• Advances in environmental research
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• v.4 no.4
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• pp.247-262
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• 2015

The few lignin biomarker studies conducted in tropical environments are hampered by having to use references signatures established for plants and soils characteristic of the temperate zone. This study presents a lignin biomarker analysis (vanillyls (V), p-hydroxyls (P), syringyls (S), cinnamyls (C)) of the dominant plant species and soil horizons as well as an analysis of the interrelated terrigenous organic matter (TOM) dynamics between vegetation and soil of the $Tapaj{\acute{o}}s$ river region, an active colonization front in the Brazilian Amazon. We collected and analyzed samples from 17 fresh dominant plant species and 48 soil cores at three depths (0-5 cm, 20-25 cm, 50-55 cm) from primary rainforest, fallow forest, subsistence agriculture fields and pastures. Lignin signatures in tropical plants clearly distinguish from temperate ones with high ratios of Acid/aldehyde of vanillyls ((Ad/Al)v) and P/V+S. Contrary to temperate environments, similarly high ratios in tropical soils are not related to TOM degradation along with pedogenesis but to direct influence of plants growing on them. Lignin signatures of both plants and soils of primary rainforest and fallow forest clearly distinguish from those of non-forested areas, i.e., agriculture fields and pastures. Attalea speciosa Palm trees, an invasive species in all perturbed landscapes of the Amazon, exhibit lignin signatures clearly distinct from other dominant plant species. The study of lignin signatures in tropical areas thus represents a powerful tool to evaluate the impact of primary rainforest clearing on TOM dynamics in tropical areas.

• Geomechanics and Engineering
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• v.16 no.5
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• pp.547-558
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• 2018

Studies of soil dynamic properties in Malaysia are still very limited. This study aims to investigate the dynamic properties of two selected tropical residual soils (i.e., Sandy Clay and Sandy Silt) and a sand mining trail (Silty Sand) in Peninsular Malaysia using 1g shaking table test. The use of 1g shaking table test for soil dynamic testing is often constrained to large strain level and small confining pressure only. Three new experimental setups, namely large laminar shear box test (LLSBT), small chamber test with positive air pressure (SCT), and small sample test with suction (SSTS) are attempted with the aims of these experimental setups are capable of evaluating the dynamic properties of soils covering a wider range of shear strain and confining pressure. The details of each experimental setup are described explicitly in this paper. Experimental results show that the combined use of the LLSBT and SCT is capable of rendering soil dynamic properties covering a strain range of 0.017%-1.48% under confining pressures of 5-100 kPa. The studied tropical residual soils in Malaysia behaved neither as pure sand nor clay, but show a relatively good agreement with the dynamic properties of residual soils in Singapore. Effects of confining pressure and plasticity index on the studied tropical residual soils are found to be insignificant in this particular study.

• Korean Journal of Soil Science and Fertilizer
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• v.18 no.3
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• pp.260-264
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• 1985

Ferrallitique soils are real tropical soils, with an oxic B horizon such a horizon is at least 30cm thick, has > 15% clay, diffuse horizon boundaries, no weatherable minerals and a CEC of clay < 16 me per 100g. These soils are in general the real reddish or yellowish very uniform tropical clay soils with an orchric A horizon and a deep B horizon, otherwise almost characterless. The soil profile looks uniform and maybe some metres thick. It is well drained, has a good permeability and a stable structure. As there is little or no weatherable mineral, because these soils are old and exhausted of bares, natural fertility is very low. There has been a complicated process of soil formation. Intensive and continuous weathering over a very long period has resulted in leaching of bases and silica, in relative accumulation of resquioxides and in formation of kaolinitic clay. Until recently, there has been much confusion in classifing and naming tropical soils. Particularily what are now Ferralsols in the FAO scheme, and Oxisols in Soil Taxonomy. Old names of various classification system are: Lateritic soils, Latosols, Ferrallitic soils. For agriculture, these soils are important, but chemically very poor, not only because of a low CEC but also because of deficiency of bases, especially Ca, Mg, and K, strong P fixation and high exchangeable Al percentage.

• Journal of Forest and Environmental Science
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• v.29 no.2
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• pp.116-124
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• 2013

Differences in rates and patterns of nitrogen cycling have been correlated with nitrogen stable isotope measurements in forest ecosystems of tropical and temperate regions, but limited similar work has been conducted in sub-tropical forests. This study investigated patterns in stable N isotopic composition in a subtropical forest in Taiwan by sampling three soil profiles and overstory and understory foliage. Soil ${\delta}^{15}N$ in the forest floor ranged from -1.8 to -1.8‰. Mineral soils had higher ${\delta}^{15}N$ (4.1 to 6.0‰). Foliage ${\delta}^{15}N$ in overstory trees ranged from -6.6 to -2.0‰, and understory foliage ${\delta}^{15}N$ ranged from -5.0 to -1.2‰. There was a weak correlation between foliar % N and ${\delta}^{15}N$ ($r^2=0.214$). Compared to results from similar surveys in tropical and temperate forests, foliar ${\delta}^{15}N$ values were generally lower. These results help highlight the need for improved knowledge regarding the relationships between patterns in N stable isotopes and processes affecting rates of N cycling, especially as related to wider scale patterns in forest ecosystems within the east-Asia region.

• Geotechnical Engineering
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• v.12 no.4
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• pp.115-130
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• 1996

The definition of laterite or lateritic soils is discussed on a climatic condition of tropical and semitropical regions, and the weathering index is indicated by the chemical composition. The chemical composition of$(Fe_2O_3+Al_2O_3)$ of the weathered granite residual soils in tropical and the temperate regions which shelus laterization usually ranges from 0.2 to 0.5. This study shows that the chemical ratio of the Chonju Ajung site is about 0.2U, and that of the regions along the shore of the western sea of Hongsong and Taechon is about 0.33. The chemical ratio of the non-laterite is less than 0.2, and the Kyougju Pulguksa site confirmed about 0.17, The X-Ray diffraction test shows that the clay mineral of the laterite soils is made of kaolinite, this X -Ray result indicates the same characteristics compared with the wrathered granite residual soils of other sites.

• Geomechanics and Engineering
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• v.21 no.4
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• pp.337-348
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• 2020

Tropical organic soils having more than 65% of organic matters are named "peat". This soil type is extremely soft, unconsolidated, and possesses low shear strength and stiffness. Different conventional and industrial binders (e.g., lime or Portland cement) are used widely for stabilisation of organic soils. However, due to many factors affecting the behaviour of these soils (e.g., high moisture content, fewer mineral particles, and acidic media), the efficiency of the conventional binders is low and/or cost-intensive. This research investigates the impact of different constituents of cement-sodium silicate grout system on the compressibility behaviour of organic soil, including settlement and void ratio. A microstructure analysis is also carried out on treated organic soil using Scanning Electron Micrographs (SEM), Energy Dispersive X-ray spectrometer (EDX), and X-ray Diffraction (XRD). The results indicate that the settlement and void ratio of treated organic soils decrease gradually with the increase of cement and kaolinite contents, as well as sodium silicate until an optimum value of 2.5% of the wet soil weight. The microstructure analysis also demonstrates that with the increase of cement, kaolinite and sodium silicate, the void ratio and porosity of treated soil particles decrease, leading to an increase in the soil density by the hydration, pozzolanic, and polymerisation processes. This research contributes an extra useful knowledge to the stabilisation of organic soils and upgrading such problematic soils closer to the non-problematic soils for geotechnical applications such as deep mixing.

• Journal of Microbiology and Biotechnology
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• v.25 no.7
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• pp.978-987
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• 2015

Aluminum (Al) toxicity is one of the greatest limitations to agriculture in acid soils, particularly in tropical regions. Arbuscular mycorrhizal fungi (AMF) can supply plants with nutrients and give protection against Al toxicity. The aim of this work was to evaluate the effects of soil liming (i.e., reducing Al saturation) on the AMF community composition and structure in the roots of maize lines contrasting for Al tolerance. To this end, we constructed four 18S rDNA cloning libraries from L3 (Al tolerant) and L22 (Al sensitive) maize lines grown in limed and non-limed soils. A total of 790 clones were sequenced, 69% belonging to the Glomeromycota phylum. The remaining sequences were from Ascomycota, which were more prominent in the limed soil, mainly in the L3 line. The most abundant AM fungal clones were related to the family Glomeraceae represented by the genera uncultured Glomus followed by Rhizophagus and Funneliformis. However, the most abundant operational taxonomic units with 27% of the Glomeromycota clones was affiliated to genus Racocetra. This genus was present in all the four libraries, but it was predominant in the non-limed soils, suggesting that Racocetra is tolerant to Al toxicity. Similarly, Acaulospora and Rhizophagus were also present mostly in both lines in non-limed soils. The community richness of AMF in the non-limed soils was higher than the limed soil for both lines. The results suggest that the soil Al saturation was the parameter that mostly influences the AMF species composition in the soils in this study.

• Ecology and Resilient Infrastructure
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• v.5 no.1
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• pp.11-18
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• 2018

Phosphorous remains as one of the most limiting nutrients to plant growth, second only to nitrogen. Research on use of biochar as a soil amendment for available phosphorus in temperate calcareous soils has limited studies compared with to tropical acidic soils. An incubation experiment to assess phosphorous availability in a biochar amended calcareous soil under inorganic (Fused superphosphate, FSP) and organic fertilizer (bone meal, BM) and respectively, at the dose of 40, 80 and $120mg\;P\;kg^{-1}$ was carried out. Soil was incubated at $25^{\circ}C$ for 70 days. Results show that the rate of increase in available P was proportional to the fertilizer application rate with or without biochar amendment. Biochar did not have a significant effect on soils amended with either fertilizeron the values of available P. However, time had a significant effect (p<0.001) on the amount of available P during the incubation period. Inorganic fertilizer treatments had recorded high amount of available P with time compared to organic fertilizer treatments. Organic fertilizer treatment sample were significantly not different from control and for most of the incubation time biochar acted as a soil conditioner. Further research is required to understand the holistic and long-term effect of biochar.

• Journal of Forest and Environmental Science
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• v.29 no.1
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• pp.1-14
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• 2013

Acacia mangium is an evergreen fast-growing tropical tree, which can grow up to 30 m tall and 50 cm thick, under favorable conditions. It is a low-elevation species associated with rain forest margins and disturbed, well-drained acid soils. It is native to Papua, Western Irian Jaya and the Maluku islands in Indonesia, Papua New Guinea and north-eastern Queensland in Australia. Due to its rapid growth and tolerance of very poor soils, A. mangium was introduced into some Asian, African and western hemisphere countries where it is used as a plantation tree. A. mangium has good quality wood traits, such as a comparatively low proportion of parenchymatous cells and vessels, white and hard wood, and high calorific value. Therefore, it is useful for a variety of purposes, such as furniture, cabinets, turnery, floors, particleboard, plywood, veneer, fence posts, firewood, and charcoal. It is also being used in pulp and paper making because it has good pulp traits, with high yields of pulp, quality of kraft, and produces paper with good optical, physical and surface properties. Because there are significant provenance differences in growth rate, stem straightness, heartwood formation and frequency of multiple leaders, the productivity and quality also varies depending upon environmental conditions, so genetic improvement programmes have been undertaken in countries like Australia, India, Indonesia, Malaysia, the Philippines, Taiwan and Thailand. The programme includes provenance identifications and testing, plus tree selection and clonal multiplication, establishment of seed orchards and hybridization. The phenology, reproductive biology, fruit characteristics, silvicultural practices for cultivation, pest and diseases problems, production of improved planting stock, harvesting, wood properties and utilization have been discussed in this paper.

• Journal of Microbiology and Biotechnology
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• v.18 no.12
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• pp.1966-1974
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• 2008

A typical tropical soil from the northeast of Brazil, where an important terrestrial oil field is located, was accidentally contaminated with a mixture of oil and saline production water. To study the bioremediation potential in this area, molecular methods based on PCR-DGGE were used to determine the diversity of the bacterial communities in bulk and in contaminated soils. Bacterial fingerprints revealed that the bacterial communities were affected by the presence of the mixture of oil and production water, and different profiles were observed when the contaminated soils were compared with the control. Halotolerant strains capable of degrading crude oil were also isolated from enrichment cultures obtained from the contaminated soil samples. Twenty-two strains showing these features were characterized genetically by amplified ribosomal DNA restriction analysis (ARDRA) and phenotypically by their colonial morphology and tolerance to high NaCl concentrations. Fifteen ARDRA groups were formed. Selected strains were analyzed by 16S rDNA sequencing, and Actinobacteria was identified as the main group found. Strains were also tested for their growth capability in the presence of different oil derivatives (hexane, dodecane, hexadecane, diesel, gasoline, toluene, naphthalene, o-xylene, and p-xylene) and different degradation profiles were observed. PCR products were obtained from 12 of the 15 ARDRA representatives when they were screened for the presence of the alkane hydroxylase gene (alkB). Members of the genera Rhodococcus and Gordonia were identified as predominant in the soil studied. These genera are usually implicated in oil degradation processes and, as such, the potential for bioremediation in this area can be considered as feasible.