• 제목/요약/키워드: n-sequence

검색결과 2,185건 처리시간 0.025초

시설 상추에 대한 Rhodobacter sp. SA16 처리 효과 (Effects of Rhodobacter sp. SA16 on Lettuce(Lactuca sativa L.) in Plastic Film House)

  • 이영한;정한택;윤한대
    • 한국환경농학회지
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    • 제27권2호
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    • pp.163-170
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    • 2008
  • 유기물이 많고 작물생육이 양호한 시설 및 논토양에서 우점하는 광합성 세균을 분리하여 대두박 등의 유기물질과 혼합하여 혼합유기질 비료를 개발하였고 상추에 대한 시용효과를 검토하였다. 광합성 세균은 시설 및 논토양에서 형태적으로 가장 분포도가 많은 균주를 선정하고 이를 SA16 균주로 명명하였다. 선발된 균주는 폭 $0.5{\sim}1.2{\mu}m$, 길이 $2{\sim}2.5{\mu}m$의 간균 혹은 구균에 가까운 형태로 관찰되었으며 16S rDNA 분석으로 1.3 kb DNA 단편을 얻어 염기서열을 분석한 결과 Rhodobacter sp.와 가장 유사한 것으로 나타났다. 질소기준으로 토양 검정시비 처리구와 동량인 혼합유기질비료 0.90 Mg $ha^{-1}$ 처리구는 대조구 보다 주당 엽수는 2장 정도 많았고 뿌리길이도 2 cm 정도 길었다. 혼합유기질 비료 시용량별 수확량은 $0.90{\geqq}0.45>1.35Mg\;ha^{-1}$ 순으로 많았으며 5% 수준에서 처리간에 유의성이 인정되었고 최대 수확량을 얻을 수 있는 적정 시용량을 2차 회귀곡선($y=-0.0008x^2+0.1174x+21.332,\;R^2=0.9951$)으로 구한 결과 0.72 Mg $ha^{-1}$로 나타났다. 수확 후 토양 공극율은 혼합유기질 비료1.35 Mg $ha^{-1}$ 처리구가 58.8%로 가장 좋은 것으로 나타났으며 혼합유기질 비료 처리에 따른 토양중 호기성세균의 분포는 혼합유기질 비료 0.90 및 1.35 Mg $ha^{-1}$ 처리구가 12.4, 및 $12.8{\times}10^6CFU\;g^{-1}$로 가장 높았다.

Genetic Diversity and Population Structure of Korean Mint Agastache rugosa (Fisch & Meyer) Kuntze (Lamiaceae) Using ISSR Markers

  • Kang, Man Jung;Sundan, Suresh;Lee, Gi An;Ko, Ho Cheol;Chung, Jong Wook;Huh, Yun Chan;Gwag, Jae Gyun;Oh, Se Jong;Kim, Yeon Gyu;Cho, Gyu Taek
    • 한국자원식물학회지
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    • 제26권3호
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    • pp.362-369
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    • 2013
  • Agastache rugosa, a member of the mint family (Labiatae), is a perennial herb widely distributed in East Asian countries. It is used in traditional medicine for the treatment of cholera, vomiting, and miasma. This study assessed the genetic diversity and population structures on 65 accessions of Korean mint A. rugosa germplasm based on inter simple sequence repeat (ISSR) markers. The selected nine ISSR primers produced reproducible polymorphic banding patterns. In total, 126 bands were scored; 119 (94.4%) were polymorphic. The number of bands generated per primer varied from 7 to 18. A minimum of seven bands was generated by primer 874, while a maximum of 18 bands was generated by the primer 844. Six primers (815, 826, 835, 844, 868, and 874) generated 100% polymorphic bands. This was supported by other parameters such as total gene diversity ($H_T$) values, which ranged from 0.112 to 0.330 with a mean of 0.218. The effective number of alleles ($N_E$) ranged from 1.174 to 1.486 with a mean value of 1.351. Nei's genetic diversity (H) mean value was 0.218, and Shannon's information index (I) mean value was 0.343. The high values for total gene diversity, effective number of alleles, Nei's genetic diversity, and Shannon's information index indicated substantial variations within the population. Cluster analysis showed characteristic grouping, which is not in accordance with their geographical affiliation. The implications of the results of this study in developing a strategy for the conservation and breeding of A. rugosa and other medicinal plant germplasm are discussed.

경기육괴서북부(京畿陸塊西北部)의 변성암복합체(變成岩複合體)의 층서(層序)와 지질구조(地質構造) (The Stratigraphy and Geologic Structure of the Metamorphic Complex in the Northwestern Area of the Kyonggi Massif)

  • 김옥준
    • 자원환경지질
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    • 제6권4호
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    • pp.201-216
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    • 1973
  • Being believed thus far to be distributed in the wide areas in the vicinity of Seoul, the capital city of Korea, the Yonchon System in its type locality in Yonchon-gun from which the name derived was never previously traced down or correlated to the Precambrian metamorphic complex in Seoul area where the present study was carried out. Due to in accessibility to Yonchon area, the writer also could not trace the system down to the area studied so as to correlate them. The present study endeavored to differentiate general stratigraphy and interprete the structure of the metamorphic complex in the area. In spite of the complexity of structure and rapid changes in lithofacies of the complex, it was succeeded to find out the key bed by which the stratigraphy and structure of the area could be straightened out. The keybeds were the Buchon limestone bed in the western parts of the area; Daisongri quartzite bed cropped out in the southeastern area; Jangrak quartzite bed scattered in the several localities in the northwest, southwest, and eastern parts of the area; and Earn quartzite bed isolated in the eastern part of the area. These keybeds together with the broad regional structure made it possible to differentiated the Precambrian rocks in ascending order into the Kyonggi metamorphic complex, Jangrak group and Chunsung group which are in clinounconformable relation, and the first complex were again separated in ascending order into Buchon, Sihung, and Yangpyong metermorphic groups. Althcugh it has being vaguely called as the Yonchon system thus far, the Kyonggi metamorphic complex have never been studied before. The complex might, however, belong to early to early-middle Precambrian age. The Jangrak and Chunsung group were correlated to the Sangwon system in North Korea by the writer (1972), but it became apparent that the rocks of the groups have different lithology and highly metamorphosd than those of the Sangwon system which has thick sequence of limestone and slightly metamorphosed. Being deposited in the margin of the basin, it is natural that the groups poccess terrestrial sediments rather than limestone, yet no explanation is at hand as to what was the cause of bringing such difference in grade of metamorphism. Thus the writer attempted to correlate the both groups to those of pre-Sangwon and post-Yonchon which might be middle to early-late Precambrian time. Judging from difference in grade of deformation and unconformity between the Kyonggi metamorphic complex, Jangrak group, and Chunsung group, three stages of orogeny were established: the Kyonggi, Jangrak orogenies, and Chunsung disturbance toward younger age. It is rather astonishing to point out that the structure of these Precambrian formations. was not effected by Daebo orogeny of Jurassic age. The post-tectonic block faulting was accompanied by these orogenies, and in consequence NNE and N-S trending faults were originated. These faulting were intermittented and repeated until Daebo orogeny at which granites intruded along these faults. The manifestation of alignment of these faults is indicated by the parallel and straight linear development of valleys and streams in the Kyonggi Massifland.

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장성(長省) 망간 광석(鑛石)에 대(對)한 광물학적(鑛物學的) 및 성인적(成因的) 연구(硏究) (Mineralogy and Genesis of Manganese Ores from the Jangseong Manganese Deposits, Korea)

  • 김수진;윤혜온
    • 자원환경지질
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    • 제19권4호
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    • pp.265-276
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    • 1986
  • 장성망간광상은 주로 두무동층과 동점규암충을 횡단하는 맥상광체로 산출된다. 본 지역의 망간광맥은 대체로 $N5-10^{\circ}E$의 주향과 $75-80^{\circ}SE$의 경사를 보인다. 망간광체는 일차적으로 열수기원의 탄산망간광석과 이의 표성산화물인 산화망간광석으로 구성되어 있다. 탄산망간광석은 주로 능망간석으로 구성되어 있고 약간의 황화광물들을 수반한다. 산화망간광석은 버어네사이트 캘코파냐이트, 토도로카이트, 엔소타이트, 연망간석으로 구성되어 있다. 탄산망간광물은 다음과 같은 순서로 산화되어 산화망간광물들이 형성되었다. 능망간석$\longrightarrow$버어네사이트$\longrightarrow$토도로카이트$\longrightarrow$엔소타이트$\longrightleftarrow$연망간석 한편 토도로카이트와 캘코파나이트는 후기에 공동에서 침전에 의하여 형성되기도 했다. 캘코파나이트의 열화학적인 성질을 X선회절분석, 적외선흡수분광분석, 열분석, 전자현미분석, 가열실험 등에 의하여 연구한 결과 $90{\sim}110^{\circ}C$에서 $4.8{\AA}$상으로 상변화하였다. 버어네사이트, 토도로카이트, 엔소타이트, 캘코파나이트 등의 전자현미분석 결과 본 광상에서 산출되는 산화망간 광물들은 대체로 Zn을 비교적 많이 함유하고 있음이 밝혀졌다.

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Construction of Mammalian Cell Expression Vector for pAcGFP-bFLIP(L) Fusion Protein and Its Expression in Follicular Granulosa Cells

  • Yang, Run Jun;Li, Wu Feng;Li, Jun Ya;Zhang, Lu Pei;Gao, Xue;Chen, Jin Bao;Xu, Shang Zhong
    • Asian-Australasian Journal of Animal Sciences
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    • 제23권3호
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    • pp.401-409
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    • 2010
  • FLICE inhibitory protein (FLIP) is one of the important anti-apoptotic proteins in the Fas/FasL apoptotic path which has death effect domains, mimicking the pro-domain of procaspase-8. To reveal the intracellular signal transduction molecules involved in the process of follicular development in the bovine ovary, we cloned the c-FLIP(L) gene in bovine ovary tissue with the reverse transcription polymerase chain reaction (RT-PCR), deleted the termination codon in its cDNA, and directionally cloned the amplified c-FLIP(L) gene into eukaryotic expression vector pAcGFP-Nl, including AcGFP, and successfully constructed the fusion protein recombinant plasmid. After identifying by restrictive enzyme BglII/EcoRI and sequencing, pAcGFP-bFLIP(L) was then transfected into follicular granulosa cells, mediated by Lipofectamine 2000, the expression of AcGFP observed and the transcription and expression of c-FLIP(L) detected by RT-PCR and Western blot. The results showed that the cattle c-FLIP(L) was successfully cloned; the pAcGFPbFLIP(L) fusion protein recombinant plasmid was successfuly constructed by introducing a BglII/EcoRI cloning site at the two ends of the c-FLIP(L) open reading frame and inserting a Kozak sequence before the start codon. AcGFP expression was detected as early as 24 h after transfection. The percentage of AcGFP positive cells reached about 65% after 24 h. A 1,483 bp transcription was amplified by RT-PCR, and a 83 kD target protein was detected by Western blot. Construction of the pAcGFP-bFLIP(L) recombinant plasmid should be helpful for further understanding the mechanism of regulation of c-FLIP(L) on bovine oocyte formation and development.

비대칭 Tetradentate Schiff 염기 리간드의 전이금속 착물에 대한 합성 및 특성 (Synthesis and Characterization of Some Transition Metal Complexes of Unsymmetrical Tetradentate Schiff Base Ligand)

  • Munde, A. S.;Jagdale, A. N.;Jadhav, S. M.;Chondhekar, T. K.
    • 대한화학회지
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    • 제53권4호
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    • pp.407-414
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    • 2009
  • o-phenylenediamine, 3-acetyl-6-methyl-(2H) pyran, 2,4 (3H)-dione (dehydroacetic acid or DHA) 및 살리실 알데히드로부터 유도한 4-hydroxy-3-(1-{2-(2-hydroxy-benzylidene)-amino phenylimino}-ethyl)-6- methy-pyran-2-one (H2L) 의 Cu(II), Ni(II), Co(II), Mn(II) 및 Fe(III) 고체 착물을 합성한 후, 원소분석, 전도 도법, 수자율, 자외선-가시선, 적외선, $^1H$-NMR 스펙트라, X-선 회절, 열분석을 통해 특성을 규명하고 항균 활성을 조사하였다. IR 스펙트럼 데이터로부터 이 리간드가 중심 금속이온에 대해 ONNO 주개원자 배열을 갖는 이염기성 네자리 리간드로 행동함을 제안하였다. 원소분석 데이터로부터 이들 착물의 화학량론이 1:1 (금속:리간드)임을 알았다. 물리-화학적 데이타로부터 Cu(II) 및 Ni(II) 착물이 사각평면 기 하구조, 그리고 Co(II), Mn(II) 및 Fe(III) 착물이 팔면체 기하구조임을 제안하였다. X-선 회절 데이터로 부터 Cu(II) 착물이 사방정계(orthorhombic) 결정계, Ni(II), Co(II) 및 Fe(III) 착물이 단사계(monoclinic) 결정계 그리고 Mn(II) 착물이 정방정계(tetragonal) 결정계임을 제안하였다. 착물의 열적 행동(TG/DTA) 을 연구하였으며 Coats-Redfern 방법으로 반응속도 파라메터를 결정하였다. 리간드와 이들 금속 착물을 이용하여 Staphylococcus aureus 및 Escherichia coli에 대한 향균 활성과 Aspergillus Niger 및 Trichoderma 에 대한 살균 활성을 조사하였다.

임상에서 분리한 Streptococcus pneumoniae에서 Levofloxacin 내성유전자의 비교 연구 (Comparative Analysis of Levofloxacin Resistant Genes in Clinically Isolated Streptococcus pneumoniae)

  • 최재민;박선희;윤지아;한양금;이인수
    • 치위생과학회지
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    • 제12권2호
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    • pp.109-113
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    • 2012
  • 임상에서 분리한 총 174 균주의 S. pneumoniae를 대상으로 검체별, 연령별, 성별 분리빈도 및 levofloxacin의 내성도를 조사하였으며, 항생제 감수성 검사를 통해 다제내성도를 확인하였다. S. pneumoniae가 가장 많이 분리된 검체는 객담으로서 총 174 균주의 89.7%인 156 균주가 분리되었다. 특히 남성과 51세의 고령환자에서 분리빈도가 높았으며, 분리된 levofloxacin 내성 8 균주 모두는 penicillin, tetracycle, erytromycin, clindamycin 및 trimethoprim-sulfamethoxazoe 대한 다제내성도 함께 소유하고 있는 것으로 확인되었다. 분리된 levofloxacin 내성균주 SP32 (MIC $64{\mu}g/mL$)와 SP96 (MIC $8{\mu}g/mL$)의 QRDR 염기서열을 분석한 결과, SP32와 SP96 균주의 GyrA에서 Ser-81$\rightarrow$Phe로, SP96에서 Ser-11$\rightarrow$Gly으로 아미노산 치환이 각각 확인되었고, ParC에서는 두 균주 모두 Ser-79$\rightarrow$Phe으로 치환된 돌연변이가 확인되었다.

Overlapping Region of p53/Wrap53 Transcripts: Mutational Analysis and Sequence Similarity with microRNA-4732-5p

  • Pouladi, Nasser;Kouhsari, Shideh Montasser;Feizi, Mohammadali Hosseinpour;Gavgani, Reyhaneh Ravanbakhsh;Azarfam, Parvin
    • Asian Pacific Journal of Cancer Prevention
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    • 제14권6호
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    • pp.3503-3507
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    • 2013
  • Background: Although the majority of investigations concerned with TP53 and its protein have focused on coding regions, recently a set of studies highlighted significant roles of regulatory elements located in p53 mRNA, especially 5'UTR. The wrap53${\alpha}$ transcript is one of those that acts as a natural antisense agent, forming RNA-RNA hybrids with p53 mRNA and protecting it from degradation. Materials and Methods: In this study, we focused on the mutation status of exon $1{\alpha}$ of the WRAP53 gene (according to exon 1 of p53) in 160 breast tumor tissue samples and conducted a bioinformatics search for probable miRNA binding site in the p53/wrap53 overlapping region. Mutations were detected, using single stranded conformation polymorphism (SSCP) and sequencing. We applied the miRBase database for prediction of miRNAs which target overlapping region of p53/wrap53 transcripts. Results: Our results showed all samples to have wild type alleles in exon 1 of TP53 gene. We could detect a novel and unreported intronic mutation (IVS1+56, G>C) outside overlapping regions of p53/wrap53 genes in breast cancer tissues and also predict the presence of a binding site for miR-4732-5p in the 5'UTR of Wrap53 mRNA. Conclusions: From our findings we propose designing further studies focused on overexpression of miRNA-4732-5p and introducing different mutations in the overlapping region of wrap53 and p53 genes in order to study their effects on p53 and its ${\Delta}N$ isoform (${\Delta}$40p53) expression. The results may provide new pieces in the p53 targeting puzzle for cancer therapy.

COMPARATIVE ACCURACY OF THE SPLINTED AND UNSPLINTED IMPRESSION METHODS FOR INTERNAL CONNECTION

  • Choi, Jung-Han;Kim, Chang-Whe;Jang, Kyung-Soo;Lim, Young-Jin
    • 대한치과보철학회지
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    • 제43권3호
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    • pp.352-362
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    • 2005
  • Statement of problem. Accurate impression is essential to success of implant prostheses. But there have been few studies about the accuracy of fixture-level impression techniques in internal connection implant systems. Purpose. The purpose of this study was to compare the accuracy of two fixture-level impression techniques in two conditions (parallel and divergent) and to assess the effect of tightening sequences and forces on stresses generated on superstructures in internal connection implant system (Astra Tech). Material and methods. Two metal master frameworks made from two abutments (Cast-to Abutment ST) each and a corresponding, passively fitting, dental stone master cast with four fixture replicas (Fixture Replica ST) were fabricated. Ten dental stone casts for each impression techniques (direct unsplinted & splinted technique) were made with vinyl polysiloxane impressions from the master cast. Strain gauges for each framework were fixed midway between abutments to measure the degree of framework deformation on each stone cast. Pairs of strain gauges placed opposite each other constituted one channel (half Wheatstone bridge) to read deformation in four directions (superior, inferior, anterior, and posterior). Deformation data were analyzed using one-way ANOVA and the Tukey test at the .01 level of significance. And the effect of tightening sequences (right-to-left and left-to-right) and forces (10 Ncm and 20 Ncm) were assessed with ten stone casts made from parallel condition by the splinted technique. Deformation data were analyzed using paired t-test at the .01 level of significance. Conclusions. Within the limitations of this study, the following conclusions could be drawn. 1. Frameworks bent toward the inferior side on all casts made by both direct unsplinted and splinted impression techniques in both parallel and divergent conditions. 2. There was no statistically significant difference of accuracy between the direct unsplinted and splinted impression techniques in both parallel and divergent conditions (P>.01). 3. There was no statistically significant difference of stress according to screw tightening sequences in casts made by the splinted impression technique in parallel condition (P>.01). 4. Greater tightening force resulted in greater stress in casts made by the splinted impression technique in parallel condition (P<.01).

인체 S100A2 단백질에 특이적인 단일클론 항체 (Characterization of the Monoclonal Antibody Specific to Human S100A2 Protein)

  • 김재화;윤선영;김주헌;주종혁;김진숙;이영희;염영일;최용경;최인성
    • IMMUNE NETWORK
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    • 제3권1호
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    • pp.16-22
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    • 2003
  • Background: The S100A2 gene, also known as S100L or CaN19, encodes a protein comprised of 99-amino acids, is a member of the calcium-binding proteins of EF-hand family. According to a recent study, this gene was over-expressed in several early and malignant carcinomas compared to normal tissues. To elucidate the role of S100A2 protein in the process during carcinogenesis, production of monoclonal antibody specific to the protein is essential. Methods: First, cDNA sequence coding for ORF region of human S100A2 gene was amplified and cloned into an expression vector to produce GST fusion protein. Recombinant S100A2 protein and subsequently, monoclonal antibody to the protein were produced. The specificity of anti-S100A2 monoclonal antibody was confirmed by immunoblot analysis of cross reactivity to other recombinant proteins of S100A family (GST-S100A1, GST-S100A4 and GST-S100A6). To confirm the relation of S100A2 to cervical carcinogenesis, S100A2 protein in early cervical carcinoma tissue was immunostained using the monoclonal antibody. Results: GST-S100A2 recombinant protein was purified by affinity chromatography and then fusion protein was cleaved and S100A2 protein was isolated. The monoclonal antibody (KK0723; Korean patent pending #2001-30294) to the protein was produced and the antibody did not react with other members of EF-hand family proteins such as S100A1, S100A4 and S100A6. Conclusion: These data suggest that anti-S100A2 monoclonal antibody produced in this study can be very useful for the early detection of cervical carcinoma and elucidation of mechanism during the early cervical carcinogenesis.