• 제목/요약/키워드: isolated set

검색결과 278건 처리시간 0.027초

Similarities of Tobacco Mosaic Virus-Induced Hypersensitive Cell Death and Copper-Induced Abiotic Cell Death in Tobacco

  • Oh, Sang-Keun;Cheong, Jong-Joo;Ingyu Hwang;Park, Doil
    • The Plant Pathology Journal
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    • 제15권1호
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    • pp.8-13
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    • 1999
  • Hypersensitive cell death of plants during incompatible plant-pathogen interactions is one of the efficient defense mechanisms of plants against pathogen infections. For better understanding of the molecular mechanisms involved in the plant hypersensitive response (HR), TMV-induced biotic plant cell death and CuSO4-induced abiotic plant cell death were compared in terms of expression patterns of ten different defense-related genes as molecular markers. The genes include five pathogenesis-related protein genes, two plant secondary metabolite-associated genes, two oxidative stress-related genes and one wound-inducible gene isolated from tobacco. Northern blot analyses revealed that a same set of defense-related genes was induced during both biotic and abiotic cell death but with different time and magnitude. The expression of defense-related genes in tobacco plants was temporarily coincided with the time of cell death. However, when suspension cell cultures was used to monitor the expression of defense-related genes, different patterns of the gene expression were detected. This result implies that three are common and, in addition, also different branches of signaling pathways leading to the induced expression of defense-related genes in tobacco during the pathogen- and heavy metal-induced cell death.

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계지복령환이 Cholesterol 식이 생쥐의 SOD 유전자발현능에 미치는 영향 (Effects of geagibokrounghwan on superoxide dismutase gene expression in experimental mouse fed cholesterol)

  • 홍윤표;노승현
    • 대한한의학방제학회지
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    • 제6권1호
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    • pp.215-226
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    • 1998
  • Geagibokrounghwan (桂技茯笭湯) has long been used to cure human diseases such as vascular and blood disorders. However, it is still unkown on its action mechanism, physiolosical and biochemical meaning. Thus, many attempts were tried to show the scientific background covering the above mentioned mechanism. The effect of Geagibokrounghwan, which was known to date, as follow; effective circulation of body blood system, proliferation of leucocytes and antioxidative action. In this study, we have applied the Geagibokrounghwan administration and feed to mouse, to see effects on the expression of superoxide dismutase(SOD) mRNA as antioxidative agent and oxygen radical scavenger. Total RNAs includingmRNA have been isolated from liver and white blood cells after mice were fed with cholesterol in high dose. Also, in a separate group, the cholesterol-administrated mice were fed with Geagibokrounghwan to see the effects on SOD transcription. and then reverse transcriptase-polymerase chain reaction (RT-PCR) usion each primer set (SOD-F;GATGAAAGCGGTGT-3'; SOD-R; 5'-CCTGTGGAGTGATT-3') were performed to trace theamounts of mRNA. SOD mRNA was specifically expressed in Geagibokrounghwan-fed mice at 2 weeks after treatment, however, gradually reduced after 4 weeks. These results indicate that Geagibokrounghwan is highly applicable in treatment of the above mentioned human diseases.

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Expression and Characterization of Trehalose Biosynthetic Modules in the Adjacent Locus of the Salbostatin Gene Cluster

  • Choeng, Yong-Hoon;Yang, Ji-Yeon;Delcroix, Gaetan;Kim, Yoon-Jung;Chang, Yong-Keun;Hong, Soon-Kwang
    • Journal of Microbiology and Biotechnology
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    • 제17권10호
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    • pp.1675-1681
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    • 2007
  • The pseudodisaccharide salbostatin, which consists of valienamine linked to 2-amino-1,5-anhydro-2-deoxyglucitol, is a strong trehalase inhibitor. From our Streptomyces albus ATCC 21838 genomic library, we identified thirty-two ORFs in a 37-kb gene cluster. Twenty-one genes are supposed to be a complete set of modules responsible for the salbostatin biosynthesis. Through sequence analysis of the gene cluster, some of the upstream gene products (SalB, SalC, SalD, SalE, and SalF) revealed functional resemblance with trehalose biosynthetic enzymes. On the basis of this rationale, we isolated the five genes (salB, salC, salD, salE, and salF) from the S. albus ATCC 21838 and cloned them into the expression vector pWHM3. We demonstrated the noticeable expression and accumulation of trehalose, using only the five upstream biosynthetic gene cluster of salbostatin, in the transformed Streptomyces lividans TK24. Finally, 490 mg/l trehalose was produced by fermentation of the transformant with sucrosedepleted R2YE media.

PCR-Based Assay for Rapid and Specific Detection of the New Xanthomonas oryzae pv. oryzae K3a Race Using an AFLP-Derived Marker

  • Song, Eun-Sung;Kim, Song-Yi;Noh, Tae-Hwan;Cho, Heejung;Chae, Soo-Cheon;Lee, Byoung-Moo
    • Journal of Microbiology and Biotechnology
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    • 제24권6호
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    • pp.732-739
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    • 2014
  • We describe the development of a polymerase chain reaction method for the rapid, precise, and specific detection of the Xanthomonas oryzae pv. oryzae (Xoo) K3a race, the bacterial blight pathogen of rice. The specific primer set was designed to amplify a genomic locus derived from an amplified fragment length polymorphism specific for the K3a race. The 1,024 bp amplicon was generated from the DNA of 13 isolates of Xoo K3a races out of 119 isolates of other races, pathovars, and Xanthomonas species. The assay does not require isolated bacterial cells or DNA extraction. Moreover, the pathogen was quickly detected in rice leaf 2 days after inoculation with bacteria and at a distance of 8 cm from the rice leaf 5 days later. The results suggest that this PCR-based assay will be a useful and powerful tool for the detection and identification of the Xoo K3a race in rice plants as well as for early diagnosis of infection in paddy fields.

Naphthalene을 분해하는 Pseudomonas putida N3의 분리 및 특성 (Isolation and Characterization of Pseudomonas putida N3 Degrading Naphthalene)

  • 고영희;하일호;배경숙
    • 한국미생물·생명공학회지
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    • 제16권3호
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    • pp.199-204
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    • 1988
  • Naphthalene을 유일한 탄소원으로 이용하는 균을 분식 배양과 연속식 배양에 의해서 토양과 폐수로부터 분리하였다. 이 균은 Pseudomonas putida로 동정되었으며, 최적 pH와 온도는 각각 7.0과 3$0^{\circ}C$ 이었다. 분리된 균은 1,5-dihydroxynaphthalene을 naphthalene보다 더욱 잘 이용하였으며 benzoate와 salicylate도 이용하였다. 또한 catechol dl meta-분해경로를 통해서 분해되었으며, ampicillin, chloramphenicol, kanamycin, streptomycin에 대해서 강한 저항성을 지니고 있었으며, naphthalene의 분해에 관여하는 약 110kb 크기의 plasmid를 1개 지니고 있었다.

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발화속도 적응적인 한국어 연속음 인식기 (Adaptive Korean Continuous Speech Recognizer to Speech Rate)

  • 김재범;박찬규;한미성;이정현
    • 한국정보처리학회논문지
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    • 제4권6호
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    • pp.1531-1540
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    • 1997
  • 본 논문에서는 발화속도 측정과 이를 통한 보상방법을 통하여 성능 향상된 한국어 연속음 인식 시스템을 제안한다. 연속음 인식은 다양한 조음화 현상과 발화속도의 변화로 인하여 고립단어 인식에 비하여 어렵다. 따라서, 연속음 인식을 위해서는 조음화 현상과 발화속도의 변화를 모델링할 수 있는 방법이 필요하다. 본 논문에서는 발화속도를 포만트의 변화율로서 측정하였고, 이 정보를 이용하여 빠른 발화에서는 상대적으로 많은 특징벡터를 발생시켜 보상을 시도하였다. 또한 조음화 현상을 모델링하기 위하여 한국어의 다이폰 집합을 514개로 정의하였고, 훈련을 위한 음성 DB론느 ETRI의 445 단어 DB를 사용하였다. 이러한 방법을 결합한 한국어 연속음 인식기를 DHMM (Discrete Hidden Markov Model)으로 구현하여 인식률이 향상됨을 보였다.

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Integrated Thyristor Switch Structures for Capacitor Discharge Application

  • 김은동;장창리;김상철;백도현
    • 한국전기전자재료학회:학술대회논문집
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    • 한국전기전자재료학회 2001년도 춘계학술대회 논문집 반도체재료
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    • pp.22-25
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    • 2001
  • A thyristor switch circuit for capacitor discharge application, of which the equivalent circuit includes a resistor between cathode and gate of a reverse-conducting thyristor and an avalanche diode anti-parallel between its anode and gate to set thyristor tum-on voltage, is monolithically integrated by planar process with AVE double-implantation method. To ensure a lower breakdown voltage of the avalanche diode for thyristor tum-on than the break-over voltage of the thyristor, $p^+$ wells on thyristor p base layer are made by boron implantation/drive-in for a steeper doping profile with higher concentrations while rest p layers of thyristor and free-wheeling diode parts are formed with Al implantation/drive-in for a doping profile of lower steepness. The free-wheeling diode part is isolated from the thyristor part by formation of separated p-well emitter for suppressing commutation between them, which is achieved during the formation of thyristor p-base layer.

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PCR Based Detection of Phellinus linteus using Specific Primers Generated from Universal Rice Primer(URP) Derived PCR Polymorphic Band

  • Kang, Hee-Wan;Park, Dong-Suk;Park, Young-Jin;Lee, Byoung-Moo;Cho, Soo-Muk;Kim, Ki-Tae;Seo, Geon-Sik;Go, Seung-Joo
    • Mycobiology
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    • 제30권4호
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    • pp.202-207
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    • 2002
  • This study was carried out to develop specific primers for PCR detection of Phellinus linteus. Diverse genomes of 15 Phellinus spp. including five Phellinus linteus isolates were fingerprinted by Primer Universal rice primer(URP)1F. The URP-PCR pattern differentiated P. linteus isolates from other phellinus spp. A polymorphic band(2.8 kb), which is unique for P. linteus isolates, was isolated and sequenced. Twenty four-oligonucleotide primer pairs were designed based on information of DNA sequence. The primer set(PLSPF2/PLSPR1) amplified single band(2.2 kb) of expected size with genomic DNA from seven Phellinus linteus, but not with that of other Phellinus species tested. The primers could be used identically in both DNA samples from mycelium and fruit bodies. This specific primers could offer a useful tool for detecting and identifying P. linteus rapidly.

AFLP 방법을 이용한 담배 버어리종 특이 프라이머의 개발 (Identification of tobacco Burley species specific marker in several tobacco species by AFLP)

  • 이영기;정석훈;금완수;이정헌;이청호;이문수
    • 한국연초학회지
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    • 제28권2호
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    • pp.94-99
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    • 2006
  • AFLP(Amplified Fragment Length Polymorphism) analysis was conducted to cultivars of tobacco, Nicotiana tabacum in order to select the cultivar-specific markers. AFLP results using 12 primer sets revealed genetic diversity among 12 field grown tobacco cultivars. Polymorphic fragments amplified by PCR was purified and cloned to identify their nucleotide sequences. From the sequences of them, 40 primer sets were designed to select cultivar-specific markers. When genomic DNA isolated from tobacco were used as PCR template, a set of primers, BrSF/BrSR showed Burley-specific band patterns. The results indicate that AFLP technique used in this experiments is useful for identifying tobacco cultivars in a rapid manner.

Determination of epidemiological tetracycline MIC cut-off value for Vibrio ichthyoenteri

  • Han, Hyun-Ja;Kim, Do-Hyung;Lee, Deok-Chan;Won, Kyoung-Mi;Lee, Soon-Jeong;Cho, Mi-Young;Jee, Bo-Young;Kim, Jin-Woo
    • 한국어병학회지
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    • 제24권2호
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    • pp.95-102
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    • 2011
  • Normalized resistance interpretation (NRI) analysis for tetracycline was applied to generate information on the epidemiological cut-off value for Vibrio ichthyoenteri isolated from diseased olive flounder (Paralichthys olivaceus) larvae. Thus, 42 strains of V. ichthyoenteri were used to determine minimum inhibitory concentration (MIC) values of tetracycline using Etest. Also, 11 tetracycline resistance related genes were investigated by PCR method. Most tetracycline-resistant strains harbored both tetB and tetM with a few exceptions. NRI-derived mean and 2 SD above the mean of theoretical normal distributions of susceptible isolates were 0.33 mg/L and 1.66 mg/L, respectively. The epidemiological cut-off value for V. ichthyoenteri from the calculations could be set to S ${\leq}$ 2 mg/L. Of the 42 strains, 15 were classified as non-wild type (NWT), and MIC values of the NWT strains vary regardless of tetB and tetM detection, suggesting that there may be other mechanisms involved in tetracycline resistance in this Vibrio species.