• Journal of fish pathology
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• v.24 no.3
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• pp.247-254
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• 2011

The purpose of this study was to obtain reference data of parameters for hematological health diagnosis in cultured freshwater fish and also evaluate application of automatic dry-type chemistry analyzer (FUJI DRI-CHEM 3000) used to those blood tests. A blood profile of total 200 fish for rainbow trout (Onchorhynchus mykiss), israel carp (Cyprinus carpio), tilapia (Oreochromis niloticus) and eel (Anguilla japonica) cultured in Inland Fisheries Research Institute of NFRDI was determined by hemoglobin (Hb) and plasma chemistry tests: total protein (TP), albumin (ALB), alkaline phosphatase (ALP), blood urea nitrogen (BUN), lactate dehydrogenase (LDH), triglyceride (TG), total cholesterol (TCHO), creatinine (CRE), aspartate aminotransferase (AST), alanine aminotransferase (ALT), glucose (GLU). The values of ALT, TG, LDH, ALB, TCHO, AST and ALP were outside from the minimum and/or maximum of the established detectable range of the analyzer. ALT and TG were not detectable in the range of 67%~61.5%. LDH, ALB and TCHO were not detectable in the range of 36~17%. AST and ALP were not detectable in the range of 5.5~0.5%. However, the values of BUN, CRE, GLU, Hb and TP were below the detectable limits of the analyzer.

• Journal of the Korean Society of Marine Environment & Safety
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• v.24 no.6
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• pp.773-784
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• 2018

In this study, we examined the UA (upwelling age) using wind data of AWS/ASOS in the East Sea coast and the correlation between UA and SST (sea surface temperature) from May to August in 1995 to 2016. The data used the 6 observations of the wind data of AWS/ASOS and the SST data of the COD/RISA provided by the National Institute and Fisheries Science near the East Sea coast. The UA was calculated quantitatively low but it rose when the actual cold water mass occurred. Correlation analysis between UA and SST showed the negative (-) r (correlation coefficient) predominately. At the time of cold-water mass in June to August 2013, the r had a very high negative value of -0.65 to -0.89 in the 6 observations. It proved that as the UA increases, the SST is lower. By knowing the UA, we were able to evaluate the trend of upwelling in the cold-water mass of the East Sea coast in the long term and it will contribute to minimizing the damage to aquatic organisms according to the size and intensity of the upwelling.

• Journal of Wetlands Research
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• v.20 no.4
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• pp.322-329
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• 2018

In this study the community characteristics of benthic macroinvertebrates distributed in stream of Gaya Mountain were figured out and the correlation with the physicochemical water quality factors were calculated. During the study period, total 4 phyla, 6 classes, 13 orders, 36 families, 100 species of benthic macroinvertebrates were recorded. Ephemeroptera were the most dominant followed by Trichoptera, Plecoptera, Diptera, Non-insecta, Hemiptera, and Odonata. The overall dominant species was Cincticostella levanidovae by dominance rate in 17.72%, subdominant species was Hydatophylax nigrovittatus by dominance rate in 6.15%. The biotic indices showed the diversity index 5.17, richness index 12.44, dominant index 0.24 and evenness index 0.78, there is no absolutely dominant benthic macroinvertebrates in the stream of Gaya Mountain. We identified the correlation between the species number and individuals of main taxa and the physicochemical water quality factors. Ephemeroptera and Plecoptera showed a negative correlation with water temperature, but they represented a positive correlation with the dissolved oxygen. This results suggest that water temperature and dissolved oxygen are important physicochemical water quality factors affects the distribution of Ephemeroptera and Plecoptera, the indicators of clean water stream.

• Korean Journal of Remote Sensing
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• v.38 no.6_1
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• pp.1541-1555
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• 2022

Red tide has potential to harm marine ecology and aquaculture. Research on detecting red tide using various optical remote sensors has been conducted, but most of existing algorithms for detecting red tide has limitations, especially in shallow coastal waters with high levels of suspended sediment. For enhanced understanding of the optical behavior of red tide waters, analysis on remote sensing reflectance and water constituent is becoming increasingly important. This study analyzed the optical remote sensing data and water quality variables(Chl-a_(Spec), SPM, a_ph, a_d, Turbidity, Chl-a_(HPLC), Dominant species) of red tide waters. The data were collected from ship-based campaigns. In addition to the research on detecting red tide, the remote sensing reflectance and extinction coefficients for mesodinium and cochlodinium species were also analyzed. Through the analysis, it was possible to estimate the red tide chlorophyll concentration based on a specific wavelength of the remote sensing reflectance. The study found that chlorophyll concentration and phytoplankton absorption coefficient were highly correlated(R²=0.9), and that the RE_diff formula provided a more accurate estimate of red tide concentration than the B-G ratio.

• Journal of Life Science
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• v.31 no.11
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• pp.1046-1055
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• 2021

Vanillin is the primary flavor and fragrance compound of natural vanilla and is extensively used in the food, beverage, perfumery, pharmaceutical industries, and other applications. Vanillin can be produced by chemical synthesis, extraction from vanilla plants, microbial bioconversion of natural precursors to vanillin, and direct fermentation using glucose. Currently, most commercially available vanillin is produced by extraction from cured vanilla pods and by chemical synthesis using guaiacol and glyoxylic acid as starting raw materials. Due to environmental issues, health complaints, preference for natural sources, and the limited supply and soaring price of natural vanilla, biotechnology-based vanillin production is regarded as a promising alternative. As many microorganisms that are able to metabolize several natural precursors, including ferulic acid, eugenol, isoeugenol, and lignin, and accumulate vanillin, have been screened and evaluated, myriad strategies and efforts have been employed for the development of commercially viable production technology. This review outlines the recent advances in the biotechnological production of natural vanillin with the use of these natural precursors. Moreover, it highlights the recent engineering approaches for the production of natural vanillin from renewable carbon sources based on the de novo biosynthetic pathway of vanillin from glucose, together with appropriate solution strategies to overcome the challenges posed to increase production titers.

• Journal of Life Science
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• v.32 no.2
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• pp.94-100
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• 2022

Chronic infection by hepatitis B virus (HBV) greatly increases the risk for liver cirrhosis and hepatocellular carcinoma (HCC). The outcome of HBV infection is shaped by the complex interplay of the mode of transmission, host genetic factors, viral genotype, adaptive mutations, and environmental factors. The pregenomic RNA transcription of HBV for their replication is regulated by the core promoter activation. Core promoter mutations have been the reason for acute liver failure and are associated with HCC development. We obtained HBV genes from a patient in Myanmar who was infected with HBV and identified gene variations in the core promoter region. For measuring the relative transactivation activity of the core promoter, we prepared the core-promoter reporter construct. Among the gene variations of the core promoter, the mutations of C1731T and G1806A were associated with increase in the transactivation of the HBV core promoter. Through computer analysis for searching for a tentative transcription factor binding site, we showed that the mutations of C1713T and G1806A newly created C/EBPβ and XBP1-responsive elements of the core promoter, respectively. The ectopic expression of C/EBPβ largely increased the HBV core promoter containing the C1713T mutation and that of XBP1 activated the M95 promoter containing the G1806A mutation. Our efforts to treat and prevent HBV infections are hampered by the emergence of drug-resistant mutations and vaccine-escape mutations. Our results provide the biological properties and clinical significance of specific HBV core promoter mutations.

• Journal of Marine Life Science
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• v.1 no.1
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• pp.31-40
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• 2016

Macrofauna and community structure were investigated seasonally at five sites in subtidal zone of Uljin on the east coast of Korea from March 2010 to February 2013. A total of 146 species were collected and identified, including 67 molluscs, 27 arthropods, and 8,688 individuals, including 6,468 arthropods, 1,098 molluscs and 584 echinoderms. In the seasonal investigation, summer has been the highest in 96 species and 2,525 number of individuals. Site 4 was the highest species but number of individuals were the lowest (81 species with 1,377 number of individuals), whereas site 3 was the lowest species and number of individuals were the highest (45 Species with 2,213 number of individuals). These result indicate that Balanus species affected to richness and the other side a gastropod influence by diversity and evenness. And site 3 seems to be good habitate environment for Balanus as the result of 83.4% of Balanus rather than other sites.

• Korean Journal of Ichthyology
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• v.34 no.4
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• pp.262-269
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• 2022

A distribution survey was conducted from 2018 to 2020 to evaluate the distribution status, habitat characteristics, and extinction threat of the short ninespine stickleback Pungitius kaibarae (Gasterosteidae). Literature reports of P. kaibarae distribution have been sorted by each period, 1980~1996, 1997~2005, and 2007~2017, and the samples were collected in 32, 43, and 64 stations for each period. Among the 75 streams and 193 sampling sites investigated during the study period, 1,400 P. kaibarae individuals were collected from 26 streams at 39 sites. The main habitat of P. kaibarae was downstream or brackish water zones with a low altitude, slow water velocity, and many aquatic plants. The main reasons for the decline in population size were assumed to be drought and flood, river work for flood restoration and river maintenance, bridges construction, and predation by the exotic fish species Micropterus salmoides. Previous evidence reported a 42.6% reduction in occupancy within 10 years, a decline in habitat quality, and the spread and impact of the exotic fish species Micropterus salmoides. Therefore, P. kaibarae is now considered a Vulnerable (VU A2ace) species based on the IUCN Red List categories and criteria. Therefore, P. kaibarae should be redesignated as an endangered species by the Ministry of Environment and systematically managed.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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• v.12 no.2
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• pp.61-72
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• 2007

The relationship between North Pacific chum salmon (Oncorhynchus keta) population and climate variability was investigated in the North Pacific ecosystem. Time-series for the Aleutian Low Pressure, Southern Oscillation, Arctic Oscillation, and Pacific Decadal Oscillation (PDO) indices dating back to 1950 are compared with the chum salmon catch using a cross-correlation function (CCF) and cumulative sum (CuSum) of anomalies. The results of CCF and CuSum analyses indicated that there was a major change in climate during the mid 1970s, and that the chum salmon population responded to this climate event with a time-lag. The PDO and chum salmon returns showed a highly significant correlation with a time-lag of 3 years, while the AOI with a time-lag of $6{\sim}7$ years. The favorable environments for fry chum salmon might cause better growth in the coastal areas, but higher growth rate during the early stage does not seem to be related to the improved return rate of spawning adults. Rather, growth in the Okhotsk Sea or the Bering Sea during immature stages has a significant correlation with return rate, which implies the size-related mortality process. The development of a local climate index is necessary to elucidate the effect of climate variability on the marine ecosystem around the Korean Peninsula.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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• v.15 no.4
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• pp.192-202
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• 2010

Submarine groundwater discharge (SGD) has been recognized as a provider for freshwater, nutrients, and dissolved constituents from continents to the oceans and paid more attention with regard to the mass balance of water or dissolved constituents on local and global scales. The submarine discharge of fresh groundwater (fresh SGD) through seepage or springs in coastal ocean may be especially important in aspects of water resource and marine environment managements in the future. Based on the worldwide compilations of observed fresh SGD, our review reveals that fresh SGD occurs in various marine environments along most shoreline of the world and the global estimates of fresh SGD were approximately 0.01-17% of surface runoff. In addition, the input of fresh SGD calculated and investigated in this study were about 50%, 57%, 89%, and 420% of total river discharge in Jeju Island, Yeongil Bay, Masan Bay, and Yeoja Bay, respectively. These inputs from fresh SGD along the shoreline of Korea Peninsula are much higher than those of the whole world, greatly vary with the region. However, since these estimates are based on the water balance method mainly used in coastal ocean, we have to perform continuous monitoring of various parameters, such as precipitation, tide, evapotanspiration and water residence time, which have an impact on the water balance in a lot of areas for evaluating the precise input of fresh SGD. In addition, since the method estimating the input of fresh SGD has brought up many problems, it is required to make an intercomparison between various methods such as hydrogeological assumption, numerical modeling, and seepage meter.