• Title/Summary/Keyword: large subunit

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Regulation of adductor muscle growth by the IGF-1/AKT pathway in the triploid Pacific oyster, Crassostrea gigas

  • Kim, Eun-Young;Choi, Youn Hee
    • Fisheries and Aquatic Sciences
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    • v.22 no.9
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    • pp.19.1-19.10
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    • 2019
  • We investigated the insulin-like growth factor 1 (IGF-1)/AKT signaling pathway involved in muscle formation, growth, and movement in the adductor muscle of triploid Pacific oyster, Crassostrea gigas. Large and small triploid oysters (LTs and STs) cultured under identical conditions were screened, and the signaling pathways of individuals with superior growth were compared and analyzed. mRNA and protein expression levels of actin, troponin, tropomyosin, and myosin, proteins important in muscle formation, were higher in LTs compared with STs. Expression levels of IGF-1, IGF binding protein (IGFBP), and IGFBP complex acid-labile subunit were also higher in LTs compared with STs. Phosphorylation of the IGF receptor as well as that of AKT was high in LTs. In addition, the expression of phosphomammalian target of rapamycin and phospho-glycogen synthase kinase $3{\beta}$ was increased and the expression of Forkhead box O3 was decreased in LTs. Therefore, we suggested that the IGF-1/AKT signaling pathway affects the formation, growth, and movement of the adductor muscle in triploid oysters.

First Record of the Brackish Water Amphipod Jesogammarus (Jesogammarus) hinumensis (Amphipoda: Anisogammaridae) from Korea with DNA Barcode Analysis among Jesogammarus Species

  • Lee, Chi-Woo;Tomikawa, Ko;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • v.35 no.3
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    • pp.151-155
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    • 2019
  • Jesogammarus (Jesogammarus) hinumensis Morino, 1993 was discovered firstly from a brackish water region in Jeju Island, Korea. To identification of the specimens we conducted both of morphological and molecular analyses. This species is characterized by having large eyes and a robust seta on the mandibular palp article 1. The morphology of this Korean specimens was well matched with the original description without variation. The mitochondrial cytochrome c oxidase subunit I(COI) sequences of the present specimens were also completely identical to the sequences of J. (J.) hinumensis collected from the type locality of the species. Thus, we concluded that the Jesogammarus species from Jeju Island is J.(J.) hinumensis, based on both morphological and molecular data.

Molecular and Morphological Confirmation of Three Undescribed Species of Mortierella from Korea

  • Nguyen, Thuong T.T.;Park, Se Won;Pangging, Monmi;Lee, Hyang Burm
    • Mycobiology
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    • v.47 no.1
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    • pp.31-39
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    • 2019
  • Three fungal isolates designated as CNUFC-YR329-1, CNUFC-PTS103-1, and CNUFC-PTS2-1 were discovered during a survey of fungal diversity of the order Mortierellales from freshwater and pine tree rhizosphere soil samples in Korea. The strains were analyzed morphologically and phylogenetically based on the internal transcribed spacer (ITS) and large subunit (LSU) of ribosomal DNA gene sequences. Based on their morphology and phylogeny, the three isolates were identified as Mortierella elongata, M. horticola, and M. humilis, respectively. To the best of our knowledge, M. elongata, M. horticola, and M. humilis, belonging to an undiscovered taxon, have not been previously described in Korea.

A New Record of the Brittle Star, Amphistigma minuta (Ophiuroidea: Amphilepidida: Amphiuridae), from Jeju Island, Korea

  • Lee, Taekjun;Shin, Sook
    • Animal Systematics, Evolution and Diversity
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    • v.35 no.2
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    • pp.84-90
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    • 2019
  • The brittle star, Amphistigma minuta H.L. Clark, 1938, was collected from Munseom Island, Jeju-do, Korea, by SCUBA diving. This species has distinct morphological features, as follows: a small disk with large papillae on the disk margin; slender arms and four arm spines at proximal; and oral parts the same as those of the genus Amphipholis. Additionally, we obtained partial sequences of the cytochrome c oxidase subunit I gene (COI) (513 bp) and compared them with sequences from Australian A. minuta and 13 other species of Amphiuridae. As a result, intraspecific pairwise distance was 0.4% between two Korean individuals and intraspecific distance between the Australian and the Korean populations was 2.6-2.8%, which indicates they should be considered as the same species. Ultimately, 15 species of the family Amphiuridae have currently been recorded in Korea, including A. minuta.

Four Unreported Endophytic Fungi Isolated from Roots of Quercus spp. in Korea

  • Choi, Jae-Wook;Gwon, Ju-Hui;Park, Hyeok;Lee, Jong-Chul;Eom, Ahn-Heum
    • The Korean Journal of Mycology
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    • v.49 no.3
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    • pp.325-335
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    • 2021
  • We isolated endophytic fungi from the roots of Quercus spp. in Korea. The isolates were identified based on morphological and molecular characteristics from the nucleotide sequences of the internal transcribed spacer and large subunit of rDNA regions. We confirmed that the four species we isolated - Oidiodendron citrinum, Acremonium crotocinigenum, Mammaria echinobotryoides, and Pleotrichocladium opacum - have not been recorded previously in Korea. Herein, we present their morphological characteristics and the result of phylogenetic analysis.

Report on Tuber huidongense, a Truffle Species Previously Unrecorded in Korea

  • Park, Hyeok;Gwon, Ju-Hui;Lee, Jong-Chul;Kim, Hyun Suk;Oh, Deuk Sil;Eom, Ahn-Heum
    • The Korean Journal of Mycology
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    • v.48 no.4
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    • pp.505-510
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    • 2020
  • The fruiting bodies and roots of a Tuber species were collected from the rhizosphere of Quercus dentata in Pohang, Korea. The morphological characteristics of the ascoma and ectomycorrhizal roots were studied, and phylogenetic analyses were performed using the sequences of the internal transcribed spacer, large subunit rDNA, and β-tubulin DNA. Based on the features of the fruiting bodies, the species was identified to be Tuber huidongense, which has not been reported earlier in Korea. The morphological characteristics and phylogenetic analysis of T. huidongense are described in the present study.

Morphological and Phylogenetic Characteristics of Tuber himalayense Collected from Rhizosphere of Quercus dentata in Korea

  • Park, Hyeok;Gwon, Ju-Hui;Lee, Jong-Chul;Kim, Hyun Suk;Seo, Geon-Sik;Eom, Ahn-Heum
    • The Korean Journal of Mycology
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    • v.49 no.1
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    • pp.101-108
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    • 2021
  • We collected the ascomata of Tuber species from the rhizosphere of Quercus dentata in Danyang, Korea. We observed the morphological characteristics of ectomycorrhizal roots and ascomata, and identified the species based on the results of the phylogenetic analysis conducted using the DNA sequences of an internal transcribed spacer, a large-subunit rDNA, translation elongation factor 1-α DNA (TEF1), and MAT. Finally, we identified the fungal species as Tuber himalayense B.C. Zhang & Minter, which has not been recorded previously in Korea. We evaluated the morphological characteristics and conducted phylogenetic analysis of the ascoma and mycorrhiza (associated with Q. dentata) of T. himalayense.

Six Newly Recorded Fungal Taxa from Freshwater Niche in Korea

  • Lim, Hyo Jin;Nguyen, Thuong T.T;Lee, Hyang Burm
    • Mycobiology
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    • v.49 no.2
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    • pp.105-121
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    • 2021
  • Six interesting fungal strains were isolated during a survey of fungal diversity associated with freshwater; these strains were designated as CNUFC YJW2-22, CNUFC MSW11-6-2, CNUFC HRS5-3, CNUFC MSW242-6, CNUFC DMW2-2, and CNUFC CPWS-1. Based on a polyphasic approach including phylogenetic analyses of internal transcribed space (ITS), large subunit (LSU), beta-tubulin (BenA), and calmodulin (CaM) gene sequences, morphological analyses, the six strains were found to be identical to Acremonium guillematii, Cadophora novi-eboraci, Lectera nordwiniana, Mycoarthris corallina, Talaromyces siamensis, and Tetracladium globosum, respectively. To our knowledge, these are the first records of the rare Lectera, Mycoarthris, and Tetracladium genera in Korea, and the first reports of A. guillematii, C. novi-eboraci, L. nordwiniana, M. corallina, T. siamensis, and Te. globosum in a freshwater environment.

Puccinia klugkistiana, a Rust Fungus Occurring on Cleistogenes hackelii in Korea

  • Lee, Jae-Sung;Choi, Young-Joon;Choi, In-Young;Lee, Chong-Kyu;Shin, Hyeon-Dong
    • The Korean Journal of Mycology
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    • v.49 no.2
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    • pp.253-257
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    • 2021
  • Rust samples at both uredinial and telial stages were collected from Cleistogenes hackelii (Poaceae) in 2017 and 2019 in Korea. Based on the morphological examination and molecular phylogenetic analyses of the internal transcribed spacer (ITS) and large subunit (LSU) rDNA, it was identified as Puccinia klugkistiana. This rust at aecial stage has previously been recorded on Ligustrum japonicum (Oleaceae) in Korea. Puccinia diplachnicola has been previously recorded on C. hackelii in Korea; however, it is believed to be unrelated to the rust collected in the present study. Conclusively, this is the first study to report P. klugkistiana occurrence on C. hackelii in Korea.

New record of two marine synchaetid rotifers (Monogononta: Synchaeta) from Korea

  • Yang, Hee-Min;Min, Gi-Sik
    • Journal of Species Research
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    • v.11 no.3
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    • pp.174-179
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    • 2022
  • In this study, we identified two marine synchaetid rotifers, Synchaeta grimpei Remane, 1929 and S. vorax Rousselet, 1902, in Korea, which are the first synchaetid rotifers collected from a marine environment in the country. Prior to this study, all six synchaetids recorded in Korea were collected from freshwater environments. The morphological characteristics of both species are consistent with those recorded in previous studies of each species. Synchaeta grimpei is distinguished from other synchaetid rotifers by its cone-shaped body, wide and flat apical field, indistinct auricles, and long foot with two separated small toes. The morphological characteristics of Korean S. vorax specimens were most similar to the original description of Rousselet (1902), with its slender and cylindrical trunk shape, strongly convex apical field, and short foot with two small, separated toes. The rami of the Korean S. vorax specimen contained one frontal hook and several distinct and large teeth. Here, we provide the morphological diagnoses of the two synchaetid rotifers and the sequences of the partial mitochondrial cytochrome c oxidase subunit I (COI) of the two species.