• Title/Summary/Keyword: restriction mapping

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Characterization of Tetracycline Resistance Plesmid of Multidrug-resistant Staphylococcus aureus (다제내성 황색포도상구균이 가지고 있는 테트라사이클린 내성 플라스미드의 동정)

  • 이대운;문경호
    • YAKHAK HOEJI
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    • v.39 no.1
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    • pp.6-9
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    • 1995
  • The clinical isolate Staphylococcus aureus SA2 had four kinds of plasmids and was resistant to ampicillin, chloramphenicol, clindamycin, erythromycin, gentamicin, kanamycin, methicillin, streptomycin, tetracycline and tobramycin. Transformation experiment demonstrated that 4.44 kb plasmid(pKH6) encoded resistance to tetracycline. The cleavage map of pKH6 was determined by restriction enzyme mapping techniques. The cleavage map is given for EcoRV, HindIII, HpaI, HpaII, KpnI and Xbal. Restriction endonucleases BamHl, BglI, BGIII, BstEII, EcoRI, HaellI, PstI, PvuII, SalI, Smal, and Xhol have no site on this plasmid. The restriction map revealed extensive structural homology between pKH6 and pT181.

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Subcloning of Nodulin 26 Wild Type(S262) and Phosphorylation Site Mutant(S262D) into the Yeast Expression Vector pYES2

  • Cha, Youn-Soo
    • Preventive Nutrition and Food Science
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    • v.2 no.1
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    • pp.61-65
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    • 1997
  • Wild type nodulin 26(nod 26) cDNA(S262) and phodphorylation aite mutant(S262D) were constructed by a yeast expression system using pYES2 plasmids(pTES2-D262 and pTES2-S262D) were sc-reened by restriction mapping with BamHI of KpnI. S262 nod 26 contained a sreine residue at position 262 and S262D nod 26 contained the substitution mutation of serine to aspartic acid residue at position 262 were verified by automated floursent DNA sequencing.

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Ontology Mapping using Semantic Relationship Set of the WordNet (워드넷의 의미 관계 집합을 이용한 온톨로지 매핑)

  • Kwak, Jung-Ae;Yong, Hwan-Seung
    • Journal of KIISE:Databases
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    • v.36 no.6
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    • pp.466-475
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    • 2009
  • Considerable research in the field of ontology mapping has been done when information sharing and reuse becomes necessary by a variety of ontology development. Ontology mapping method consists of the lexical, structural, instance, and logical inference similarity computing. Lexical similarity computing used in most ontology mapping methods performs an ontology mapping by using the synonym set defined in the WordNet. In this paper, we define the Super Word Set including the hypenym, hyponym, holonym, and meronym set and propose an ontology mapping method using the Super Word Set. The results of experiments show that our method improves the performance by up to 12%, compared with previous ontology mapping method.

DISTANCE-PRESERVING MAPPINGS ON RESTRICTED DOMAINS

  • Jung, Soon-Mo;Lee, Ki-Suk
    • The Pure and Applied Mathematics
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    • v.10 no.3
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    • pp.193-198
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    • 2003
  • Let X and Y be n-dimensional Euclidean spaces with $n\;{\geq}\;3$. In this paper, we generalize a classical theorem of Bookman and Quarles by proving that if a mapping, from a half space of X into Y, preserves a distance $\rho$, then the restriction of f to a subset of the half space is an isometry.

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Restriction Mapping of Cloned Pullulanase Gene and Property of Pullulanase Produced in Escherichia coli (pYKL451) and Klebsiella pneumoniae NFB-320 (Klebsiella pneumoniae NFB-320의 Pullulanase 유전자의 제한효소 분석과 효소학적 특성)

  • Yu, Ju-Hyun;Chung, Kun-Sub;Kong, In-Su;Lee, Jung-Kee
    • Microbiology and Biotechnology Letters
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    • v.15 no.6
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    • pp.436-440
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    • 1987
  • Pullulanase gene (pul) of Klebsiella pneumoniae NFB-320 which was cloned previously in Escherichia coli with plasmid pBR322. The gene was analyzed with various restriction enzymes. The cloned gene was contained within n 10 kb BamHI DNA fragment. We constructed the restriction map of the hybrid plasmid pYKL451. The optimum temperatures for pullulanases produced in E. coli (pYKL451) and K. pneumoniae NFB-320 were almost the same, 50-55 $^{\circ}C$. The optimum pHs for the reaction of the enzymes produced by E. coli (pYKL451) and K. pneumoniae NFB-320 was 6.0. Both enzyme preparations were stable under the range of pH 5.0 to 10.0 when those were kept at 40 $^{\circ}C$ for 90 min and were stable until 40 $^{\circ}C$ when allowed to stand for 1hr at various temperatures.

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The Characterization of Mitochondrial DNA of Korean Ginseng (Panax ginseng C.A. Meyer) (고려인삼의 미토콘드리아 DNA의 분자생물학적 특성연구)

  • Lim, Yong-Pyo;Park, Kwang-Tae
    • Journal of Ginseng Research
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    • v.14 no.2
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    • pp.310-316
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    • 1990
  • This study was focused on the characterization of mitochondrial DNA (mtDNA) for molecular 9enetical approach of energy Production related mechanism in Panax ginseng. The simple and efficient method of mtDNA isolation from ginseng has been developed by modification of recently advanced methods. This procedure can successfully apply to mtDNA isolation of several plants. mtDNA of etiolated shoot and one-year root were digested with restriction endonucleases, but that of 6-year root not. Any difference was not observed in the restriction endonuclease digestion patterns among the ginseng variants. Molecular size of ginseng mtDNA was estimated at least 159 kb by the restriction endonuclease fragment analysis. The 4.5 kb extra band at the lane of EcoRII treatment could be observed in restriction patterns digested with the methylation sensitive endonucleases, BstN I and EcoRII. For construction of mitochondrial genomic library of ginseng, mtDNA was partially digested with EcoRl, and packaged with EMBL4 phage vector. Genomic library was screened and purified for further research including restriction mapping of ginseng mtDNA, and cloning of the genes. The gene of ATP synthase A subunit was cloned from the purified EMBL4 library clone No. 16. Now, clone No. 16 is subcloned for structure gene sequence analysis.

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Characterization of Chloramphenicol Resistant Plasmid of Multidrug-resistant Staphylococcus aureus (다제내성 황색포도상구균이 가지고 있는 클로람페니콜 내성 플라스미드의 동정)

  • 이대운;문경호
    • YAKHAK HOEJI
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    • v.37 no.6
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    • pp.621-624
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    • 1993
  • The clirical isolate Staphylococcus aureus SA2 had four kinds of plasmids and was resistant to ampicillin, chloroamphenicol, clindamycin. erythromycin, gentamicin, kanamycin, methicillin, streptomycin, tetracycline and tobramycin. Transformation experiment demonstrated that 4.14kb plasmid(pKH7) encoded resistance to chloramphenicol. The cleavage map of pKH7 was determined by restriction enzyme mapping techniques. The cleavage map is given for BstEll, Hindlll, Hpall, and Xbal. The above restriction endonucleases have a single site, but nucleases BamHl, Bgll, BglII, EcoRl, EcoRV, HaeIII, Hpal, Kpnl, Pstl, PvnII, Sall, Smal, and XhoI have no site on this plasmid.

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Restriction endonuclease mapping of the plasmid pTi12 from agrobacterium tumefaciens (Agrobacterium tumefaciens KU-12 균주에서 분리한 플라스미드 pTi 12의 제한효소 지도)

  • 이용욱;손정훈;심웅섭
    • Korean Journal of Microbiology
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    • v.25 no.3
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    • pp.173-179
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    • 1987
  • Ti plasmids were isolated from three strains of Agrobacterium tumefaciens in Korea and their types and molecular weights were determined. All of these are octopine-type and their molecular weights are 44Kb (pTi 12), 180Kb (pTi 14) and 172Kb (pti 49), respectively. In order to construct physical map of pTi 12, pTi 12 was digested with restriction endonucleases Sma I and Hind III. Sma I degestion of pTi 12 produce 8 fragments and Hind III produced 10 fragments. Physical arrangements of these fragments was determined by Southern hybridization techniques.

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The Effects of Positive Experience about Science of High School Students in an Inquiry Experiment Class on Restriction Enzyme Mapping in Biotechnology Chapter (생명공학 단원의 제한 효소 지도 작성 탐구실험 수업이 고등학생의 과학긍정경험에 미치는 영향)

  • Soo Yeon Jeong;Jeong Ho Chang
    • Journal of Science Education
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    • v.46 no.3
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    • pp.293-311
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    • 2022
  • In this study, a restriction enzyme mapping inquiry experiment was developed for cultivating basic knowledge on molecular biology and the effects on inquiry experiment ability and positive experience on science through student-centered molecular biology inquiry experiment class for second graders of a general high school was analyzed. First of all, it was found that the experimental class through the inquiry experiment was significantly effective as the percentage of high school students who answered 'yes' or higher in the positive science experience of general high school students was higher after than before the test. As a result of developing and applying a series of five classes for the creation of restriction enzyme maps, not only did the students' interest in science studies, but also their class participation increased. They were also used as effective specific science learning motives, science career aspirations and experience data. The science environment of the inquiry experiment class led to the improvement of students' learning attitudes and positive science experience, which had a positive effect on the importance of class concentration and class quality, active communication and mutual cooperation among students. In addition, inquiry and experiment classes will provide opportunities for career experience, which will become the foundation for cultivating basic knowledge on molecular biology and advancing to science and engineering.