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Genetic Variation of Rhododendron micranthum Based on AFLP and RAPD Analysis (AFLP와 RAPD 방법을 이용한 꼬리진달래(Rhododendron micranthum) 수집종의 유전적 변이 분석)

  • 김남수;김진홍;이주경;김남희;이명숙;이재선;박철호
    • Korean Journal of Plant Resources
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    • v.17 no.3
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    • pp.227-238
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    • 2004
  • Rhododendron micranthum is an endangered species in Korea. In order to develop the strategy of gene diversity conservation, estimation of the amount of genetic diversity, the genetic variation and relationship in the native populations of Rh. micranthum was performed on the basis of AFLP and RAPD analysis. Analysis of 56 accessions derived from 6 populations of Rh. micranthum with four AFLP primer combinations and ten RAPD primers detected a total of 33 polymorphic AFLP fragments and 15 polymorphic RAPD fragments, respectively. By UPGMA cluster analysis with molecular markers, the 56 accessions were grouped into three major clusters at 73.3% genetic similarity; group I consists of most accessions of populations I, II, IV, V and Ⅵ, group II consists of 7 accessions of population III, and group III consists of only two accessions of population IV. The geographic locations of the most accessions derived from six populations were not related to their position in the UPGMA cluster analysis, except for several accessions of populations III and IV. The genetic similarity of among six populations measured by AFLP and RAPD markers ranged from 0.66 to 0.99. Among them, population Ⅵ showed the highest GS with means of 0.87, while population I showed the lowest GS with means of 0.78. This result will be useful for designing the strategy of conservation in the native populations of Rh. micranthum.

Effect of Wet Cold and Gibberellin Treatments on Germination of Dwarf Stone Pine Seeds (저온습윤 및 지베렐린 처리가 눈잣나무의 종자발아에 미치는 영향)

  • Lim, Hyo-In;Kim, Gil-Nam;Jang, Kyung-Hwan;Park, Wan-Geun
    • Korean Journal of Plant Resources
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    • v.28 no.2
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    • pp.253-258
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    • 2015
  • In South Korea, Pinus pumila (Pall.) Regel (dwarf stone pine) has been designated as a critically endangered species by the Korea Forest Service. We have difficulties in obtaining the seeds of P. pumila because P. pumila grows only in the Daecheongbong area (1550–1700 m above sea level) of Mt. Seorak and almost all of its cones are damaged by birds and rodents. For establishing an ex situ conservation stand of P. pumila, this study was conducted to figure out the effects of wet cold (cold stratification, prechilling) and GA3 treatment on the germination of P. pumila seeds. After cold stratification (1, 2, 3, 4, 5 months), prechilling (1, 2, 3, 4, 5 months) and GA3 treatment (0, 100, 500, 1,000, 2,000, 3,000 ㎎/L), seeds were placed on petri-dishes at 25℃ under light condition. The percentage of germination, mean germination time and the germination rate were investigated. The results showed that both of the cold stratification and prechilling were effective in improving germination performances. However, there were no significant differences in performances between the two cold treatments. Within each treatment, the germination performances improved with the period of treatment. However, after three months of treatment, the performances showed no significant improvement. The gibberellin treatment was also effective in improving seed germination of P. pumila. The percentage of germination reached 79.0% in the seeds treated with 100 ㎎/L of GA3. However, the germination performances decreased at high concentration of GA3 treatments (over 2000 ㎎/L). In conclusion, cold stratification (over 3 months) or 100 ㎎/L of GA3 treatment was considered to be the appropriate method for seedling production of P. pumila.

Effects of Different NaCl Concentrations on the Growth of Suaedu asparagoides, Suaeda maritima, and Salicornia herbacea (염분농도에 따른 나문재, 해홍나물, 퉁퉁마디의 생장반응)

  • Nam, Yu-Kyeong;Baik, Jung-Ae;Chiang, Mae-Hee
    • Korean Journal of Soil Science and Fertilizer
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    • v.40 no.5
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    • pp.349-353
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    • 2007
  • To investigate the effect of NaCl concentration on plant growth in three halophytes, Suaeda asparagoides, Suaeda maritima, and Salicornia herbacea, and to select afforestation species for reclaimed land along the shore, this experiment was conducted by ebb and flow system added fertilize of 1/2 Hoagland solution and halophytes were cultured for 4 month treated by 0, 50, 200, 400 mM NaCl, respectively. The shoot height was increased with 0 and 50 mM NaCl treatment of Suaeda asparagoides and Suaeda maritima and decreased with 200, 400 mM NaCl treatment, whereas them of Salicornia herbacea was increased by 200 mM NaCl treatment. The higher NaCl concentrations, the lower fresh and dry weight in Suaeda asparagoides. In case Suaeda maritima and Salicornia herbacea, fresh and dry weight was increased by 200 mM NaCl treatment. The higher NaCl concentrations, the lower chlorophyll contents in shoot of all treatment. The proline contents of 400 mM treatment in Suaeda maritima was higher than them of other treatments. The shoot water potential was generally lower in 50mM as compared to the control in Suaeda asparagoides, Suaeda maritima, significantly.

Descriptions of Four New Species of Predatory Nematodes (Mononchida) From Korea (韓國産 捕食線蟲(Mononchida: Nematoda)의 4 新種 기재)

  • Choi, Young-Eoun;Khan, Zakaullah;Lee, Sung-Min
    • The Korean Journal of Soil Zoology
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    • v.4 no.2
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    • pp.89-100
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    • 1999
  • Four new and a known spacies of the order Mononchida were described and illustrated. Iotonchus obtusus sp. n. was 2.8 mm long, a=33, b=4.2, c=61, V=68%, buccal cavity=61${\times}$45 mm, and is characterized by having basally situated dorsal tooth, presence of vulval papillae and in having short, hemispherical tail with thick cuticle at terminus. Miconchus vulvapapillatum sp. . was 2.7-3.6 mm long, a=29-36, b=4.1-4.5, c=18.4-21, V=65-69%, buccal cavity=53-61${\times}$29-33 mm, spicules=132-137 mm, ventromedian supplements 28-31, and was characterized by having 5-8 pre- and post vulval papillae in contiguous series, and three pairs of vulval glands. Clarkus koreanus sp. n. was 1.1-1.3 mm long, a=27.5-28.8, b=3.5-3.9, c=12-14.5, V=60-64%, buccal cavity=24-28${\times}$13.5-15 mm, and was characterized by well offset lip region, amphids situated well below to dorsal tooth apex, and vulva elevated, with vulval flap. Coomansus ulsani sp. n. was 1.2-1.5 mm long, a=23.5-26, b=3.4-3.8, c=13.6-14.8, V=65-68%, buccal cavity=36-39${\times}$21-23 mm and was characterized by well offset lip region and a thin longitudinal ridge on vertical walls of stoma.

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Scientific Analysis and Conservation of Waterlogged Woods Excavated from Suyoeng-ri Site, Hwaseong, Korea (화성 수영리 유적 출토 수침목제유물의 과학적 분석 및 보존처리)

  • Lee, Kwang-Hee;Oh, Jeong-Eun;Kim, Soo-Chul
    • Journal of Conservation Science
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    • v.37 no.5
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    • pp.579-589
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    • 2021
  • Five waterlogged wood artefacts were excavated from Suyeong-ri site in Hwaseong, South Korea. The aim of the present study was to identify the species and estimate the date of manufacture and the manufacturing method of these artefacts. The study also aimed to conserve the original shapes of waterlogged wood artefacts by using the vacuum freeze drying method. The two large waterlogged woods were identified as Ulmus spp. and Morus spp., whereas one of the three small waterlogged woods was identified as Abies spp. and the other two as hard pine. Radiocarbon dating using wiggle match dated the manufacturing of these wooden artefacts between BCE 8520-8490 or BCE 8470-8290 in the Neolithic age, and a similar period was also confirmed for seed excavated from a place close to the location where the waterlogged wood artefacts were excavated. The surface of waterlogged wood artefacts had several traces of manufacturing processes - traces of tearing and chopping - were observed. Based on these observations, it was confirmed that stone adz was used to make these wooden artefacts. Thereafter, the waterlogged wood samples were conserved by immersing them into PEG#4,000 of concentration in water from 10% to 40% at room temperature(15~25℃) and subjecting them to vacuum freeze drying. However, the internal moisture was not completely removed in some thick parts of waterlogged woods by applying the general schedule such as raising the shelf temperature as the surface temperature rises. Therefore, additional study is required using the schedule-method for vacuum freeze drying of large waterlogged wood.

Study on the Characteristics of Materials and Production Techniques of Clay Seated Vairocana Buddha Triad of Seonunsa Temple, Gochang (보물 제1752호 고창 선운사 소조비로자나삼불좌상 재질특성 및 제작기법 연구(1): 소조불상 주요 구성재료 분석)

  • Lee, Hwa Soo;Lee, Han Hyoung;Han, Gyu-Seong
    • Journal of Conservation Science
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    • v.36 no.6
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    • pp.562-577
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    • 2020
  • In this study, to conserve the clay seated Vairocana Buddha triad in Seonunsa temple, Gochang (Treasure 1752), the primary materials employed for creating the clay Buddha statues were scientifically analyzed. By analyzing the soil layer constituting the Buddha statues, it is observed that the said layer comprises sand having particle size greater than that of medium sand and soil having particle size smaller than that of fine sand, which were used in a ratio of 7:3, along with the bast fibers of paper mulberry (Broussonetia kazinoki). Hence, the aforementioned soil layer is composed of a mixture of sand and weathered soil, along with bast fibers to prevent scattering. By analyzing the tree species, it is found that the wooden materials constituting the bottom board and the interior of Buddha's sleeves of the Amitabha Buddha statue, Vairocana Buddha statue, and Medicine Buddha statue are hard pines (Pinus spp.). Additionally, three layers are found in the cross section of the gold layer. Furthermore, each of the hair sections of the Buddha statues is composed of earthy materials such as quartz, albite, microcline, mica, and magnetite, and the hair surface was painted by incorporating black materials containing magnetite.

Analysis of Soil Fungal Community Related to Rhododendron mucronulatum in Biseul Mountain County Park, South Korea (우리나라 비슬산군립공원 진달래나무(Rhododendron mucronulatum)와 관련된 토양 진균 군집의 pyrosequencing 분석)

  • Jeong, Min-Ji;Kim, Dong-Hyun;Choi, Doo-Ho;Lee, In-Seon;Kim, Jong-Guk
    • Journal of Life Science
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    • v.31 no.4
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    • pp.377-384
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    • 2021
  • Researching the soil fungal community is important to understand the interaction between fungi and living plants. However, too few studies have examined the soil fungal community and their interactions with plants. Rhododendron mucronulatum, commonly known as Korean rosebay, is an important forest resource that has aesthetic, ecological, and potential pharmacological values. We used a pyrosequencing method to analyze the characteristics of fungal communities from R. mucronulatum soil samples from Biseul mountain county park, which is one of the famous places for large R. mucronulatum colonies in South Korea. We collected soil core samples in February and August at three sites in the Biseul Mountain County Park, taking into consideration the regional and seasonal conditions. We obtained 454,157 validated reads after pyrosequencing all six samples. The fungal communities from the first observation spot in August had the richest species diversity among the samples. Basidiomycota, Ascomycota, and Mortierellomycota were major phyla in the samples. Agaricales_f, Mortierellaceae, and Clavariaceae were major families in the samples. The genus Mortierella was the most dominant in all six samples. Overall, 19 genera could be associated with R. mucronulatum. Sample 1 had 109 genera in sample 1, sample 2 had 111 genera, and sample 3 had 112 genera that were uniquely identified. The samples collected in August had 28 identified genera, that existed only in summer samples, indicating a weather effect. This study can be used as basic research to understand the relationship between soil fungi and plants.

Identification of genes involved in inbreeding depression of reproduction in Langshan chickens

  • Xue, Qian;Li, Guohui;Cao, Yuxia;Yin, Jianmei;Zhu, Yunfen;Zhang, Huiyong;Zhou, Chenghao;Shen, Haiyu;Dou, Xinhong;Su, Yijun;Wang, Kehua;Zou, Jianmin;Han, Wei
    • Animal Bioscience
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    • v.34 no.6
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    • pp.975-984
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    • 2021
  • Objective: Inbreeding depression of reproduction is a major concern in the conservation of native chicken genetic resources. Here, based on the successful development of strongly inbred (Sinb) and weakly inbred (Winb) Langshan chickens, we aimed to evaluate inbreeding effects on reproductive traits and identify candidate genes involved in inbreeding depression of reproduction in Langshan chickens. Methods: A two-sample t-test was performed to estimate the differences in phenotypic values of reproductive traits between Sinb and Winb chicken groups. Three healthy chickens with reproductive trait values around the group mean values were selected from each of the groups. Differences in ovarian and hypothalamus transcriptomes between the two groups of chickens were analyzed by RNA sequencing (RNA-Seq). Results: The Sinb chicken group showed an obvious inbreeding depression in reproduction, especially for traits of age at the first egg and egg number at 300 days (p<0.01). Furthermore, 68 and 618 differentially expressed genes (DEGs) were obtained in the hypothalamus and ovary between the two chicken groups, respectively. In the hypothalamus, DEGs were mainly enriched in the pathways related to vitamin metabolism, signal transduction and development of the reproductive system, such as the riboflavin metabolism, Wnt signaling pathway, extracellular matrix-receptor interaction and focal adhesion pathways, including stimulated by retinoic acid 6, serpin family F member 1, secreted frizzled related protein 2, Wnt family member 6, and frizzled class receptor 4 genes. In the ovary, DEGs were significantly enriched in pathways associated with basic metabolism, including amino acid metabolism, oxidative phosphorylation, and glycosaminoglycan degradation. A series of key DEGs involved in folate biosynthesis (gamma-glutamyl hydrolase, guanosine triphosphate cyclohydrolase 1), oocyte meiosis and ovarian function (cytoplasmic polyadenylation element binding protein 1, structural maintenance of chromosomes 1B, and speedy/RINGO cell cycle regulator family member A), spermatogenesis and male fertility (prostaglandin D2 synthase 21 kDa), Mov10 RISC complex RNA helicase like 1, and deuterosome assembly protein 1) were identified, and these may play important roles in inbreeding depression in reproduction. Conclusion: The results improve our understanding of the regulatory mechanisms underlying inbreeding depression in chicken reproduction and provide a theoretical basis for the conservation of species resources.

Fish Farm Monitoring and Growth Performances of Chinese Muddy Loach (Misgurnus mizolepis) under Indoor or Outdoor Aquaculture Conditions, Korea (실내외 양식환경에 따른 미꾸라지(Misgurnus mizolepis) 양식장 모니터링과 성장특성)

  • Choi, Bok Ki;Choe, Jong Ryeol;Lee, Jeong-Ho;Park, Jong Sung;Kim, Jung Eun;Hwang, Ju-ae;Kim, Hyeong Su
    • Korean Journal of Ichthyology
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    • v.32 no.4
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    • pp.232-238
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    • 2020
  • The objective of the present study was to investigate fish farm and growth performances of Chinese muddy loach (Misgurnus mizolepis) under indoor and outdoor aquaculture conditions for the domestic loach aquaculture industry. The investigation was conducted from August 2017 to October 2019 at one indoor farm (D-site) and two outdoor farms (P1-site and P2-site). Results showed that WG (weight gain), DWG (daily weight gain), and SWG (specific weight gain) based on growth measurements were 175.27±36.2%, 7.98±3.3%, and 0.94±0.2% at D-site, 320±34%, 4.07±0.6%, and 0.55±0.1% at P1-site, and 295.9±53%, 4.15±0.5%, and 0.62±0.1% at P2-site, respectively. WG was higher in outdoor farms (P1-site and P2-site), while DWG and SWG were higher in the indoor farm (D-site). Such differences of the present study might be due to differences in growth, water quality, plant and sale frequency depending on aquaculture types. In particular, outdoor farms takes more than a year to have sales whereas indoor farms can have sales three times in a year.

Effects of Nitrogen Fertilization on Growth of Populus sibirica and Ulmus pumila Seedlings and Soil Properties in a Semi-Arid Area, Mongolia (몽골 반건조지에서 질소 시비가 백양나무와 비술나무 묘목의 생장 및 토양 특성에 미치는 영향)

  • Chang, Hanna;Han, Seung Hyun;Kim, Seongjun;Park, Min Ji;An, Jiae;Kang, Hoduck;Yi, Myong-Jong;Akhmadi, Khaulenbek;Son, Yowhan
    • Journal of Climate Change Research
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    • v.6 no.3
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    • pp.249-256
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    • 2015
  • This study was conducted to investigate the effects of different levels and types of nitrogen fertilizer on seedlings and soil chemical properties in a semi-arid area, Mongolia. 2-year-old Populus sibirica and 4-year-old Ulmus pumila seedlings were planted in May 2014. Six treatments with three levels of nitrogen (low-level: urea $5g\;tree^{-1}$; medium-level: urea $15g\;tree^{-1}$, ammonium sulfate $33g\;tree^{-1}$, urea $15g\;tree^{-1}$ with potassium phosphate $10g\;tree^{-1}$; high-level: urea $30g\;tree^{-1}$) were applied and for the medium-level of nitrogen, different types of fertilizer were treated. Survival rate, root collar diameter (RCD) growth rate, leaf nitrogen concentration of seedlings, and soil chemical properties were determined in August 2014. The seedling survival rate of both species decreased as the level of nitrogen increased. This result can be explained by water stress caused by nitrogen fertilization in arid regions. The RCD growth rate of P. sibirica was significantly decreased by the treatment of high-level of nitrogen due to excessive nitrogen fertilization, and was increased by the treatment of ammonium sulfate due to sulfur which might promote nitrogen uptake. The leaf nitrogen concentration of P. sibirica did not change by the treatment of low-level of nitrogen, and was increased by the treatment of medium-level of nitrogen. There were no significant differences in the RCD growth rate and the leaf nitrogen concentration of U. pumila among the six treatments. None of soil chemical properties was affected by nitrogen fertilization. Overall, the low-level of nitrogen showed no effect on seedlings and soil chemical properties, except on survival rate of U. pumila and the high-level of nitrogen was considered excessive fertilization. Continuous monitoring of medium-level nitrogen fertilization including the ammonium sulfate, which increased early growth of seedlings, would be needed to elucidate the effect of fertilization on seedling growth and soil properties in a semi-arid region.