• Title/Summary/Keyword: multidimensional scaling

Search Result 357, Processing Time 0.02 seconds

Distribution Changes of Freshwater Microalgae Community in the Nakdonggang River, Korea (낙동강 담수 미세조류 군집 분포 변화)

  • Suk Min Yun;Dae Ryul Kwon;Mirye Park;Chang Soo Lee;Sang Deuk Lee
    • Journal of Korean Society on Water Environment
    • /
    • v.39 no.2
    • /
    • pp.181-193
    • /
    • 2023
  • Distribution changes in microalgae communities were studied in the Nakdonggang River at two sampling stations (St.1 Gyeongcheongyo Bridge (GB) and St.2 Daedong Wharf (DW)) at monthly intervals from January 2021 to November 2021. A total of 83 taxa included 82 species, 1 forma, belonging to 49 genera, 32 families, 21 orders, and 8 classes. The most important groups were Bacillariophyta and Chlorophyta. The number of species ranged from 5 to 24 in GB, and from 9 to 21 taxa in DW. The contribution of Bacillariophyta to the total species richness was the highest during all survey periods, and Chlorophyta yielded the next highest value in the study area. The dominant taxa were Aulacoseira ambigua, A. ambigua f. japonica, and Ulnaria acus in this study. Cluster analysis and non-metric multidimensional scaling (nMDS) analysis based on Bray- Curtis similarity identified 4 major groups, which corresponded to microalgae assemblages and their characteristic species. Correlation was analyzed through the CCA analysis. It was found that there was a correlation between the microalgae and environmental factors. It was revealed that the divided groups were distinguished because of the differences by the survey period. Therefore, seasonal change was judged as a major factor affecting the distribution of microalgae communities.

What is the masculinity of Korean men? Concept mapping of masculinity (한국 남성의 남자다움은 무엇인가?: 남성성에 대한 개념도 연구)

  • Woo Sungbum
    • Korean Journal of Culture and Social Issue
    • /
    • v.25 no.3
    • /
    • pp.203-229
    • /
    • 2019
  • The purpose of this study was to identify the factors that constitute masculine norms of masculine in Korean society. The definition of masculinity was to conform to the male-dominated standard formed socially and culturally. The results of in-depth interviews with 20 male participants were used for a concept mapping analysis to explore the configural representations of Korean masculine norms. After extracting the key sentences related to masculine norms, the participants sorted the 55 key sentences based on similarities and assessed the importance, which was then analyzed with multidimensional scaling method and cluster analysis. The result showed two dimensions, one representing social-personal domain and the other implying dominance-support domain as well as six clusters of caregiver, leadership, emotion suppression, job ability and organizational social adaptation, Expects the masculine abilities, power and control. Finally, the implications of this study, limitations, and the suggestions for future research were discussed.

Plant co-occurrence patterns and soil environments associated with three dominant plants in the Arctic

  • Deokjoo Son
    • Journal of Ecology and Environment
    • /
    • v.47 no.1
    • /
    • pp.1-13
    • /
    • 2023
  • Background: The positive effects of Arctic plants on the soil environment and plant-species co-occurrence patterns are known to be particularly important in physically harsh environments. Although three dominant plants (Cassiope tetragona, Dryas octopetala, and Silene acaulis) are abundant in the Arctic ecosystem at Ny-Ålesund, Svalbard, few studies have examined their occurrence patterns with other species and their buffering effect on soil-temperature and soil-moisture fluctuation. To quantify the plant-species co-occurrence patterns and their positive effects on soil environments, I surveyed the vegetation cover, analyzed the soil-chemical properties (total carbon, total nitrogen, pH, and soil organic matter) from 101 open plots, and measured the daily soil-temperature and soil-moisture content under three dominant plant patches and bare soil. Results: The Cassiope tetragona and Dryas octopetala communities increased the soil-temperature stability; however, the three dominant plant communities did not significantly affect the soil-moisture stability. Non-metric multidimensional scaling separated the sampling sites into three groups based on the different vegetation compositions. The three dominant plants occurred randomly with other species; however, the vegetation composition of two positive co-occurring species pairs (Oxyria digyna-Cerastium acrticum and Luzula confusa-Salix polaris) was examined. The plant species richness did not significantly differ in the three plant communities. Conclusions: The three plant communities showed distinctive vegetation compositions; however, the three dominant plants were randomly and widely distributed throughout the study sites. Although the facilitative effects of the three Arctic plants on increases in the soil-moisture fluctuation and richness were not quantified, this research enables a deeper understanding of plant co-occurrence patterns in Arctic ecosystems and thereby contributes to predicting the shift in vegetation composition and coexistence in response to climate warming. This research highlights the need to better understand plant-plant interactions within tundra communities.

Comparison of rectum fecal bacterial community of finishing bulls fed high-concentrate diets with active dry yeast and yeast culture supplementation

  • Kai, Gao;Chunyin, Geng
    • Animal Bioscience
    • /
    • v.36 no.1
    • /
    • pp.63-74
    • /
    • 2023
  • Objective: The objective of this study was to investigate the effects of feeding active dry yeast (ADY) and yeast culture (YC) on fecal bacterial community in finishing bulls fed high-concentrate diets in the same experimental environment. Methods: Forty-five healthy finishing cattle (Simmental×Chinese Luxi yellow bulls; 24 months; 505±29 kg) were randomly divided into three groups: i) CON group (control group, only fed basal diet), ii) ADY group (fed basal diet + active dry yeast), and iii) YC group (fed basal diet + yeast culture). At the end of the trial, nine rectum fecal samples were randomly selected from each group for bacterial DNA sequencing. Results: There was no difference among groups about alpha diversity indices (all p>0.05), including ACE, Chao 1, Shannon, and Simpson indices. Principal component analysis and non-metric multidimensional scaling analysis showed a high similarity among three groups. Compared with CON group, ADY and YC groups had greater relative abundance of c_Clostridia, o_Oscillospirales, and f_Oscillospiraceae, but lesser relative abundance of g_Megasphaera, and s_Megasphaera_elsdenii (all p<0.01). And, the relative abundances of p_Firmicutes (p = 0.03), s_Prevotella_sp (p = 0.03), o_Clostridiales (p<0.01), g_Clostridium (p<0.01), f_Caloramatoraceae (p<0.01), and f_Ruminococcaceae (p = 0.04) were increased in the ADY group. The PICRUSt2 prediction results showed that the metabolic pathways had no significant differences among groups (p>0.05). Besides, the relative abundance of c_Clostridia (r = 0.42), and f_Oscillospiraceae (r = 0.40) were positively correlated to average daily gain of finishing bulls (p<0.05). Conclusion: Both of ADY and YC had no effect on diversity of fecal bacteria in finishing bulls, but the supplementation of ADY and YC can improve the large intestinal function in finishing bulls by increasing the abundance of cellulolytic bacteria and altering the abundance of lactic acid-utilizing bacteria.

A Study on Coffee Shop Brands Image Positioning by Store Personality Scale (점포개성 척도를 이용한 커피전문점 브랜드 이미지 포지셔닝)

  • Lee, Dong-Han;Lee, Chang-Joo;Lee, Hyung-Keun
    • The Korean Journal of Franchise Management
    • /
    • v.4 no.1
    • /
    • pp.25-53
    • /
    • 2013
  • The coffee shop market in Korea has been rapidly increased in quantitative terms over 10 years since the time when Starbucks opened their first shop in 1999. In recent years, the mature market characteristics that the serious competition of the coffee shop brands make the difference in taste or service reduce has been shown in that market. It's important to build the differentiated brand image for the differentiation of products and services and obtaining a price premium in serious competitive mature market. This study presented practical implications based on the results of empirical analysis of current positioning using 'Store Personality Scale.

A Study on the Cultural Characteristics of Korean Society: Discovering Its Categories Using the Cultural Consensus Model (한국사회의 문화적 특성에 관한 연구: 문화합의이론을 통한 범주의 발견)

  • Minbong You;Hyungin Shim
    • Korean Journal of Culture and Social Issue
    • /
    • v.19 no.3
    • /
    • pp.457-485
    • /
    • 2013
  • This study attempted to discover the dimensions of Korean culture, with the presumption that the cross-cultural studies(Hofstede, 1980, 1997; Schwartz, 1992, 1994; Trompenaars and Hampden-Turner, 1997; House et al., 2004) have limitation to explain non-western culture including Korean culture. Even though there are some Korean cultural studies, they used heuristic approaches applying the authors' experiences and intuitions. This study applied the Cultural Consensus Theory to overcome the previous studies' shortcomings and to discover the dimensions that can be empirically proved by data. In specific this study conducted in-depth interview, used content analysis, did frequency analysis, and applied pilesort technique, multidimensional scaling and network analysis. As a result, this study obtained five categories: public self-consciousness, group-focused orientation, affective human relations, hierarchical culture, and result-orientation. It is expected that these dimensions can be used as important variables that may explain Korean social phenomena.

  • PDF

Population diversity, admixture, and demographic trend of the Sumba Ongole cattle based on genomic data

  • Pita Sudrajad;Hartati Hartati;Bayu Dewantoro Putro Soewandi;Saiful Anwar;Angga Ardhati Rani Hapsari;Tri Satya Mastuti Widi;Sigit Bintara;Dyah Maharani
    • Animal Bioscience
    • /
    • v.37 no.4
    • /
    • pp.591-599
    • /
    • 2024
  • Objective: Sumba Ongole (SO) cattle are valuable breed due to their important role in the development of Indonesian cattle. Despite rapid advances in molecular technology, no genomic studies on SO cattle have been conducted to date. The aim of this study is to provide genomic profile related to the population diversity, admixture, and demographic trends of SO cattle. Methods: Genomic information was gathered from 79 SO cattle using the Illumina Bovine SNP50 v3 Beadchip, and for comparative purposes, additional genotypes from 209 cattle populations worldwide were included. The expected and observed heterozygosity, inbreeding coefficient, pairwise fixation indices between-population, and Nei's genetic distance were examined. Multidimensional scaling, admixture, and treemix analyses were used to investigate the population structure. Based on linkage disequilibrium and effective population size calculations, the demographic trend was observed. Results: The findings indicated that the genetic diversity of SO cattle was similar to that of other indicine breeds. SO cattle were genetically related to indicines but not to taurines or Bali cattle. The study further confirmed the close relationship between SO, Ongole, and Nellore cattle. Additionally, a small portion of the Ongole mixture were identified dominant in the SO population at the moment. The study also discovered that SO and Bali cattle (Bos javanicus) could have been ancestors in the development of Ongole Grade cattle, which corresponds to the documented history of Ongolization. Our finding indicate that SO cattle have maintained stability and possess unique traits separate from their ancestors. Conclusion: In conclusion, the genetic diversity of the SO cattle has been conserved as a result of the growing significance of the present demographic trend. Consistent endeavors are necessary to uphold the fitness of the breed.

Maximizing the potential of male layer embryos for cultivated chicken meat cell sourcing

  • Sun A Ock;Yeongji Kim;Young-Im Kim;Poongyeon Lee;Bo Ram Lee;Min Gook Lee
    • Journal of Animal Reproduction and Biotechnology
    • /
    • v.39 no.3
    • /
    • pp.212-219
    • /
    • 2024
  • Background: This study explores the potential of discarded male layer embryos as a sustainable and non-GMO cell source for cultivated chicken meat production. The research aims to identify efficient methods for isolating muscle progenitor cells (MPCs) with high proliferative potential by conducting transcriptome analysis on thigh muscle tissues from both male and female chick embryos. Methods: Transcriptome analysis was performed on the thigh muscle tissues of male and female chick embryos, aged 12-13 days, (n = 4 each), to investigate the gene expression profiles and identify strategies for efficiently isolating MPCs. This approach aims to pinpoint techniques that would allow for the selection of MPCs with optimal growth and proliferation capabilities. Results: Using heatmap, hierarchical clustering, and multidimensional scaling (MDS), we found no significant sex-based differences in gene expression, except for the overexpression of the female-specific gene LIPBLL. The expression of muscle stem cell factors, including PAX3, PAX7, and other myogenic regulatory genes, showed no significant variation. However, to recover MPC-rich cells isolated from male thigh muscle, we found that by the pre-plating 7 stage, myogenesis-related genes, MYHs and MUSTN1 were minimally expressed, while the cell cycle arrest gene CDKN1A sharply increased. Conclusions: Our findings suggest that simple cell isolation directly from tissue is a more scalable and efficient approach for cultivated meat production, compared to labor-intensive pre-plating methods, making it a viable solution for sustainable research and resource recycling.

Marine Algal Flora and Community Structure of Gogunsan Islands outside the Saemangeum Dike (새만금 방조제 외측 고군산군도 지역의 해조상 및 군집구조)

  • Kim, Ju-Hee;Ko, Yong-Deok;Kim, Young-Sik;Nam, Ki-Wan
    • Korean Journal of Environment and Ecology
    • /
    • v.25 no.2
    • /
    • pp.156-165
    • /
    • 2011
  • It is selected seven sites for marine algal flora and community structure and investigated seasonally from December 2008 to November 2009 in Gogunsan Islands, the west coast of Korea. A total of 58 species including 10 green, 16 brown and 32 red algae were collected and identified. Among these species, 11 species were found throughout the year. Annual mean biomass in dry weight were 213.8 g $m^{-2}$ at Sinsido 1, 143.1 g $m^{-2}$ at Sinsido 2, 133.3 g $m^{-2}$ at Sinsido 3, 164.0 g $m^{-2}$ at Munyeodo, 116.9 g $m^{-2}$ at Seonyudo, and 145.1 g $m^{-2}$ at Jangjado. Maximum biomass was recorded in Sinsido 1, and minimum mean biomass was Sinsido 4. The dominant species based on biomass were Sargassum thunbergii, Ulva pertusa, Sargassum fusiforme and Corallina pilulifera. S. thunbergii was the representative alga occurred at all seasons. The flora investigated could be classified into six functional groups such as coarsely branched form (46.6%), filamentous form (27.6%), sheet form (17.2%), thick leathery form (3.4%), jointed calcareous form (3.4%) and crustose form (1.7%). The R/P, C/P and (R+C)/P value reflecting flora characteristics were 0.33~0.75, 1.11~2.50, 1.47~3.25, respectively. Diversity index (H') and dominance index (DI) indicated that stability of seaweed community of Gogunsan Islands was unstable and environmental conditions were bad. According to multidimensional scaling (MDS) and cluster analysis, Gogunsan Islands were divided into three distinct groups. The first group was Sinsido 2, Sinsido 3, Seonyudo and Muyeodo and the second group comprised Sinsido 1 and Jangjado and the other was Sinsido 4 due to meaningful difference in similarity.

The Habitat Classification of mammals in Korea based on the National Ecosystem Survey (전국자연환경조사를 활용한 포유류 서식지 유형의 분류)

  • Lee, Hwajin;Ha, Jeongwook;Cha, Jinyeol;Lee, Junghyo;Yoon, Heenam;Chung, Chulun;Oh, Hongshik;Bae, Soyeon
    • Journal of Environmental Impact Assessment
    • /
    • v.26 no.2
    • /
    • pp.160-170
    • /
    • 2017
  • The purpose of this study is to perform clustering of the habitat types and to identify the characteristics of species in the habitat types using mammal data (70,562) of the 3rd National Ecosystem Survey conducted from 2006 to 2012. The 15 habitat types recorded in the field-paper of the 3rd National ecosystem survey were reclassified, which was followed by the statistical analysis of mammal habitat types. In the habitat types cluster analysis, non-hierarchical cluster analysis (k-means cluster analysis), hierarchical cluster analysis, and non-metric multidimensional scaling method were applied to 14 habitat types recorded more than 30 times. A total of 7 Orders, 16 Families, and 39 Species of mammals were identified in the 3rd National Ecosystem Survey collected nationwide. When 11 clusters were classified by habitat types, the simple structure index was the highest (ssi = 0.07). As a result of the similarities and hierarchies between habitat types suggested by the hierarchical clustering analysis, the residential areas were the most different habitat types for mammals; the next following type was a cluster together with rivers and coasts. The results of the non-metric multidimensional scaling analysis demonstrated that both Mus musculus and Rattus norvegicus restrictively appeared in a residential area, which is the most discriminating habitat type. Lutra lutra restrictively appeared in coastal and river areas. In summary, according to our results, the mammalian habitat can be divided into the following four types: (1) the forest type (using forest as the main habitat and migration route); (2) the river type (using water as the main habitat); (3) the residence habitat (living near residential area); and (4) the lowland type (consuming grain or seeds as the main feeding resource).