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http://dx.doi.org/10.1080/12298093.2020.1862472

Six Newly Recorded Fungal Taxa from Freshwater Niche in Korea  

Lim, Hyo Jin (Environmental Microbiology Lab, Department of Agricultural Biological Chemistry, College of Agriculture & Life Sciences, Chonnam National University)
Nguyen, Thuong T.T (Environmental Microbiology Lab, Department of Agricultural Biological Chemistry, College of Agriculture & Life Sciences, Chonnam National University)
Lee, Hyang Burm (Environmental Microbiology Lab, Department of Agricultural Biological Chemistry, College of Agriculture & Life Sciences, Chonnam National University)
Publication Information
Mycobiology / v.49, no.2, 2021 , pp. 105-121 More about this Journal
Abstract
Six interesting fungal strains were isolated during a survey of fungal diversity associated with freshwater; these strains were designated as CNUFC YJW2-22, CNUFC MSW11-6-2, CNUFC HRS5-3, CNUFC MSW242-6, CNUFC DMW2-2, and CNUFC CPWS-1. Based on a polyphasic approach including phylogenetic analyses of internal transcribed space (ITS), large subunit (LSU), beta-tubulin (BenA), and calmodulin (CaM) gene sequences, morphological analyses, the six strains were found to be identical to Acremonium guillematii, Cadophora novi-eboraci, Lectera nordwiniana, Mycoarthris corallina, Talaromyces siamensis, and Tetracladium globosum, respectively. To our knowledge, these are the first records of the rare Lectera, Mycoarthris, and Tetracladium genera in Korea, and the first reports of A. guillematii, C. novi-eboraci, L. nordwiniana, M. corallina, T. siamensis, and Te. globosum in a freshwater environment.
Keywords
Ascomycetes; freshwater; morphology; phylogeny; taxonomy;
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1 Cannon PF, Buddie AG, Bridge PD, et al. Lectera, a new genus of the Plectosphaerellaceae for the legume pathogen Volutella colletotrichoides. MycoKeys. 2012;3:23-36.   DOI
2 Crous PW, Wingfield MJ, Burgess TI, et al. Fungal Planet description sheets: 558-624. Persoonia. 2017;38:240-384.   DOI
3 Benjamin CR. Ascocarps of Aspergillus and Penicillium. Mycologia. 1955;47(5):669-687.   DOI
4 Samson RA, Yilmaz N, Houbraken J, et al. Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium. Stud Mycol. 2011;70(1):159-183.   DOI
5 Sun BD, Chen AJ, Houbraken J, et al. New section and species in Talaromyces. MycoKeys. 2020;768:75-113.
6 Sang H, An T, Kim CS, et al. Two novel Talaromyces species isolated from medicinal crops in Korea. J Microbiol. 2013;51(5):704-708.   DOI
7 Samson RA, Houbraken J, Thrane U, et al. Food and indoor fungi. CBS laboratory manual series 2. Utrecht: CBS KNAW Fungal Biodiversity Centre. 2010. p. 390.
8 You YH, Aktaruzzaman M, Heo I, et al. Talaromyces halophytorum sp. nov. isolated from roots of Limonium tetragonum in Korea. Mycobiology. 2020;48(2):133-138.   DOI
9 Wildeman E. d. Notes Mycologiques. Fasc. 2. Annales de la Societe Belge de Microscopie. 1893;17:35-68.
10 Descals E, Webster J. Four new staurosporous hyphomycetes from mountain streams. Trans Brit Mycol Soc. 1983;69:80-109.
11 Ho WH, To PC, Hyde KD. Induction of antibiotic production of freshwater fungi using mix-culture fermentation. Fungal Divers. 2003;12:45-51.
12 Sati SC, Arya P, Belwal M. Tetracladium nainitalense sp. nov, a root endophyte from Kumaun Himalaya, India. Mycologia. 2009;101(5):692-695.   DOI
13 Wang M, Jiang X, Wu W, et al. Psychrophilic fungi from the world's roof. Persoonia. 2015;34:100-112.   DOI
14 Harrigan GG, Armentrout BL, Gloer JB, et al. Anguillosporal, a new antibacterial and antifungal metabolite from the freshwater fungus Anguillospora longissima. J Nat Prod. 1995;58(9):1467-1469.   DOI
15 Nguyen TTT, Lee SH, Jeon SJ, et al. First records of rare Ascomycete fungi, Acrostalagmus luteoalbus, Bartalinia robillardoides, and Collariella carteri from freshwater samples in Korea. Mycobiology. 2019;47(1):1-11.   DOI
16 Nam B, Lee JS, Lee HB, et al. Pezizomycotina (Ascomycota) fungi isolated from freshwater environments of Korea: Cladorrhinum australe, Curvularia muehlenbeckiae, Curvularia pseudobrachyspora, and Diaporthe longicolla. Kor J Mycol. 2020;48(1):29-38.   DOI
17 Nguyen TTT, Jeon YJ, Mun HY, et al. Isolation and characterization of four unrecorded Mucor species in Korea. Mycobiology. 2020;48(1):29-36.   DOI
18 Mun HY, Goh J, Yoosun O, et al. New records of three aquatic fungi isolated from freshwater in Samcheok and Yeongju, Korea. Kor J Mycol. 2016;44:247-251.   DOI
19 Nguyen TTT, Paul NC, Lee HB. Characterization of Paecilomyces variotii and Talaromyces amestolkiae in Korea based on the morphological characteristics and multigene phylogenetic analyses. Mycobiology. 2016;44(4):248-259.   DOI
20 White TJ, Bruns T, Lee S, et al. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis M.A., Gelfand DH, Sninsky JJ, White TJ, editors. PCR protocols: a guide to methods and applications. New York: Academic Press; 1990. p. 315-322.
21 Thompson JD, Gibson TJ, Plewniak F, et al. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 1997;25(24):4876-4882.   DOI
22 Kumar S, Stecher G, Tamura K. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol. 2016;33(7):1870-1874.   DOI
23 Gams W. Cephalosporium-artige Schimmelpilze (Hyphomycetes). Verlag Stuttgart: Gustav Fischer; 1971. p. 262.
24 Vilgalys R, Hester M. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol. 1990;172(8):4238-4246.   DOI
25 Shearer CA, Descals E, Kohlmeyer B, et al. Fungal biodiversity in aquatic habitats. Biodivers Conserv. 2007;16(1):49-67.   DOI
26 Peterson SW, Vega FE, Posada F, et al. Penicillium coffeae, a new endophytic species isolated from a coffee plant and its phylogenetic relationship to P. fellutanum, P. thiersii and P. brocae based on parsimony analysis of multilocus DNA sequences. Mycologia. 2005;97(3):659-666.   DOI
27 Schoch CL, Seifert KA, Huhndorf S, et al.; Fungal Barcoding Consortium Author List. Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. Proc Natl Acad Sci USA. 2012;109(16):6241-6246.   DOI
28 Yabuki T, Duncan I, Okuda T. Comparative study reveals unique features of the mycobiota in peat soils samples from Japan and Scotland. Mycoscience. 2014;55(3):168-176.   DOI
29 Grove WB. New or noteworthy fungi, Part IV. J Bot. 1912;50:9-18.
30 Goh TK, Hyde K. Biodiversity of freshwater fungi. J in Microbiol Biot. 1996;17(5-6):328-345.   DOI
31 Lagerberg T, Melin E, Lundberg G. Biological and practical researches into blueing in pine and spruce. Svenska Skogsvdrdsforen Tidskr. 1927;25:145-272.
32 Summerbell RC, Gueidan C, Schroers HJ, et al. Acremonium phylogenetic overview and revision of Gliomastix, Sarocladium, and Trichothecium. Stud Mycol. 2011;68:139-162.   DOI
33 Alfaro-Garcia A, Armengol J, Bruton BD, et al. The taxonomic position of the causal agent of Acremonium collapse of muskmelon. Mycologia. 1996;88(5):804-808.   DOI
34 Letourneau A, Seena S, Marvanova L, et al. Potential use of barcoding to identify aquatic hyphomycetes. Fungal Divers. 2010;40(1):51-64.   DOI
35 Goh J, Mun HY, Jeon YJ, et al. First report of six Sordariomycetes fungi isolated from plant litter in freshwater ecosystems of Korea. Kor J Mycol. 2020;48(2):103-116.   DOI
36 de Hoog GS, Guarro J, Gene J, et al. Atlas of clinical fungi. USB version 4.1. Utrecht: CBS-KNAW Fungal Biodiversity Centre; 2015.
37 Blanchette RA, Held BW, Jurgens JA, et al. Wood-destroying soft rot fungi in the historic expedition huts of Antarctica. Appl Environ Microbiol. 2004;70(3):1328-1335.   DOI
38 Park KM, Ku KH, Koo M. Antifungal activity of plant extracts against Fusarium oxysporum isolated from spoilage ginger. Kor J Food Preserv. 2018;25(2):173-180.   DOI
39 Marvanova L, Landvik S, Fisher PJ, et al. A new fungus with arthroconidia from foam. Nova Hedw. 2002;75(1):255-269.   DOI
40 Yilmaz N, Visagie CM, Houbraken J, et al. Polyphasic taxonomy of the genus Talaromyces. Stud Mycol. 2014; 78:175-341.   DOI
41 Adhikari M, Yadav DR, Kim S, et al. Discovery of two new Talaromyces species from crop field soil in Korea. Mycobiology. 2015;43(4):402-407.   DOI
42 Rusman Y, Held BW, Blanchette RA, et al. Cadopherone and colomitide polyketides from Cadophora wood-rot fungi associated with historic expedition huts in Antarctica. Phytochemistry. 2018;148:1-10.   DOI
43 Pangging M, Nguyen TTT, Lee HB. New records of four species belonging to Eurotiales from soil and freshwater in Korea. Mycobiology. 2019;47(2):154-164.   DOI
44 Heo I, Hong K, Yang H, et al. Diversity of Aspergillus, Penicillium, and Talaromyces species isolated from freshwater environments in Korea. Mycobiology. 2019;47(1):12-19.   DOI
45 Glass NL, Donaldson GC. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl Environ Microbiol. 1995;61(4):1323-1330.   DOI
46 Crous PW, Luangsa-Ard JJ, Wingfield MJ, et al. Fungal planet description sheets: 785-867. Persoonia. 2018;41:238-417.   DOI
47 Tian J, Lai D, Zhou L. Secondary metabolites from Acremonium fungi: Diverse structures and bioactivities. Mini Rev Med Chem. 2017;17(7):603-632.   DOI
48 Giraldo A, Crous PW. Inside plectosphaerellaceae. Stud Mycol. 2019;92:227-286.   DOI
49 You YH, Yoon H, Kang SM, et al. Cadophora malorum Cs-8-1 as a new fungal strain producing gibberellins isolated from Calystegia soldanella. J Basic Microbiol. 2013;53(7):630-634.   DOI
50 Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser. 1999;41:95-98.
51 Almeida C, Eguereva E, Kehraus S, et al. Hydroxylated sclerosporin derivatives from the marine-derived fungus Cadophora malorum. J Nat Prod. 2010;73(3):476-478.   DOI
52 Lin HJ, Chien CY, Huang JW. Pathogenicity and host range of Acremonium lactucae sp. nov., the causal agent of leaf brown spot of lettuce. Plant Pathol Bull. 2004;13:91-96.
53 Hyde KD, Dong Y, Phookamsak R, et al. Fungal diversity notes 1151-1276: taxonomic and phylogenetic contributions on genera and species of fungal taxa. Fungal Divers. 2020;100(1):5-277.   DOI
54 Wanasinghe DN, Phukhamsakda C, Hyde KD, et al. Fungal diversity notes 709-839: taxonomic and phylogenetic contributions to fungal taxa with an emphasis on fungi on Rosaceae. Fungal Divers. 2018;89(1):1-236.   DOI
55 Domsch KH, Gams W, Anderson TH. Compendium of soil fungi. Eching: IHW-Verlag; 2007. p. 30-38.
56 Shearer CA. The freshwater Ascomycetes. Nova Hedwigia. 1993;56:1-33.
57 Jones EBG, Hyde KD, Pang KL. Freshwater fungi and fungal-like organisms. Boston: De Gruyter; 2014.
58 Link HF. Observationes in ordines plantarum naturales. Dissertatio I. Magazin der Gesellschaft Naturforschenden Freunde Berlin, 1809.
59 Watanabe T, Watanabe Y, Fukatsu T. New species of Acremonium, Cylindrocarpon and Verticillium from soil in the Bonin (Ogasawara) Islands, Japan. Mycoscience. 2001;42(6):591-595.   DOI
60 Summerbell RC. Ascomycetes: Aspergillus, Fusarium, Sporothrix, Piedraia, and their relatives. In: Howard DH, editor. Pathogenic fungi in humans and animals. 2nd ed. New York: Marcel Dekker; 2003. p. 237-498.
61 Park SW, Nguyen TTT, Lee HB. Characterization of two species of Acremonium (unrecorded in Korea) from soil samples: A. variecolor and A. persicinum. Mycobiology. 2017;45(4):353-361.   DOI
62 Oh Y, Mun HY, Goh J, et al. New records of three Sordariomycetes fungi isolated from aquatic plants in Jeju, Korea. Kor J Mycol. 2018;46:91-97.   DOI
63 Travadon R, Lawrence DP, Rooney-Latham S, et al. Cadophora species associated with wood-decay of grapevine in North America. Fungal Biol. 2015;119(1):53-66.   DOI
64 Agusti-Brisach C, Gramaje D, Garcia-Jimenez J, et al. Detection of black-foot and petri disease pathogens in soils of grapevine nurseries and vineyards using bait plants. Plant Soil. 2013;364(1-2):5-18.   DOI
65 Blanchette RA, Held BW, Arenz BE, et al. An Antarctic hot spot for fungi at Shackleton's historic hut on cape royds. Microb Ecol. 2010;60(1):29-38.   DOI