PCR-Based Assay for Rapid and Specific Detection of the New Xanthomonas oryzae pv. oryzae K3a Race Using an AFLP-Derived Marker |
Song, Eun-Sung
(National Academy of Agricultural Science, Rural Development Administration)
Kim, Song-Yi (National Academy of Agricultural Science, Rural Development Administration) Noh, Tae-Hwan (National Institute of Crop Science, Rural Development Administration) Cho, Heejung (National Academy of Agricultural Science, Rural Development Administration) Chae, Soo-Cheon (Department of Horticulture, Kong-Ju National University) Lee, Byoung-Moo (National Academy of Agricultural Science, Rural Development Administration) |
1 | Adhikari TB, Mew TW, Leach JE. 1999. Genotypic and pathotypic diversity of Xanthomonas oryzae pv. oryzae in Nepal. Phytopathology 89: 687-694. DOI ScienceOn |
2 | Adachi N, Oku T. 2000. PCR-mediated detection of Xanthomonas oryzae pv. oryzae by amplification of the 16S- 23S rDNA spacer region sequence. J. Gen. Plant Pathol. 33: 303-309. |
3 | Adhikari TB, Mew TW, Teng PS. 1994. Phenotypic diversity of Xanthomonas oryzae pv. oryzae in Nepal. Plant Dis. 78: 68-72. DOI ScienceOn |
4 | Adhikari TB, Vera Cruz CM, Zhang Q, Nelson RJ, Skinner DZ, Mew TW, Leach JE. 1995. Genetic diversity of Xanthomonas oryzae pv. oryzae in Asia. Appl. Environ. Microbiol. 61: 966-971. |
5 | Cho MS, Kang MJ, Kim CK, Seol YJ, Hhan JH, Park SC, et al. 2011. Sensitive and specific detection of Xanthomonas oryzae pv. oryzae by real-time bio-PCR using pathovarspecific primers based on an rhs family gene. Plant Dis. 95: 589-594. DOI ScienceOn |
6 | George MLC, Bustamam M, Cruz WT, Leach JE, Nelson RJ. 1997. Movement of Xanthomonas oryzae pv. oryzae in southeast Asia detected using PCR-based DNA fingerprinting. Phytopathology 87: 302-309. DOI ScienceOn |
7 | Leach JE, Rhoads ML, Vera Cruz CM, White FF, Mew TW. 1992. Assessment of genetic diversity and population structure of Xanthomonas oryzae pv. oryzae with a repetitive DNA element. Appl. Environ. Microbiol. 52: 2188-2195. |
8 | Liu H, Yang W, Hu B, Liu F. 2007. Virulence analysis and race classification of Xanthomonas oryzae pv. oryzae in China. J. Phytopathol. 155: 129-135. DOI ScienceOn |
9 | Noh TH, Lee DK, Kang MH, Shin MS, Shim HK, Na SY. 2003. Identification of new race of Xanthomonas oryzae pv. oryzae (Xoo) in Korea. Phytopathology 93: s66. |
10 | Mew TW, Alvarez AM, Leach JE, Swing J. 1993. Focus on bacterial blight of rice. Plant Dis. 77: 5-12. DOI |
11 | Mew TW, Vera Cruz CM, Medalla ES. 1992. Changes in race frequency of Xanthomonas oryzae pv. oryzae in response to rice cultivars planted in the Philippines. Plant Dis. 76: 1029-1032. DOI |
12 | Noda T, Li C, Li J, Ochiai H, Ise K, Kaku H. 2001. Pathogenic diversity of Xanthomonas oryzae pv. oryzae strains from Yunnan Province, China. Jpn. Agric. Res. Q. 35: 97-103. DOI |
13 | Ochiai H, Horino O, Miyajima K, Kaku H. 2000. Genetic diversity of Xanthomonas oryzae pv. oryzae strains from Sri Lanka. Phytopathology 90: 415-421. DOI ScienceOn |
14 | Sakthivel N, Mortensen CN, Mathur SB. 2001. Detection of Xanthomonas oryzae pv. oryzae in artificially inoculated and naturally infected rice seeds and plants by molecular techniques. Appl. Microbiol. Biotechnol. 56: 435-441. DOI ScienceOn |
15 | Song ES, Lee BM, Lee CS, Park YJ. 2012. PCR-based rapid assay for discriminative detection of latent infections of rice bacterial blight. J. Phytopathol. 160: 195-200. DOI ScienceOn |
16 | Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Hornes M, et al. 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res. 23: 4407-4414. DOI ScienceOn |
17 | Yun MS, Lee EJ, Cho YS. 1985. Pathogenic specialization of the rice bacterial leaf blight pathogen, Xanthomonas campestris pv. oryzae: race classification based on reaction of Korean differential varieties. Kor. J. Plant Protect. 24: 97-102. |