SSR markers representing fifty-seven loci in the rice genome detected polymorphism among the 23 cultivars and revealed a total of 170 alleles with an average of 3.0 alleles per primer, The number of amplified bands ranged from 1 to 7. Several SSR markers including RM249, RM206 and OSR20 were informative for assessing the genetic diversity of relatively closed japonica rice cultivars. The 23 cultivars were classified into four groups by cluster analysis based on Nei's genetic distances, and the cultivars developed from same parents showed a tendency to cluster together that is consistant with genealogical information. High quality rice cultivars, Daesanbyeo, Donganbyeo, and Milyang 95 belonged to the same cluster, At the loci, RM254 and OSR32, all of the cultivars derived from the crosses using "Milyang 95" shared same alleles, suggesting that these japonica cultivars might carry alleles that are identical by descent. Evaluation of 23 rice cultivars against blast needs to be confirmed regarding the relationship between genotype and blast resistance.p between genotype and blast resistance.

Genetic Variation of Foxtail Millet [Setaria italica (L.) P. Beauv.] Among Accessions Collected From Korea Revealed by AFLP Markers (AFLP 분자마커를 이용한 우리나라에서 수집한 조 계통들의 유전적 다양성)

  • Kim, Eun-Ji;Sa, Kyu-Jin;Lee, Ju-Kyong
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.56 no.4
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    • pp.322-328
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    • 2011
  • AFLP markers were employed to detect genetic diversity and genetic relationship among 26 accessions of foxtail millet collected from Korea. Analysis of 26 accessions of foxtail millet with nine AFLP primer set combinations detected a total of 170 bands, of which 145 (85.3%) showed polymorphic at the species level. The phenotypic diversity (Hs) calculated for the nine primer combinations ranged from 1.84 to 6.8, with an average of 3.85. The average phenotypic diversity values were 3.39 and 2.99 for accessions collected from Gangwon province (Group 1), and accessions collected from the other areas including Gyeonggi province (Group 2), respectively. In the cluster analysis of 26 accessions, two major groups were recognized at 73% genetic similarity. Group I includes 13 accessions, which were collected in Gangwon province, and 1 accession, which was collected in Gyeonggi province, with genetic similarity of 76.8%. Group II includes two accessions, which were collected in Gangwon province, and 10 accessions, which were collected in the other areas with genetic similarity of 78.9%. The presenting data on the assessment of genetic diversity and genetic relationships among Korean accessions of foxtail millet will be helpful for efficient collection or conservation strategy of foxtail millet germplasm in Korea.