• Title/Summary/Keyword: information mapping

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Genetic diversity and population structure among accessions of Perilla frutescens (L.) Britton in East Asia using new developed microsatellite markers

  • Sa, Kyu Jin;Choi, Ik?Young;Park, Kyong?Cheul;Lee, Ju Kyong
    • Genes and Genomics
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    • v.40 no.12
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    • pp.1319-1329
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    • 2018
  • SSRs were successfully isolated from the Perilla crop in our current study, and used to analyze Perilla accessions from East Asia. Analyses of the clear genetic diversity and relationship for Perilla crop still remain insufficient. In this study, 40 new simple sequence repeat (SSR) primer sets were developed from RNA sequences using transcriptome analysis. These new SSR markers were applied to analyze the diversity, relationships, and population structure among 35 accessions of the two cultivated types of Perilla crop and their weedy types. A total of 220 alleles were identified at all loci, with an average of 5.5 alleles per locus and a range between 2 and 10 alleles per locus. The MAF (major allele frequency) per locus varied from 0.229 to 0.943, with an average of 0.466. The average polymorphic information content (PIC) value was 0.603, ranging from 0.102 to 0.837. The genetic diversity (GD) ranged from 0.108 to 0.854, with an average of 0.654. Based on population structure analysis, all accessions were divided into three groups: Group I, Group II and the admixed group. This study demonstrated the utility of new SSR analysis for the study of genetic diversity and population structure among 35 Perilla accessions. The GD of each locus for accessions of cultivated var. frutescens, weedy var. frutescens, cultivated var. crispa, and weedy var. crispa were 0.415, 0.606, 0.308, and 0.480, respectively. Both weedy accessions exhibited higher GD and PIC values than their cultivated types in East Asia. The new SSR primers of Perilla species reported in this study may provide potential genetic markers for population genetics to enhance our understanding of the genetic diversity, genetic relationship and population structure of the cultivated and weedy types of P. frutescens in East Asia. In addition, new Perilla SSR primers developed from RNA-seq can be used in the future for cultivar identification, conservation of Perilla germplasm resources, genome mapping and tagging of important genes/QTLs for Perilla breeding programs.

Extraction of UAV Image Sharpness Index Using Edge Target Analysis (에지 타겟 분석을 통한 무인기 영상의 선명도 지표 추출)

  • Lim, Pyung-Chae;Seo, Junghoon;Kim, Taejung
    • Korean Journal of Remote Sensing
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    • v.34 no.6_1
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    • pp.905-923
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    • 2018
  • In order to generate high-resolution products using UAV images, it is necessary to analyze the sharpness of the themselves measured through image analysis. When images that have unclear sharpness of UAV are used in the production, they can have a great influence on operations such as acquisition and mapping of accurate three-dimensional information using UAV. GRD (Ground Resolved Distance) has been used as an indicator of image clarity. GRD is defined as the minimum distance between two identifiable objects in an image and is used as a concept against the GSD (Ground Sampling Distance), which is a spatial sample interval. In this study, GRD is extracted by analyzing the edge target without visual analysis. In particular, GRD to GSD ratio (GRD/GSD), or GRD expressed in pixels, is used as an index for evaluation the relative image sharpness. In this paper, GRD is calculated by analyzing edge targets at various altitudes in various shooting environments using a rotary wing. Using GRD/GSD, it was possible to identify images whose sharpness was significantly lowered, and the appropriateness of the image as an image clarity index was confirmed.

SOC Project Plans and Cultural Resource Management in the North Korean Region : Suggestions for Systematic Investigation and Management of North Korean Cultural Heritage (북한지역 SOC사업 구상과 문화유산 - 북한 문화유산의 효율적인 조사·관리를 위한 제언 -)

  • Kim, Beom-Cheol
    • Korean Journal of Heritage: History & Science
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    • v.52 no.2
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    • pp.4-19
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    • 2019
  • Despite continuous volatility in ideological leanings, South Korean governments, conservative or progressive, have published a series of plans for aiding the economic development of North Korea. The Moon administration's plan is the paragon of such efforts. In addition, recent detente between the North Korean regime and the US government evokes much hope in its success. There is, hidden behind the veil of hope, apprehension about the crisis of management of cultural heritage in the North Korean region. It is believed that development policies may overwhelm efforts at conservation of cultural heritage, in particular that the hurrying of development projects would provoke insufficient and inappropriate investigation of archaeological sites., If these problems arise, responsibility for their resolution would be carried by South Korean archaeologists and governmental institutes. This paper reviews what the South Korean government has suggested for North Korea's economic recovery and examines what capability the South Korean archaeology sector has for investigating North Korean cultural heritage. It then discusses the scale of investigation needed, and what should beused as precedent in planning substantial excavations when development projects are performed in the North Korean region. Constructing a digital map system for cultural heritage of North Korea is suggested as one of the most urgent tasks precedent to substantial excavations. It is of great importance because we do not currently have any substantial information about the locations and current condition of cultural heritage sites and artifacts in the North Korean region. The mapping of Bronze Age sites in North Korea, conducted as a sort of pilot test, revealed that archaeological sites are densely distributed in several regions, especially Hwanghae-do and Pyoyang Directly-Administrated City, and that there is high potential of discovering new sites.

The Status of Damage and Monitoring of Subterranean Termite (Reticulitermes spp.) (Blattodea: Rhinotermitidae) for Wooden Cultural Heritage in Korea (국내 목조문화재에 대한 지중 흰개미 피해 및 모니터링 현황)

  • Im, Ik-Gyun;Cha, Hyun-Seok;Kang, Won-Chul;Lee, Sang-Bin;Han, Gyu-Seong
    • Journal of Conservation Science
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    • v.37 no.3
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    • pp.191-208
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    • 2021
  • In this study, the status of damage by subterranean termites and their management according to the region and type of domestic wooden cultural properties were identified. This was based on the survey reports of agencies conducting regular nationwide and regional monitoring of subterranean termites. In addition, using geographical information system (GIS) based on the survey contents, a map was constructed of termite infestation and its progress on 2,805 wooden cultural properties that were surveyed nationwide. Based on the map produced, a total of 486 cases of termite infestation were confirmed in wooden cultural properties during 2018-2019, of which 143 cases (approximately 29.4%) were confirmed to be owing to the invasion of termites in the ground and infestation of wood materials. A web platform and an application using a mapping application program interface were created to increase accessibility to the investigated damage status data. The methods employed by each institution for investigating and monitoring the invasion of termites in the ground included the use of detection dogs, visual observation, installation of wood specimens made of pine, and microwave equipment. However, it was confirmed that monitoring and survey methods were not applied to determine the territorial range of the subterranean termite colonies. Accordingly, the use of dyeing and mark-release-recapture methods were deemed necessary to understand the current status, such as calculating the scope of the target wooden cultural property, when monitoring subterranean termite colonies.

Analysis of the Genome Sequence of Strain GiC-126 of Gloeostereum incarnatum with Genetic Linkage Map

  • Jiang, Wan-Zhu;Yao, Fang-Jie;Fang, Ming;Lu, Li-Xin;Zhang, You-Min;Wang, Peng;Meng, Jing-Jing;Lu, Jia;Ma, Xiao-Xu;He, Qi;Shao, Kai-Sheng;Khan, Asif Ali;Wei, Yun-Hui
    • Mycobiology
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    • v.49 no.4
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    • pp.406-420
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    • 2021
  • Gloeostereum incarnatum has edible and medicinal value and was first cultivated and domesticated in China. We sequenced the G. incarnatum monokaryotic strain GiC-126 on an Illumina HiSeq X Ten system and obtained a 34.52-Mb genome assembly sequence that encoded 16,895 predicted genes. We combined the GiC-126 genome with the published genome of G. incarnatum strain CCMJ2665 to construct a genetic linkage map (GiC-126 genome) that had 10 linkage groups (LGs), and the 15 assembly sequences of CCMJ2665 were integrated into 8 LGs. We identified 1912 simple sequence repeat (SSR) loci and detected 700 genes containing 768 SSRs in the genome; 65 and 100 of them were annotated with gene ontology (GO) terms and KEGG pathways, respectively. Carbohydrate-active enzymes (CAZymes) were identified in 20 fungal genomes and annotated; among them, 144 CAZymes were annotated in the GiC-126 genome. The A mating-type locus (MAT-A) of G. incarnatum was located on scaffold885 at 38.9 cM of LG1 and was flanked by two homeodomain (HD1) genes, mip and beta-fg. Fourteen segregation distortion markers were detected in the genetic linkage map, all of which were skewed toward the parent GiC-126. They formed three segregation distortion regions (SDR1-SDR3), and 22 predictive genes were found in scaffold1920 where three segregation distortion markers were located in SDR1. In this study, we corrected and updated the genomic information of G. incarnatum. Our results will provide a theoretical basis for fine gene mapping, functional gene cloning, and genetic breeding the follow-up of G. incarnatum.

A Study on the Deriving of Areas of Concern for Crime using the Mental Map (멘탈 맵을 이용한 범죄발생 우려 지역 도출에 관한 연구)

  • Park, Su Jeong;Shin, Dong Bin
    • Journal of the Korean Society of Surveying, Geodesy, Photogrammetry and Cartography
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    • v.37 no.3
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    • pp.177-188
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    • 2019
  • Recently, citizens are feeling anxious as 'Motiveless Crime' increases. The quality of citizens life is degraded and the degree of crime fear is increasing. In this study, based on various variables related to crime other than actual crime occurrence status, crime occurrence points (point line polygon) felt by citizens are created by using mental map methodology. And the purpose of this study is to derive the area of concern for crime through spatial overlap analysis using kernel density estimation analysis. It also uses spatial overlay analysis using kernel density estimation to derive areas of concern for crime occurrence. As a result, the local residents' request point and the areas of concern for crime were overlapped. In addition, the mental map indicating the fear of crime was constructed by mapping mainly the areas between the facilities, the non-construction area such as the narrow area, the security CCTV, the streetlight. This study is meaningful in that it tried to derive a crime occurrence concern area by using mental map method unlike the previous study related to crime. The results of this study, such as mental map, could be used in various fields such as construction of fragile crime map, guideline of crime prevention through environment design.

Development of 3D Addressing Data Model Based on the IndoorGML (IndoorGML 기반 입체주소 데이터 모델 개발)

  • Kim, JI Young
    • Journal of the Korean Society of Surveying, Geodesy, Photogrammetry and Cartography
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    • v.38 no.6
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    • pp.591-598
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    • 2020
  • The all revision of the Road Name Address Act, which contains the contents to be used by expanding the road name address as a means of indicationg the location, has been resloved by the National Assembly. Addresses will be assigned to large-sized facilities (3D mixed-use complex spaces). Here, the 3D (Three-dimensional) address is assigned an indoor path section in the inner passage, dividing the section at intervals. The 3D address will be built on the address information map. For 3D address, data should be built and managed for a 3D complex space(indoor space). Therefore, in this study, the object of the 3D address is defined based on the address conceptual model defined in the international standard, and the 3D address data model is proposed based on IndoorGML. To this, it is proposed as a method of mapping the Core and Navigation module of IndoorGML so that the entity of the 3D address can be expressed in IndoorGML. This study has a limitation in designing a 3D address data model only, but it is meaningful that it suggested a standard for constructing 3D address data in the future.

Implementation of a citizen-driven smart city living lab community platform to improve pedestrian environment of school zone (스쿨존 보행환경 개선을 위한 시민참여형 스마트시티 리빙랩 커뮤니티 플랫폼 구현)

  • Jang, Sun-Young;Kim, Dusik
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.22 no.1
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    • pp.415-423
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    • 2021
  • Citizen participation and Living Lab are attracting interest as one of the major strategies for the success of smart cities. In a Living Lab, citizens, who are the end-users of technology, participate in the search for alternatives to define and solve problems and repeat experiments to verify alternatives in a circular process. The purpose of this research was to present an operating model of a citizen-participating online community platform to improve urban problems, implement and test it, and show its applicability. To this end, an operation model of a citizen-participating online community platform was proposed to improve urban problems. An online platform was designed and implemented to reflect the functions pursued by the operation model. Finally, a pilot test for the function was performed using the Oma Elementary School case located in Ilsan, Goyang-si, Gyeonggi-do. The operating model was designed with the city's pedestrian environment and children. As a result, the sharing and communicating process of urban issues among community members worked appropriately according to the designed intention. The Living Lab coordinator could visualize and view urban issues posted by users on a map based on location information. Visualizing the urban problem as a heat map confirmed that urban problems were concentrated in a specific area.

Sentiment Analysis using Robust Parallel Tri-LSTM Sentence Embedding in Out-of-Vocabulary Word (Out-of-Vocabulary 단어에 강건한 병렬 Tri-LSTM 문장 임베딩을 이용한 감정분석)

  • Lee, Hyun Young;Kang, Seung Shik
    • Smart Media Journal
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    • v.10 no.1
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    • pp.16-24
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    • 2021
  • The exiting word embedding methodology such as word2vec represents words, which only occur in the raw training corpus, as a fixed-length vector into a continuous vector space, so when mapping the words incorporated in the raw training corpus into a fixed-length vector in morphologically rich language, out-of-vocabulary (OOV) problem often happens. Even for sentence embedding, when representing the meaning of a sentence as a fixed-length vector by synthesizing word vectors constituting a sentence, OOV words make it challenging to meaningfully represent a sentence into a fixed-length vector. In particular, since the agglutinative language, the Korean has a morphological characteristic to integrate lexical morpheme and grammatical morpheme, handling OOV words is an important factor in improving performance. In this paper, we propose parallel Tri-LSTM sentence embedding that is robust to the OOV problem by extending utilizing the morphological information of words into sentence-level. As a result of the sentiment analysis task with corpus in Korean, we empirically found that the character unit is better than the morpheme unit as an embedding unit for Korean sentence embedding. We achieved 86.17% accuracy on the sentiment analysis task with the parallel bidirectional Tri-LSTM sentence encoder.

Seismic Vulnerability Assessment and Mapping for 9.12 Gyeongju Earthquake Based on Machine Learning (기계학습을 이용한 지진 취약성 평가 및 매핑: 9.12 경주지진을 대상으로)

  • Han, Jihye;Kim, Jinsoo
    • Korean Journal of Remote Sensing
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    • v.36 no.6_1
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    • pp.1367-1377
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    • 2020
  • The purpose of this study is to assess the seismic vulnerability of buildings in Gyeongju city starting with the earthquake that occurred in the city on September 12, 2016, and produce a seismic vulnerability map. 11 influence factors related to geotechnical, physical, and structural indicators were selected to assess the seismic vulnerability, and these were applied as independent variables. For a dependent variable, location data of the buildings that were actually damaged in the 9.12 Gyeongju Earthquake was used. The assessment model was constructed based on random forest (RF) as a mechanic study method and support vector machine (SVM), and the training and test dataset were randomly selected with a ratio of 70:30. For accuracy verification, the receiver operating characteristic (ROC) curve was used to select an optimum model, and the accuracy of each model appeared to be 1.000 for RF and 0.998 for SVM, respectively. In addition, the prediction accuracy was shown as 0.947 and 0.926 for RF and SVM, respectively. The prediction values of the entire buildings in Gyeongju were derived on the basis of the RF model, and these were graded and used to produce the seismic vulnerability map. As a result of reviewing the distribution of building classes as an administrative unit, Hwangnam, Wolseong, Seondo, and Naenam turned out to be highly vulnerable regions, and Yangbuk, Gangdong, Yangnam, and Gampo turned out to be relatively safer regions.