• Title/Summary/Keyword: transmission diversity

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Phylogenetic Analysis of env Gene V3-V5 Region of HIV-1 Subtype A Isolates from Korean (한국인 HIV 감염자에서 분리된 HIV-1 Subtype A의 env 유전자 V3-V5 부위의 계통적 분석)

  • Lee, Joo-Shil;Kim, Eun-Young;Kang, Chun;Nam, Jeong-Gu;Lee, Sung-Rae;Koo, Bon-Ki;Shin, Yung-Oh
    • The Journal of Korean Society of Virology
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    • v.29 no.2
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    • pp.119-127
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    • 1999
  • Phylogenetic analysis was conducted to monitor transmission of HIV and to investigate the genetic structure of primary isolates from 12 HIV-1 subtype A infected Koreans. The individuals infected with subtype A viruses had been diagnosed as HIV-1 seropositives during the period 1987 to 1995 and blood samples have been collected from 1991 to 1997. DNA of each individual was isolated from uncultured or cultured peripheral blood mononuclear cells. V3-V5 (0.7 kb) fragment of HIV-1 env gene was amplified by nested polymerase chain reaction and the PCR products were sequenced. The mean value of the divergence of nucleotide of HIV-1 env V3-V5 fragment was $17.0{\pm}4.06%$ ($8.6{\sim}25.8%$) within HIV-1 subtype A isolates from Koreans. This diversity was higher than those of African isolates ($13.7{\pm}2.66%$). In the phylogenetic tree, Korean subtype A isolates were not grouped together, but intermingled into African isolates. The results of this study suggested that HIV-1 subtype A variants be introduced from multiple sites of Africa into Korea and the big genetic diversity of Korea HIV-1 subtype A isolates may be further influenced by the range of geographic locations in which the infection occurred rather than the elapsed time between infection and collection of samples and the disease progression.

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Cutaneous Microflora from Geographically Isolated Groups of Bradysia agrestis, an Insect Vector of Diverse Plant Pathogens

  • Park, Jong Myong;You, Young-Hyun;Park, Jong-Han;Kim, Hyeong-Hwan;Ghim, Sa-Youl;Back, Chang-Gi
    • Mycobiology
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    • v.45 no.3
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    • pp.160-171
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    • 2017
  • Larvae of Bradysia agrestis, an insect vector that transports plant pathogens, were sampled from geographically isolated regions in Korea to identify their cutaneous fungal and bacterial flora. Sampled areas were chosen within the distribution range of B. agrestis; each site was more than 91 km apart to ensure geographical segregation. We isolated 76 microbial (fungi and bacteria) strains (site 1, 29; site 2, 29; site 3, 18 strains) that were identified on the basis of morphological differences. Species identification was molecularly confirmed by determination of universal fungal internal transcribed spacer and bacterial 16S rRNA gene sequences in comparison to sequences in the EzTaxon database and the NCBI GenBank database, and their phylogenetic relationships were determined. The fungal isolates belonged to 2 phyla, 5 classes, and 7 genera; bacterial species belonged to 23 genera and 32 species. Microbial diversity differed significantly among the geographical groups with respect to Margalef's richness (3.9, 3.6, and 4.5), Menhinick's index (2.65, 2.46, and 3.30), Simpson's index (0.06, 0.12, and 0.01), and Shannon's index (2.50, 2.17, and 2.58). Although the microbial genera distribution or diversity values clearly varied among geographical groups, common genera were identified in all groups, including the fungal genus Cladosporium, and the bacterial genera Bacillus and Rhodococcus. According to classic principles of co-evolutionary relationship, these genera might have a closer association with their host insect vector B. agrestis than other genera identified. Some cutaneous bacterial genera (e.g., Pseudomonas) displaying weak interdependency with insect vectors may be hazardous to agricultural environments via mechanical transmission via B. agrestis. This study provides comprehensive information regarding the cutaneous microflora of B. agrestis, which can help in the control of such pests for crop management.

AT-DMB Reception Method with Eigen-space Beamforming Algorithm (고유 공간 빔형성 알고리즘을 이용한 AT-DMB 수신 방법)

  • Lee, Jae-Hong;Choi, Seung-Won
    • Journal of Broadcast Engineering
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    • v.15 no.1
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    • pp.122-132
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    • 2010
  • AT-DMB system has been developed to increase data rate up to double of conventional T-DMB in the same bandwidth while maintaining backward compatibility. The AT-DMB system adopted hierarchical modulation which adds BPSK or QPSK signal as enhancement layer to existing DQPSK signal. The enhancement layer signal should be small enough to maintain backward compatibility and to minimize the coverage loss of conventional T-DMB service coverage. But this causes the enhancement layer signal of AT-DMB susceptible to fading effect in transmission channel. A turbo code which has improved error correction capability than convolutional code, is applied to the enhancement layer signal of the AT-DMB system for compensating channel distortion. However there is a need for other solutions for better reception of AT-DMB signal in receiver side without increasing transmitting power. In this paper, we propose adaptive array antenna system with Eigen-space beamforming algorithm which benefits beamforming gain along with diversity gain. We analyzed the reception performances of AT-DMB system in indoor and mobile environments when this new smart antenna system and algorithm is introduced. The computer simulation results are presented along with analysis comments.

Present Status and Future Management Strategies for Sugarcane Yellow Leaf Virus: A Major Constraint to the Global Sugarcane Production

  • Holkar, Somnath Kadappa;Balasubramaniam, Parameswari;Kumar, Atul;Kadirvel, Nithya;Shingote, Prashant Raghunath;Chhabra, Manohar Lal;Kumar, Shubham;Kumar, Praveen;Viswanathan, Rasappa;Jain, Rakesh Kumar;Pathak, Ashwini Dutt
    • The Plant Pathology Journal
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    • v.36 no.6
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    • pp.536-557
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    • 2020
  • Sugarcane yellow leaf virus (SCYLV) is a distinct member of the Polerovirus genus of the Luteoviridae family. SCYLV is the major limitation to sugarcane production worldwide and presently occurring in most of the sugarcane growing countries. SCYLV having high genetic diversity within the species and presently ten genotypes are known to occur based on the complete genome sequence information. SCYLV is present in almost all the states of India where sugarcane is grown. Virion comprises of 180 coat protein units and are 24-29 nm in diameter. The genome of SCYLV is a monopartite and comprised of single-stranded (ss) positive-sense (+) linear RNA of about 6 kb in size. Virus genome consists of six open reading frames (ORFs) that are expressed by sub-genomic RNAs. The SCYLV is phloem-limited and transmitted by sugarcane aphid Melanaphis sacchari in a circulative and non-propagative manner. The other aphid species namely, Ceratovacuna lanigera, Rhopalosiphum rufiabdominalis, and R. maidis also been reported to transmit the virus. The virus is not transmitted mechanically, therefore, its transmission by M. sacchari has been studied in different countries. SCYLV has a limited natural host range and mainly infect sugarcane (Sachharum hybrid), grain sorghum (Sorghum bicolor), and Columbus grass (Sorghum almum). Recent insights in the protein-protein interactions of Polerovirus through protein interaction reporter (PIR) technology enable us to understand viral encoded proteins during virus replication, assembly, plant defence mechanism, short and long-distance travel of the virus. This review presents the recent understandings on virus biology, diagnosis, genetic diversity, virus-vector and host-virus interactions and conventional and next generation management approaches.

Seaweed ethnobotany of eastern Sorsogon, Philippines

  • Dumilag, Richard V.;Belgica, Teresa Haide R.;Mendoza, Lynn C.;Hibay, Janet M.;Arevalo, Abel E. Jr.;Malto, Mark Ariel D.;Orgela, Elden G.;Longavela, Mabille R.;Corral, Laurence Elmer H.;Olipany, Ruby D.;Ruiz, Caesar Franz C.;Mintu, Cynthia B.;Laza, Benilda O.;Pablo, Mae H. San;Bailon, Jinky D.;Berdin, Leny D.;Calaminos, Franklin P.;Gregory, Sheryll A.;Omoto, Annie T.;Chua, Vivien L.;Liao, Lawrence M.
    • ALGAE
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    • v.37 no.3
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    • pp.227-237
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    • 2022
  • Knowledge on the seaweeds of eastern Sorsogon in the Philippines is uneven. Not only is eastern Sorsogon among the areas of high seaweed diversity but locals there have interacted with seaweeds for ages. Despite seaweeds' assumed importance to Sorsoganon, ethnobotanical records are missing. In this study, we documented the traditional knowledge on seaweed use and determined the rate of knowledge transmission among the locals of eastern Sorsogon. Vernacular names and modes of preparation were given of the 12 identified species bearing culinary and medicinal importance. Ten species were eaten while three were used therapeutically. Based on ethnobotanical indices, Caulerpa chemnitzia ecad turbinata and Gelidiella acerosa were the most important seaweeds. The least cited was Caulerpa racemosa. Our study demonstrated that most of the seaweed resources in eastern Sorsogon remain largely untapped, as the identified ethnotaxa were only about 5% of the total seaweed species diversity reported for the area. The seaweed knowledge in eastern Sorsogon appeared to be homogenous across age groups with primary sources of knowledge biased towards female relatives (mothers and grandmothers) and to children as inheritors. Cessation of seaweed knowledge may come at a potential cost, as a significant fraction of the population did not transmit their knowledge to others. Our study furthered the interest in providing sophisticated resource management recommendations that consider the relationships of traditional and scientific knowledge of seaweed selection and use in eastern Sorsogon and beyond.

The research and Development trends of Telecommunications of the End of the 20th Century(Present) and the Beginning of the 21st Century(Future) (20세기 말과 21세기 초의 전기통신의 연구개발동향)

  • 조규심
    • Journal of the Korean Professional Engineers Association
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    • v.29 no.2
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    • pp.15-23
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    • 1996
  • With the ever-increasing importance of high-speed information in society as we move towards the 21 st century, telecommunication laboratories of advanced nations are pressing forward with research and development aimed at implementing its W & P(Visual Intelligent and Personal) services and construction of a new network to support them. In legals to the former, based on a long-term view of technological and market trends, those laboratories are researching and developing services that will make possible an effective progression from the development of services that answer to potential needs towards the full-scale implementation of VI & P services. In regards to the latter, these laboratories are responding in a flexible manner to the increasing diversity and disposal of the communications environment by separating the network into a transmission system and a versatile information control/conversion -ion system and laboratories are working at enhancing the performance of both. Within these board aims, the laboratories are currently focusing our attention in three areas : the technology for a high-speed broadband transmission system featuring optical frequency multiplexing and ATM techniques, network and software technologies for advanced information control and conversion, and technology for constructing a new access network that can provide a comprehensive range of multimedia services. This article describes the laboratories' concept of how VI & P services will develop in the future, and the latest trends in the field of communications. It also describes the ideal configuration of the new network and discusses the important technological aspects of how it is to be constructed. Finally, it presents the results of the laboratories'recent research which include some innovative work, point out the areas requiring future investigation.

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Mobility Support Scheme Based on Machine Learning in Industrial Wireless Sensor Network (산업용 무선 센서 네트워크에서의 기계학습 기반 이동성 지원 방안)

  • Kim, Sangdae;Kim, Cheonyong;Cho, Hyunchong;Jung, Kwansoo;Oh, Seungmin
    • KIPS Transactions on Computer and Communication Systems
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    • v.9 no.11
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    • pp.256-264
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    • 2020
  • Industrial Wireless Sensor Networks (IWSNs) is exploited to achieve various objectives such as improving productivity and reducing cost in the diversity of industrial application, and it has requirements such as low-delay and high reliability packet transmission. To accomplish the requirement, the network manager performs graph construction and resource allocation about network topology, and determines the transmission cycle and path of each node in advance. However, this network management scheme cannot treat mobile devices that cause continuous topology changes because graph reconstruction and resource reallocation should be performed as network topology changes. That is, despite the growing need of mobile devices in many industries, existing scheme cannot adequately respond to path failure caused by movement of mobile device and packet loss in the process of path recovery. To solve this problem, a network management scheme is required to prevent packet loss caused by mobile devices. Thus, we analyse the location and movement cycle of mobile devices over time using machine learning for predicting the mobility pattern. In the proposed scheme, the network manager could prevent the problems caused by mobile devices through performing graph construction and resource allocation for the predicted network topology based on the movement pattern. Performance evaluation results show a prediction rate of about 86% compared with actual movement pattern, and a higher packet delivery ratio and a lower resource share compared to existing scheme.

Performance Analysis of Multicarrier Code Selection CDMA System for PAPR Reduction in Multipath Fading Channel (PAPR을 줄이기 위한 Multicarrier Code Select CDMA시스템의 다중 경로 페이딩 채널에서 성능 분석)

  • Ryu Kwan Woong;Park Yong Wan;Hong Een Kee;Kim Myovng Jin
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.29 no.12A
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    • pp.1319-1332
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    • 2004
  • Multicarrier direct sequence code-division multiple access CDMA(MC DS-CDMA) is an attractive technique for achieving high data rate transmission even if the potentially large peak-to-average power ratio(PAPR) is an important factor for its application. On the other hand, code select CDMA(CS-CDMA) is an attractive technique with constant amplitude transmission of multicode signal irregardless of subchannels by introducing code selection method. In this paper we propose a new multiple access scheme based on the combination of MC DS-CDMA and CS-CDMA. Proposed scheme, which we called MC CS-CDMA, includes the sutclasses of MC DS-CDMA and CS-CDMA as special cases. The performance of this system is investigated for multipath Sequency selective fading channel and maximal ratio combining with rake receiver. In addition the PAPR of proposed system is compare with that of both MC BS-CDMA and CS-CDMA. Simulation results show that proposed system improves PAPR reduction than MC DS-CDMA at the expense of the complexity of receiver and the number of available non. Also, the numerical result shows that the proposed system is better performance than MC DS-CDMA due to the increasing processing gain and the number of time diversity gain.

From Volunteering to Collaboration, and from Transmission to Learning: Interpreting Science Teachers' Learning Experiences in Interculturalism through International Development Cooperation (봉사에서 협력으로, 전달에서 학습으로 -과학교사의 국제개발협력사업 참여를 통한 상호문화주의 학습 경험 해석-)

  • Hwang, Seyoung
    • Journal of The Korean Association For Science Education
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    • v.41 no.5
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    • pp.429-440
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    • 2021
  • In this article, we explored the value of interculturalism in developing the discourses of international cooperation in science education. By doing so, we interviewed four teachers who had an experience in teaching science in developing countries, and analyzed their experiences and perceptions in the lens of interculturalism and dialogue. Our analysis of teacher narratives shows the transition in the teachers' perspectives from volunteering and transmission to collaboration and learning. The transition from volunteering to collaboration occurred as the teachers learned how to meet 'the others' as themselves being strangers in the foreign context. Through intervening and colliding, teachers were able to reposition their identities as teachers. Furthermore, their science teaching practices show how the teachers tried to negotiate between the universal or idealistic value of science education and the heterogeneities formed by the country's cultural and specific situation of science education. Through these experiences, the teachers began to understand the importance of the culturally specific 'need' for science education. In conclusion, we proposed a discourse of science education collaboration based on interculturalism in terms of the diversity and complexity of science education practices in developing countries, teacher professionalism, culturally relevant pedagogy and sustainable policy.

Performance Analysis of MC/DS-CDMA System with Smart Antenna (기지국용 스마트 안테나를 적용한 MC/DS-CDMA 시스템의 성능분석)

  • 박인규;김백현;신승훈;곽경섭
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.27 no.4B
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    • pp.291-297
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    • 2002
  • Due to the increasing demand for high data multimedia service, there has been progressing study of adaptive smart antenna to increase both the performance and capacity using limited wireless resource. IS-95 scheme in the origin of cdma2000 of IMT-2000 standard uses signals of spreading and Walsh-Orthogonal Modulation in reverse link. But, in the case of reverse lint there exists difficulty in synchronous of signals transmitted from users. Therefore, orthogonality between users is not satisfied. So, asynchronous MC-CDMA scheme may yield low performance. In this paper, MC/DS-CDMA scheme to reverse link transmission in adaptive array antenna environment is proposed for spreading the S/P-converted data streams using a given spreading code. Due to frequency diversity effect, simulation results show that the proposed system provides improved BER performance and narrow band interference supple psi on.