• Title/Summary/Keyword: genus diversity

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Genetic Diversity and Phylogenetic Relationship of Genus Phyllostachys by RAPD Markers (RAPD분자 마커를 이용한 왕대속 대나무의 유전적 다양성 및 계통 관계)

  • Lee, Song-Jin;Huh, Man-Kyu;Shin, Hyun-Cheol;Huh, Hong-Wook
    • Journal of Life Science
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    • v.20 no.6
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    • pp.819-824
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    • 2010
  • Genus Phyllostachys is a long-lived woody species primarily distributed throughout South East Asia. Many species of this genus has been regarded as medically and ecologically important in the world. We evaluated representative samples of the four taxa with RAPD to estimate genetic relationships within the genus Phyllostachys. The percentages of polymorphic loci were 8.9-33.3% at the species level. P. bambusoides was found to show lower genetic diversity (H=0.018) than other species. Total genetic diversity ($H_T$) was 0.315, genetic diversity within populations ($H_S$) was 0.043, the proportion of total genetic diversity partitioned among populations ($G_{ST}$) was 0.659 and the gene flow (Nm) was 0.0263. As some Korean populations were isolated and patchily distributed, they exhibited low levels of genetic diversity. The four taxa of the genus Phyllostachys analyzed were distinctly related to a monophyletic. P. nigra var. henonis. Stapf was found to be more closely related to P. pubescens than to P. nigra. P. bambusoides was quite distinct from the remaining species.

Genetic Diversity and Phylogenetic Relationship of Genus Phyllostachys by ISSR Markers (ISSR 분자 마커를 이용한 왕대속 대나무의 유전적 다양성 및 계통 관계)

  • Lee, Song-Jin;Huh, Man-Kyu;Huh, Hong-Wook
    • Journal of Life Science
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    • v.17 no.11
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    • pp.1482-1487
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    • 2007
  • Four taxa of the genus Phyllostachys were analysed with PCR-based molecular inter-simple sequence repeat (ISSR) determine markers to determine their phylogenetic relationships. Many species of this genus are regarded as economical and ecologically important in the world. With the nine primers screened, ISSR assay generated a total of 64 reproducible bands. Analysis of ISSR from individual plants of genus Phyllostachys resulted in 43 polymorphic bands with 70.49%. When species were grouped by four taxa, within group diversity was 0.092 (Hs), while among group diversify was 0.499 (Gst) on a per locus basis. The estimated gene flow (Nm) between the pairs of species was 0.559. Hence, we can expect weak or low gene flow among species. Total mean genetic diversity ($H_T$) for four taxa was 0.291. The ISSR data allowed us to resolve well-supported clades in the genus Phyllostachys. The four taxa of the genus Phyllostachys analyzed were distinctly related to a monophyletic.

Meiotic chromosome numbers of five Carex taxa in Korea (Cyperaceae)

  • CHUNG, Kyong-Sook;IM, Hyoung-Tak
    • Korean Journal of Plant Taxonomy
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    • v.48 no.3
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    • pp.201-205
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    • 2018
  • Carex L. (Cyperaceae) is the largest angiosperm genus in the temperate zones with more than 2,000 species worldwide. Unusual chromosome structures, called holocentric chromosomes, have been postulated to contribute to species diversity in the genus. In Korea, this genus has the greatest number of species, but chromosome information as it pertains to the taxa is mostly unknown. Here, we report meiotic chromosome numbers of five Carex taxa in Korea. The following observations are made: Carex jaluensis Kom. ($n=27_{II}$, $28_{II}$, $29_{II}$, $30_{II}$), C. japonica Thunb. ($n=28_{II}$, $29_{II}$), C. planiculmis Kom. ($n=30_{II}$), C. miyabei Franch. ($n=33_{II}$, $36_{II}$), C. neurocarpa Maxim. ($n=51_{II}$, $53_{II}$, $54_{II}$). Except for C. planiculmis, all of the species exhibit variations in chromosome numbers within individuals and/or taxa. The findings with regard to chromosome number diversity in Carex suggest that chromosome number variation (aneuploidy, agmatoploidy and/or symploidy) plays an important role in the richness of the species in the genus. Further cytological investigations are needed for a better understanding of sedge diversity in Korean flora.

Genus Diversity of Soil Actinomycetes Isolated from Natural Lime Cave. (자연 석회동굴에서 분리한 방선균의 속 다양성)

  • 박동진;이상화;박해룡;권오성;박상호;마사카즈우라모토;김창진
    • Microbiology and Biotechnology Letters
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    • v.28 no.3
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    • pp.129-133
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    • 2000
  • Different actinomycete strains were isolated from natural lime caves of Ondal Chemongok Hwanseon and Yongyeon which are located at Kangwon or chungcheongbook province in Korea and were identified to the genus level. Soil sam-ples were collected at 6 sites inside and 2 sites outside of each natural lime cave, As the result the strains belonging to genus Streptomyces and rare actinomycetes were isolated at the average of 2.1 and 3.4 strains per g soil on inside cave whereas which were isolated at the 6.0 and 1.8 strains per g soil on outside cave. How-ever the generic distribution of Streptomyces and rare actinomycetes isolated from outside cave was quite dif-ferent from that of inside cave. It was shown that rare actinomycetes at natural lime caves is generally highly abundant than Streptomyces.

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Diversity of Actinomycetes - Species, morphology and life cycle - (방선균의 다양성 -종류, 형태 및 생활환-)

  • 아끼라시마즈;김창진;유익동
    • Microbiology and Biotechnology Letters
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    • v.21 no.1
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    • pp.88-94
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    • 1993
  • Actinomycetes are the most diverse group of bacteria. in variety. morphology. and life cycle. Especially. the variety of genus and species of Actinomycetes is so diverse among other microorganisms that about 50 genus of Actinomycetes have been reported until now. Among them. Streptomyces genus is the most plentiful and over 220 species have been reported. The number of the genus of Actinomycetes will be expected to be fixed to about 55 genus and 250 Streptomyces species in the year 2000 thereabouts. Morphological and physiological characters of Actinomycetes varies with culture condition. and therefore diverse life cycles are also possible. In this paper. life cycles of the representative Actinomycetes, Nocardia, Streptomyces. Kitasatosporia. GeodermatoPhi/us. and Sporichthya. according to the condition of nutrient in the media were reviewed.

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Genetic Diversity and Relationship of Genus Spiraea by Random Amplified Polymorphic DNA Markers (조팝나무속 분류군의 RAPD에 의한 유전적 다양성과 관련성)

  • Huh, Man-Kyu
    • Journal of Life Science
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    • v.20 no.7
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    • pp.983-990
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    • 2010
  • Genus Spiraea is a woody species primarily distributed throughout Asia. Many species of this genus are important plants medicinally and ecologically. I evaluated a representative sample of the sixteen taxa with random amplified polymorphic DNA (RAPD) markers to estimate genetic relationships within genus Spiraea. In addition, RAPD analysis was also conducted to estimate the genetic diversity and population structure of these species. As the typical populations of Spiraea were small, isolated, and patchily distributed for natural populations, they maintained a low level of genetic diversity for polymorphic primers. The mean H was 0.117 across species. The Korean endemic species (S. chartacea) and patchily distributed species (S. betulifolia) showed fewer alleles per locus (mean 1.240 vs. 1.297), lower percent polymorphic locus (24.0 vs. 29.7), and lower diversity (0.092 vs. 0.121) than a relatively widely spread species. An assessment of the proportion of diversity present within species, $H_{POP}/H_{SP}$, indicated that about 87.8% the total genetic diversity was among species. Thus, the majority of genetic variation (87.8%) resided within species. The phylogenic tree showed three distinct groups. One clade includes S. prunifolia for. simpliciflora, S. thunbergii, S. chamaedryfolia var. ulmifolia, S. media, and S. cantoniensis. Another clade includes S. blumei, S. pubescens, S. chartacea, and S. chinensis. The other clade is the remaining seven species.

Taxonomic Review of the Genus Plectiscidea (Hymenoptera: Ichneumonidae: Orthocentrinae) from South Korea

  • Choi, Jin-Kyung;Lee, Jong-Wook
    • Animal Systematics, Evolution and Diversity
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    • v.36 no.1
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    • pp.85-90
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    • 2020
  • The three newly recognized species of the genus Plectiscidea are reported in this: Plectiscidea aquilonia Humala, 2003, Plectiscidea bistriata (Thomson, 1888), and Plectiscidea collaris(Gravenhorst, 1829). Among them, P. bistriata is recorded for the first time in the Eastern Palaearctic region and this genus is reported for the first time from South Korea. A key to species of this genus and and photographs of each species are provided.

Hamaticyclops ahni, a New Genus and Species of the Family Clausidiidae (Crustacea, Copepoda, Poecilostomatoida) from California, United States

  • Kim, Il-Hoi
    • Animal Systematics, Evolution and Diversity
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    • v.31 no.4
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    • pp.304-310
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    • 2015
  • Hamaticyclops ahni is described as a new genus and species from the Californian shore of the United States. It was discovered as a victim of the sea anemone Anthopleura elegantissima (Brandt). The new genus is closely related to the genus Hemicyclops but possesses, as significant autapomorphies, three strong claws on the second endopodal segment of antenna and a markedly elongate exopod of leg 5 with its protopod fused to somite.

Genus Diversity of Actinomycetes Isolated from the Sediments in Lake Daechung (대청호 퇴적층으로부터 분리된 방선균의 속 다양성)

  • Park, Dong-Jin;Yuk, Youn-Su;Park, Hae-Ryong;Piao, Zhe;Lee, Sang-Hwa;Kim, Chang-Jin
    • Microbiology and Biotechnology Letters
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    • v.27 no.4
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    • pp.273-277
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    • 1999
  • From each sediments collected at Chudong(static) and Hoenam(streaming) site of Lake Daechung on May 18(before rainy season) and on August 24 in 1998(after rainy season), different strains of Actinomycetes were isolated and identified to genus level. For comparison, the genus diversity of Actinomycetes in control soils such as grass land around lake, lake shore, and shallow(5-10cm) lake was also investigated. In consequence, the isolation of Streptomyces from the sediments of Lake Daechung was the most copious(41 strains) at the streaming site before rainy season and the least(27 strains) at the static site before rainy season, which were 2.4- and 1.6-fold larger than the average(17 strains) of control soils, respectively. In addition, the isolation of rare Actinomycetes from the sediments of Lake Daechung was the most copious(23 strains) at the streaming site before rainy season and the least(12 strains) at the static site after rainy season, which were 3.2-and 1.6-fold larger than the average(17 strain) of controls, respectively. Therefore, it is considered that lake sediments exhibit higher diversity of Streptomycete as well as rare Actinomycetes than general soils, and thereby can be utilized as useful sources to isolate diverse Actinomycetes.

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