• Title/Summary/Keyword: intraspecific evolution

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Intraspecific Phylogeny of the Korean Water Deer, Hydropotes inermis argyropus (Artiodactyla, Cervidae)

  • Kim, Hye Ri;Kim, Eui Kyung;Jeon, Mi Gyung;Park, Yung Chul
    • Animal Systematics, Evolution and Diversity
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    • v.31 no.2
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    • pp.118-121
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    • 2015
  • The water deer, Hydropotes inermis (Cervidae), is native to China and Korea and has two subspecies of the Chinese water deer (Hydropotes inermis inermis) and Korean water deer (Hydropotes inermis argyropus). To date, only the Korean water deer has been reported in South Korea. In this study, however, an intraspecific phylogeny and haplotype analysis based on mitochondrial cytochrome oxidase I indicated that both Korean and Chinese water deer are found in South Korea. The populations of the two Korean genetic lineages did not show distinct geographic distributions. Further morphological studies on the Korean water deer will be required to confirm its taxonomic status.

Insights into evolution and speciation in the red alga Bostrychia: 15 years of research

  • Zuccarello, Giuseppe C.;West, John A.
    • ALGAE
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    • v.26 no.1
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    • pp.21-32
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    • 2011
  • Studies of the red algal genus Bostrychia over the last 15 years have made it a model system for many evolutionary processes within red algal species. The combination of newly developed, or first employed methods, in red algal species studies has made Bostrychia a pioneer genus in intraspecific studies. Bostrychia was the first genus in which a mitochondrial marker was used for intraspecific red algal phylogeny, and the first for which a 3-genome phylogeny was undertaken. The genus was the first red alga used to genetically show maternal plastid and mitochondria inheritance, and also to show correlation between cryptic species (genetically divergent intraspecific lineages) and reproductive incompatibility. The chemotaxonomic use, and physiological function of osmolytes, has also been extensively studied in Bostrychia. Our continuous studies of Bostrychia also highlight important aspects in algal species studies. Our worldwide sampling, and resampling in certain areas, show that intensive sampling is needed to accurately assess the genetic diversity and therefore phylogeographic history of algal species, with increased sampling altering evolutionary hypotheses. Our studies have also shown that long-term morphological character stability (stasis) and character convergence can only be correctly assessed with wide geographic sampling of morphological species. While reproductive incompatibility of divergent lineages supports the biological species nature of these lineages, reproductive incompatibility is also seen between isolates with little genetic divergence. It seems that reproductive incompatibility may evolve quickly in red algae and the unique early stages of fertilization (e.g., gametes covered by walls, active movement of spermatium nuclei to the distant egg nucleus), also well investigated in Bostrychia,. may be key to our understanding of this process.

A New Record of the Brittle Star, Amphistigma minuta (Ophiuroidea: Amphilepidida: Amphiuridae), from Jeju Island, Korea

  • Lee, Taekjun;Shin, Sook
    • Animal Systematics, Evolution and Diversity
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    • v.35 no.2
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    • pp.84-90
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    • 2019
  • The brittle star, Amphistigma minuta H.L. Clark, 1938, was collected from Munseom Island, Jeju-do, Korea, by SCUBA diving. This species has distinct morphological features, as follows: a small disk with large papillae on the disk margin; slender arms and four arm spines at proximal; and oral parts the same as those of the genus Amphipholis. Additionally, we obtained partial sequences of the cytochrome c oxidase subunit I gene (COI) (513 bp) and compared them with sequences from Australian A. minuta and 13 other species of Amphiuridae. As a result, intraspecific pairwise distance was 0.4% between two Korean individuals and intraspecific distance between the Australian and the Korean populations was 2.6-2.8%, which indicates they should be considered as the same species. Ultimately, 15 species of the family Amphiuridae have currently been recorded in Korea, including A. minuta.

Marine Gastrotrichs of the Genus Diplodasys (Macrodasyida: Thaumastodermatidae) from Korea

  • Lee, Ji-Min;Chang, Cheon-Young
    • Animal Systematics, Evolution and Diversity
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    • v.22 no.1
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    • pp.109-115
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    • 2006
  • Two marine gastrotrich species are reported from sublittoral sand bottom of Korea: Diplodasys ankeli Wilke, 1954 and D. meloriae Todaro, Balsamo and Tongiorgi, 1992. Both species are redescribed in detail, with the discussion on the intraspecific variability between Korean specimens and the original description or among Korean specimens. The genus Diplodasys is newly recorded from Korea as well as the Northwest Pacific.

Intraspecific sequence variation of trnL/F intergenic region (cpDNA) in Sedum takesimense Nakai (Crassulaceae) and aspects of geographic distribution (섬기린초에서 엽록체 DNA 염기서열의 종내 변이와 지리적 분포 양상 연구)

  • Lee, Woong;Pak, Jae-Hong
    • Korean Journal of Plant Taxonomy
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    • v.40 no.3
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    • pp.157-162
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    • 2010
  • Sequences of the trnL/F intergenic spacer of chloroplast DNA were used to investigate the intraspecific evoution and phylogeography of Sedum takesimense (Crassulaceae). The trnL/F intergeneric spacer sequences from 32 individuals of S. takesimense were either 291 bp (17 samples "without indel" in the following) or 297 bp (15samples "with indel 1") in length due to an indel of 6 bp. Two main cpDNA haplotypes were detected within S. takesimense. The haplotype with indel was found on Ulleung Island and without indel on Ulleung Island and Dok Island. This confirmed the existence of two cpDNA lineages with different geographical distributions. The cpDNA sequence analysis also suggested a putative long-distance dispersal event between Ulleung Island and Dok Island.

Additional Records of the Hydrothermal Vent Scale Worm Branchinotogluma segonzaci (Polynoidae: Lepidonotopodinae) from the North Fiji Basin and Tonga Arc

  • Lee, Won-Kyung;Lee, Geon Hyeok;Ju, Se-Jong;Kim, Se-Joo
    • Animal Systematics, Evolution and Diversity
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    • v.37 no.4
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    • pp.273-279
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    • 2021
  • Branchinotogluma segonzaci (Miura and Desbruyères, 1995) occurs in hydrothermal vent fields of the southwestern Pacific Ocean. We morphologically compared B. segonzaci from the North Fiji Basin with the original description from the Lau Basin and a subsequent study of specimens from the Manus Basin. The main characteristics of all B. segonzaci populations were similar having 21 segments, 10 pairs of elytra, cylindrical-shaped anterior lobes, and ventral papillae on segment 12 and ventral lamellae on segments 13-17 in males. However, the specimens from the North Fiji Basin had rounded to sub-renifrom elytra rather than oval in the original description. Additionally, we newly obtained 11 cytochrome oxidase subunit I (COI) DNA barcodes from the North Fiji Basin and Tonga Arc populations and compared them with known COI DNA barcodes of Branchinotogluma species. Thirteen sequences of B. segonzaci showed 0.0-1.07% intraspecific variation and formed two clades in the COI neighbor-joining tree, whereas the interspecific variation among Branchinotogluma species was 8.19-22.4%. The results of this study contribute to biogeographic studies of B. segonzaci and the evolution of polynoid scale worms in chemosynthesis-based ecosystems.

First Record of Eucephalobus oxyuroides (Nematoda: Rhabditida: Cephalobidae) from South Korea

  • Kim, Taeho;Bae, Yeon Jae;Park, Joong-Ki
    • Animal Systematics, Evolution and Diversity
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    • v.33 no.4
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    • pp.256-261
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    • 2017
  • Eucephalobus oxyuroides (de Man, 1876) Steiner, 1936 belonging to the family Cephalobidae Filpijev, 1934 (Cephalobomorpha) is newly reported from South Korea. This species is distinguished from other Eucephalobus species by its pointed tail terminus, high lips and relatively longer female tail and body. From many previous studies, intraspecific variation in this species has been reported for body length, absence/presence of probolae, and number/position of papillae in the posterior region of male, posing an obstacle for identification and phylogenetic analysis. In this study, details of the morphological characters and morphometric of E. oxyuroides Korean population are described and illustrated based on optical microscopy.

Harpacticoid Copepods of Genus Onychocamptus (Laophontidae) from Korea (한국산 발톱갈고리노벌레속(발톱갈고리노벌레과)의 요각류)

  • Lee Ji Min;Chang Cheon Young
    • Animal Systematics, Evolution and Diversity
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    • v.21 no.1
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    • pp.31-43
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    • 2005
  • Three harpacticoid species of the genus Onychocamptus are reported from the inland waters of South Korea: O. vitiospinulosa (Shen and Tai), O. mohammed (Blanchard and Richard) and O. bengalensis (Sewell). Of these, O. vitiospinulosa and O. mohammed are newly added to Korean copepod fauna. Onychocamptus vitiospinulosa is redescribed. Systematic accounts on the morphological details and the intraspecific variabilities are provided with a key to the Onychocamptus species from Korea.

Phylogenetic relationship of ribosomal ITS2 and mitochondrial COI among diploid and triploid Paragonimus westermani isolates

  • Park, Gab-Man;Im, Kyung-Il;Yong, Tai-Soon
    • Parasites, Hosts and Diseases
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    • v.41 no.1
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    • pp.47-55
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    • 2003
  • We compared patterns of intraspecific polymorphism of two markers with contrasting modes of evolution, nuclear ribosomal DNA (rDNA) and mitochondrial DNA (mtDNA), in the lung fluke, diploid and triploid Paragonimus westermani from three geographical regions of Korea. The genetic distances between three populations of Korean diploid and triploid P. westermani showed no significant difference in the nucleotide sequences of the mitochondrial cytochrome c oxidase subunit 1 (mtCOI) and ribosomaal second internal transcribed spacer (ITS2) genes. A highly resolved strict-consensus tree was obtained that illustrated phylogenetically useful information of the ITS2 and mtCOI sequences from diploid and triploid P. westermani.

DNA Barcoding of Six Diogenid Species (Crustacea: Decapoda: Paguroidea) in Korea

  • Jung, Jibom;Kim, Won
    • Animal Systematics, Evolution and Diversity
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    • v.35 no.4
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    • pp.182-185
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    • 2019
  • In this study, cytochrome c oxidase subunit I(COI) sequences of 17 individuals from six Korean diogenid species(i.e., 2 Areopaguristes japonicus, 4 A. nigroapiculus, 3 Paguristes digitalis, 4 P. ortmanni, 3 Diogenes edwardsii, and 1 Ciliopagurus kempfi) were determined and analyzed. The DNA barcoding results of this study were consistent with the morphological identification of these six species. Interspecific variations of COI sequences within six Korean diogenid species exceeded the minimum interspecific variation of diogenid hermit crabs in previous studies. Little intraspecific variation exists except for P. digitalis. This study should facilitate further molecular taxonomy of East Asian diogenids.