• 한국환경과학회지
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• 제14권4호
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• pp.367-371
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• 2005

Soil samples were collected from new-developed wetland soil ecosystem of Tamarix chinesis plantation in Chinese Yellow River Delta in different months of 2003. Soil characteristics, temporal change and spatial distribution of microbial community composition and their relationship with nitrogen turnover and circling were investigated in order to analyze and characterize the role of microbial diversity and functioning in the specific soil ecosystem. The result showed that the total population of microbial community in the studied soil was considerably low, compared with common natural ecosystem. The amount of microorganism followed as the order: bacteria> actinomycetes>fungi. Amount of actinomycetes were higher by far than that of fungi. Microbial population remarkably varied in different months. Microbial population of three species in top horizon was corrected to that in deep horizon. Obvious rhizosphere effect was observed and microbial population was significantly higher in rhizosphere than other soils due to vegetation growth, root exudation, and cumulative dead fine roots. Our results demonstrate that microbial diversity is low, while is dominated by specific community in the wetland ecosystem of Tamarix chinesi.

• Journal of Microbiology and Biotechnology
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• 제31권6호
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• pp.765-774
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• 2021

Although research on the osteal signaling pathway has progressed, understanding of gut microbial-dependent signaling pathways for metabolic and immune bone homeostasis remains elusive. In recent years, the study of gut microbiota has shed light on our understanding of bone homeostasis. Here, we review microbiota-mediated gut-bone crosstalk via bone morphogenetic protein/SMADs, Wnt and OPG/receptor activator of nuclear factor-kappa B ligand signaling pathways in direct (translocation) and indirect (metabolite) manners. The mechanisms underlying gut microbiota involvement in these signaling pathways are relevant in immune responses, secretion of hormones, fate of osteoblasts and osteoclasts and absorption of calcium. Collectively, we propose a signaling network for maintaining a dynamic homeostasis between the skeletal system and the gut ecosystem. Additionally, the role of gut microbial improvement by dietary intervention in osteal signaling pathways has also been elucidated. This review provides unique resources from the gut microbial perspective for the discovery of new strategies for further improving treatment of bone diseases by increasing the abundance of targeted gut microbiota.

• Ocean and Polar Research
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• 제29권4호
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• pp.327-337
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• 2007

Plankton communities have close relationships with environmental changes in water columns. Thus, the use of plankton as a biological tool for assessing the marine ecosystem health may be effective. Major issue regarding coastal pollution has been usually recognized as phytoplankton blooms or red tides caused by the eutrophication, an increase in concentration of inorganic nutrients such as nitrogen and phosphorus. However, in order to understand the effects of the overall pollution on marine ecosystem, the organic pollutants as well as the inorganic nutrients should be also considered. For understanding the effects of the organic pollution, among the planktonic organisms, heterotrophic bacteria, heterotrophic flagellates and ciliates should be investigated. Generally, there are three approaches for assessing the marine ecosystem health using the plankton taxa or plankton communities. The first one is a community-based approach such as diversity index and chlorophyll a concentration which are common in analysis of the plankton communities. The second is an indiviual-based approach which is to monitor the pollution indicative species. This approach needs one's ability to identify the plankton to species level. The last approach is a bioassay of toxicity, which can be applied to the plankton. A pilot study in Masan Bay was conducted to assess the effects of the inorganic and organic pollution. In this article, a new approach using plankton communities was tentatively presented as a biological tool for assessing the ecosystem health of Masan Bay.

• Journal of Microbiology and Biotechnology
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• 제26권9호
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• pp.1593-1604
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• 2016

Recently, bacterial quorum quenching (QQ) has been proven to have potential as an innovative approach for biofouling control in membrane bioreactors (MBRs) for advanced wastewater treatment. Although information regarding the microbial community is crucial for the development of QQ strategies, little information exists on the microbial ecology in QQ-MBRs. In this study, the microbial communities of biofilm were investigated in relation to the effect of QQ on anoxic/oxic MBRs. Two laboratory-scale MBRs were operated with and without QQ-beads (QQ-bacteria entrapped in beads). The transmembrane pressure increase in the QQ-MBRs was delayed by approximately 100-110% compared with conventional- and vacant-MBRs (beads without QQ-bacteria) at 45 kPa. In terms of the microbial community, QQ gradually favored the development of a diverse and even community. QQ had an effect on both the bacterial composition and change rate of the bacterial composition. Proteobacteria and Bacteroidetes were the most dominant phyla in the biofilm, and the average relative composition of Proteobacteria was low in the QQ-MBR. Thiothrix sp. was the dominant bacterium in the biofilm. The relative composition of Thiothrix sp. was low in the QQ-MBR. These findings provide useful information that can inform the development of a new QQ strategy.

• Asian-Australasian Journal of Animal Sciences
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• 제12권1호
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• pp.84-92
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• 1999

The rumen microbial ecosystem is coming to be recognized as a rich alternative source of genes for industrially useful enzymes. Recent advances in biotechnology are enabling development of novel strategies for effective delivery and enhancement of these gene products. One particularly promising avenue for industrial application of rumen enzymes is as feed supplements for nonruminant and ruminant animal diets. Increasing competition in the livestock industry has forced producers to cut costs by adopting new technologies aimed at increasing production efficiency. Cellulases, xylanases, ${\beta}$-glucanases, pectinases, and phytases have been shown to increase the efficiency of feedstuff utilization (e.g., degradation of cellulose, xylan and ${\beta}$-glucan) and to decrease pollutants (e.g., phytic acid). These enzymes enhance the availability of feed components to the animal and eliminate some of their naturally occurring antinutritional effects. In the past, the cost and inconvenience of enzyme production and delivery has hampered widespread application of this promising technology. Over the last decade, however, advances in recombinant DNA technology have significantly improved microbial production systems. Novel strategies for delivery and enhancement of genes and gene products from the rumen include expression of seed proteins, oleosin proteins in canola and transgenic animals secreting digestive enzymes from the pancreas. Thus, the biotechnological framework is in place to achieve substantial improvements in animal production through enzyme supplementation. On the other hand, the rumen ecosystem provides ongoing enrichment and natural selection of microbes adapted to specific conditions, and represents a virtually untapped resource of novel products such as enzymes, detoxificants and antibiotics.

• 미생물학회지
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• 제43권1호
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• pp.40-46
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• 2007

생태계가 파괴된 파로호에 수초대를 복원하는 방법으로 rubberized coconut fiber를 식생기반재로 사용한 인공식물섬을 2003년 8월에 설치하였다. 인공식물섬 식생기반재에서는 식물이 자랄 수 있을 정도로 영양염이 농축되어 꽂창포(Iris ensata), 노랑 꽃창포(Iris pseudoacorus), 갈대(Phragmites communis)등 식재된 식물이 잘 자랐다. 이 과정에서 세균의 역할을 알아보기 위하여 2004년 4월부터 10월까지 2주 간격으로 총세균수, 활성세균수, ${\beta}-glucosidase$, phosphatase를 조사한 결과 인공식물성 식생기반재의 공극수에서 각각 평균 $28.6{\times}10^{6}\;cells/ml,\;22.7{\times}10^{6}\;cells/ml,\;452.9nM/L/hr,\;16381.9nM/L/hr$로 조사되어 파로호 호수물보다 각각 10배, 15배, 22배, 38배 높았다. 그리고 영양염류농도는 총인과 충질소가 식생기반재 공극수에서 각각평균 1.06 mg/L, 12.5 mg/L으로 조사되어 호수물보다 12배, 3배 높았다. 이 결과 인공식물섬 식생기반재에서 새로운 생태계가 만들어졌으며, 이 생태계에서 세균이 중요한 역할을 하여 빈-중영양상태의 호수물에서도 식물이 잘 자랄 수 있었다.

• Journal of Ginseng Research
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• 제41권3호
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• pp.353-360
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• 2017

Background: Endophytic fungi play an important role in balancing the ecosystem and boosting host growth. In the present study, we investigated the endophytic fungal diversity of healthy Panax notoginseng and evaluated its potential antimicrobial activity against five major phytopathogens causing root-rot of P. notoginseng. Methods: A culture-dependent technique, combining morphological and molecular methods, was used to analyze endophytic fungal diversity. A double-layer agar technique was used to challenge the phytopathogens of P. notoginseng. Results: A total of 89 fungi were obtained from the roots, stems, leaves, and seeds of P. notoginseng, and 41 isolates representing different morphotypes were selected for taxonomic characterization. The fungal isolates belonged to Ascomycota (96.6%) and Zygomycota (3.4%). All isolates were classified to 23 genera and an unknown taxon belonging to Sordariomycetes. The number of isolates obtained from different tissues ranged from 12 to 42 for leaves and roots, respectively. The selected endophytic fungal isolates were challenged by the root-rot pathogens Alternaria panax, Fusarium oxysporum, Fusarium solani, Phoma herbarum, and Mycocentrospora acerina. Twenty-six of the 41 isolates (63.4%) exhibited activity against at least one of the pathogens tested. Conclusion: Our results suggested that P. notoginseng harbors diversified endophytic fungi that would provide a basis for the identification of new bioactive compounds, and for effective biocontrol of notoginseng root rot.

• Asian-Australasian Journal of Animal Sciences
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• 제32권8_spc호
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• pp.1321-1330
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• 2019

Recent development of novel techniques in systems biology have been used to improve and manipulate the rumen microbial ecosystem and gain a deeper understanding of its physiological and microbiological interactions and relationships. This provided a deeper insight and understanding of the relationship and interactions between the rumen microbiome and the host animal. New high-throughput techniques have revealed that the dominance of Proteobacteria in the neonatal gut might be derived from the maternal placenta through fetal swallowing of amniotic fluid in utero, which gradually decreases in the reticulum, omasum, and abomasum with increasing age after birth. Multi "omics" technologies have also enhanced rumen fermentation and production efficiency of dairy goats using dietary interventions through greater knowledge of the links between nutrition, metabolism, and the rumen microbiome and their effect in the environment. For example, supplementation of dietary lipid, such as linseed, affects rumen fermentation by favoring the accumulation of ${\alpha}$-linolenic acid biohydrogenation with a high correlation to the relative abundance of Fibrobacteriaceae. This provides greater resolution of the interlinkages among nutritional strategies, rumen microbes, and metabolism of the host animal that can set the foundation for new advancements in ruminant nutrition using multi 'omics' technologies.

• 생태와환경
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• 제41권1호
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• pp.19-25
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• 2008

팔당호에 설치된 인공식물섬 식생기반재 내에서 세균의 생태학적 기능을 파악하기 위하여 식생기반재 내의 공극수와 호숫물에서 총인(TP), 용존인(DIP), 총질소(TN), 질산성질소$(NO_3)$총세균수, 활성세균수와 체외효소활성도를 측정하였다. 인공식물섬 식생기반재의 공극수에서 TN과 $NO_3$농도는 각각 $4.4\sim7.5mg\;L^{-1}$, $1.2\sim3.8mg\;L^{-1}$ 범위로 호숫물보다 약 2배 높게 나타났으며, TP와 DIP값도 식생기반재 공극수에서 각각 $1.4\sim4.1mg\;L^{-1}$, $0.003\sim0.137mg\;L^{-1}$ 범위로 TP 값은 호숫물보다 약 $4\sim25$배, DIP값은 5.3배 높은 값이었다. 총세균수와 활성세균수는 호숫물보다 10배 이상 값을 보였다. 또한 phosphatase 및 $\beta$-glucosidase 활성도도 인공식물섬 공극수에서 호숫물보다 10배 이상의 높은 결과를 보여 식생기반재 내부에서 세균에 의한 영양염류의 농축과 왕성한 유기물질분해가 일어나고, 이 과정에서 수초의 성장, 동물플랑크톤의 증식 등 새로운 수생태계가 조성된 것으로 사료된다.

• Journal of Preventive Medicine and Public Health
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• 제38권2호
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• pp.117-124
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• 2005

Before twentieth centuries and during early twentieth centuries, communicable diseases were the major cause of morbidity and mortality in Korea. But reliable data are not available. After 1975, the overall morbidity and mortality from communicable diseases, rapidly declined. Recently many new pathogenic microbes were recognized: L. monocytogenes, Hantaan virus, Y. pseudotuberculosis, P. multocida, L. pneumophilia, Human immunodeficiency virus (HIV), G. seoi, H. capsulatum, C. burnetii, V. cholerae O139, C. parvum, F. tularensis, E. coli O157:H7, B. burgdorferi, S. Typhimurium DT104, Rotavirus, hepatitis C virus and so on. Since the first HIV infection recognized in 1985, the reported cases of infection and deaths from HIV/AIDS have been steady increased each year. Legionnaire's disease, E. coli O157:H7 colitis, listeriosis and crytosporidiasis have been occurring just sporadically among immunocompromized cases. Many re-emerging communicable diseases were occurred in Korea: leptospirosis, malaria, endemic typhus, cholera, tsutsugamushi disease, salmonellosis, hepatitis A, shigellosis, mumps, measles, acute hemorrhagic conjunctivitis, brucellosis and so on. Leptospirosis and tsutsugamushi diseases have been noticed as major public health problems since 1980s. The malaria that had been virtually disappeared for a decade has reappeared from 1993 with striking increase of patients in recent 3-4 years. The distributions of salmonella and shigella serotypes have been changed a lot in recent few decades. Furthermore rapid emergence of antibiotic-resistant bacterial strains induces more difficult and complex problems in control of communicable diseases. We must recognize on the importance of environment and ecosystem conservation and careful prescription of anti-microbial agent in order to prevent communicable diseases.